AT17606.complete Sequence
625 bp (625 high quality bases) assembled on 2002-04-26
GenBank Submission: AY113276
> AT17606.complete
ATTTTTGTAATTTATTCTAATTTACAATAAGCTAAACGTTAAACATTTCA
ATACCGTCAACAAGTGATTAATCATGGATGACACATTATCAACGGTAGAA
GGCGGGATGACGGAAACATCCTCATGGAGCACCACGATCGCCACCACCAC
CACTACAGAGGCCGCCAAGGCGGGTAGCATGGCTGTCGGTATTATTGTCC
TGATCGTTGTTATGGTGCTCCTCTGCTGCCTGCTCATCATCTGCCTGCCG
CTCCTCTGCCTGTGCGGCTGTTGCGGACTCGCCTGCTCCGCGTGCCTCGC
TTGCGACGAAGGATGTTGTGGTGAAGGCGGCGGCGGTGGATGTTGCGGCG
ATGACGGCGGTGGATGTTGCGGCGATGGCGGCGGGTGTGGCGATTGTGGC
GACGGCTGTGGGGACTGCACCTTGGACGATGATTAATTCGGCGATAATTC
AAGTTTCTATTAATATGTACGTAGTGCTAGGATATGCGATTCGAAAGCCT
ATAAATTTAATGTGCTCAGGTACAGATTCGTTAGGAGCATCCGTATGCTC
ATTGGCAAAATTGTTGTCTATTCATAAAAAATAAAAAAATCTAGCTTAAT
TTTGAAAAAAAAAAAAAAAAAAAAA
AT17606.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 20:55:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13494-RA | 608 | CG13494-RA | 1..607 | 1..607 | 3035 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 12:41:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 17840585..17841188 | 604..1 | 2960 | 99.3 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:51:50 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 12:41:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21954239..21954845 | 607..1 | 3035 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:14:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 21955438..21956044 | 607..1 | 3035 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 12:41:52 has no hits.
AT17606.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 12:42:37 Download gff for
AT17606.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 17840585..17840777 | 412..604 | 100 | == | Minus |
chr2R | 17840872..17841188 | 1..317 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:10:58 Download gff for
AT17606.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 1..363 | 74..436 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:53:19 Download gff for
AT17606.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 1..363 | 74..436 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 13:56:25 Download gff for
AT17606.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 1..363 | 74..436 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:35:45 Download gff for
AT17606.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 1..363 | 74..436 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:52:02 Download gff for
AT17606.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 1..363 | 74..436 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:05:27 Download gff for
AT17606.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 1..604 | 1..604 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:53:19 Download gff for
AT17606.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 1..604 | 1..604 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:56:25 Download gff for
AT17606.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 1..604 | 1..604 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:35:45 Download gff for
AT17606.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 1..604 | 1..604 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:52:02 Download gff for
AT17606.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 1..604 | 1..604 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:42:37 Download gff for
AT17606.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21954242..21954845 | 1..604 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:42:37 Download gff for
AT17606.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21954242..21954845 | 1..604 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:42:37 Download gff for
AT17606.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21954242..21954845 | 1..604 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:56:25 Download gff for
AT17606.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17841747..17842350 | 1..604 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:18:17 Download gff for
AT17606.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21955441..21956044 | 1..604 | 100 | | Minus |
AT17606.pep Sequence
Translation from 73 to 435
> AT17606.pep
MDDTLSTVEGGMTETSSWSTTIATTTTTEAAKAGSMAVGIIVLIVVMVLL
CCLLIICLPLLCLCGCCGLACSACLACDEGCCGEGGGGGCCGDDGGGCCG
DGGGCGDCGDGCGDCTLDDD*
AT17606.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:25:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13494-PA | 120 | CG13494-PA | 1..120 | 1..120 | 686 | 100 | Plus |
AT17606.hyp Sequence
Translation from 73 to 435
> AT17606.hyp
MDDTLSTVEGGMTETSSWSTTIATTTTTEAAKAGSMAVGIIVLIVVMVLL
CCLLIICLPLLCLCGCCGLACSACLACDEGCCGEGGGGGCCGDDGGGCCG
DGGGCGDCGDGCGDCTLDDD*
AT17606.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:02:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13494-PA | 120 | CG13494-PA | 1..120 | 1..120 | 686 | 100 | Plus |