BDGP Sequence Production Resources |
Search the DGRC for AT17625
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 176 |
Well: | 25 |
Vector: | pOTB7 |
Associated Gene/Transcript | mTTF-RA |
Protein status: | AT17625.pep: gold |
Preliminary Size: | 1442 |
Sequenced Size: | 1515 |
Gene | Date | Evidence |
---|---|---|
CG18124 | 2002-01-01 | Sim4 clustering to Release 2 |
CG18124 | 2002-01-09 | Blastp of sequenced clone |
CG18124 | 2003-01-01 | Sim4 clustering to Release 3 |
mTTF | 2008-04-29 | Release 5.5 accounting |
mTTF | 2008-08-15 | Release 5.9 accounting |
mTTF | 2008-12-18 | 5.12 accounting |
1515 bp (1515 high quality bases) assembled on 2002-01-09
GenBank Submission: AY075225
> AT17625.complete GGCCCACTTGGTCAGCTGTTTATCGCCGCAACATATCAGCTGTTTTCCGC TTGTTTTATAAGTTGAAGAACTTTATTTTCTGTCTTGATTCTGTAAATTA AGCAAATTCGGGATGATTAGAAGCCTTCTGCGCAGCTTTGAGACGGCACT CAAGCTGCATGCCGGCTTAAATATGCACCCAATGCACTGCAGCAGGCGCC TACTCTTCTCGCAGTACGAAAACCGCGCCAGTCCGAGCAGACTGACCTCC AGTGGCACTTTAGGTAGCAACGAGGCGGAAAACGATTATGTGCCTTATCG CCAGGATCGGGAGACTGGAACCAAGACGCGGGTGCTCCTCGAAGCTCTGC GGGAACGTTTTCGCTTCACGGACGCTGAGCTCCAAAAGATAATCAGCGAC GAGCTGGTGCACCGCTGCTACCGCGGTAGATCACTGACTCTGGTCATGGA CACACTGCAGCTAGAGGGCGTTAGCAGGCGCAGCTTCGTGGAGTATCCTT GGCTACTGTCGCTGGACAATAAACGCTTGGAGCTAAAGATGCAGCTACTC AAGTCAATGGACTTTAAGGACATCAATCATTTTGTGCCTTTCCTGCGCCT CACTGTTCCACGTCTTCGAAAACTGGTGGGTGCTCTGAACTCTGAGAGGG ATGCAATGCCACAGCGAAATCGTGTCTACTATATCAGCGAAAAGCTGGAT GTCAGCCCCGATATTGTGAGCAAATATCTATCGAAGAGGCTGTTTATCCT GGAAATGCCGTTCGAGATGTTCGAAAAGAACCTGCAGCACATGATCGACT ACAATGTGTCGCCAATAAACGTACTCAAGGATCTATGGGCCTTTCGCTAT ACTCCAAAGTCTGTTCAGTTGCGTTTGGAGCGCGCCAAGCGGGCGAAAAA GGACAAGATCATGCCGTGGATGGTGCGCTGCCCGGAGCCAATACTGCAGC GCTCCCTGAAGCTTTCTCTCGACGAACTGAAGGTTTTGGGAGAGTTCTCC TCCGTGGTGGAATACTTAGCGCATCGTCTTGGTTTCAGCACCAGTGAAGC CAAGGCAATCATGGACAAACATCCGCAGGTGCACACCGTGCGAGTTACCA AGATCAAAGAGGTGCTAGACTACCTACTCGATGAGGCCCAGTTTACCAGA TTTGAGGTCGCTCAAAATCCTCGAATTCTATGCCACAGCCTGAAAACCAC AAAGGAGCGCATGGAAGAACTGAAATCGCACGGTTGTCGACCCTCCTCTC TTGTAATTCTTTGCCGCAGCCGGAGGGAGTACGATAAGTTTTTGCAGAAC TGGATAAGCCATGAAAGAAATCCGCAAAGTGTATCAGAAGGATGATGAAC TGACGAATGACCTGATGCCATCACCGTGAAAGCTTAAAAAGTTGTTGTAA AGTTAAGATACTTTTTTCAAAAGTTTTGCCACGAAATTGAACACGATTAA AAGCCAATATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mTTF-RA | 1584 | mTTF-RA | 105..1572 | 1..1468 | 7340 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 14346453..14347033 | 1102..522 | 2905 | 100 | Minus |
chr2L | 23010047 | chr2L | 14347098..14347618 | 521..1 | 2605 | 100 | Minus |
chr2L | 23010047 | chr2L | 14346038..14346399 | 1462..1101 | 1810 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 14347653..14348233 | 1102..522 | 2905 | 100 | Minus |
2L | 23513712 | 2L | 14348298..14348818 | 521..1 | 2605 | 100 | Minus |
2L | 23513712 | 2L | 14347232..14347599 | 1468..1101 | 1840 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 14347653..14348233 | 1102..522 | 2905 | 100 | Minus |
2L | 23513712 | 2L | 14348298..14348818 | 521..1 | 2605 | 100 | Minus |
2L | 23513712 | 2L | 14347232..14347599 | 1468..1101 | 1840 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 14346038..14346397 | 1103..1462 | 100 | <- | Minus |
chr2L | 14346453..14347033 | 522..1102 | 100 | <- | Minus |
chr2L | 14347098..14347618 | 1..521 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mTTF-RA | 1..1233 | 113..1345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mTTF-RA | 1..1233 | 113..1345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mTTF-RA | 1..1233 | 113..1345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mTTF-RA | 1..1233 | 113..1345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mTTF-RA | 1..1233 | 113..1345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mTTF-RA | 1..1462 | 1..1462 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mTTF-RA | 1..1462 | 1..1462 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mTTF-RA | 1..1433 | 29..1461 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mTTF-RA | 1..1462 | 1..1462 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mTTF-RA | 1..1433 | 29..1461 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 14347238..14347597 | 1103..1462 | 100 | <- | Minus |
2L | 14347653..14348233 | 522..1102 | 100 | <- | Minus |
2L | 14348298..14348818 | 1..521 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 14347238..14347597 | 1103..1462 | 100 | <- | Minus |
2L | 14347653..14348233 | 522..1102 | 100 | <- | Minus |
2L | 14348298..14348818 | 1..521 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 14347238..14347597 | 1103..1462 | 100 | <- | Minus |
2L | 14347653..14348233 | 522..1102 | 100 | <- | Minus |
2L | 14348298..14348818 | 1..521 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 14347238..14347597 | 1103..1462 | 100 | <- | Minus |
arm_2L | 14347653..14348233 | 522..1102 | 100 | <- | Minus |
arm_2L | 14348298..14348818 | 1..521 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 14347238..14347597 | 1103..1462 | 100 | <- | Minus |
2L | 14347653..14348233 | 522..1102 | 100 | <- | Minus |
2L | 14348298..14348818 | 1..521 | 100 | Minus |
Translation from 112 to 1344
> AT17625.hyp MIRSLLRSFETALKLHAGLNMHPMHCSRRLLFSQYENRASPSRLTSSGTL GSNEAENDYVPYRQDRETGTKTRVLLEALRERFRFTDAELQKIISDELVH RCYRGRSLTLVMDTLQLEGVSRRSFVEYPWLLSLDNKRLELKMQLLKSMD FKDINHFVPFLRLTVPRLRKLVGALNSERDAMPQRNRVYYISEKLDVSPD IVSKYLSKRLFILEMPFEMFEKNLQHMIDYNVSPINVLKDLWAFRYTPKS VQLRLERAKRAKKDKIMPWMVRCPEPILQRSLKLSLDELKVLGEFSSVVE YLAHRLGFSTSEAKAIMDKHPQVHTVRVTKIKEVLDYLLDEAQFTRFEVA QNPRILCHSLKTTKERMEELKSHGCRPSSLVILCRSRREYDKFLQNWISH ERNPQSVSEG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mTTF-PA | 410 | CG18124-PA | 1..410 | 1..410 | 2107 | 100 | Plus |
Translation from 112 to 1344
> AT17625.pep MIRSLLRSFETALKLHAGLNMHPMHCSRRLLFSQYENRASPSRLTSSGTL GSNEAENDYVPYRQDRETGTKTRVLLEALRERFRFTDAELQKIISDELVH RCYRGRSLTLVMDTLQLEGVSRRSFVEYPWLLSLDNKRLELKMQLLKSMD FKDINHFVPFLRLTVPRLRKLVGALNSERDAMPQRNRVYYISEKLDVSPD IVSKYLSKRLFILEMPFEMFEKNLQHMIDYNVSPINVLKDLWAFRYTPKS VQLRLERAKRAKKDKIMPWMVRCPEPILQRSLKLSLDELKVLGEFSSVVE YLAHRLGFSTSEAKAIMDKHPQVHTVRVTKIKEVLDYLLDEAQFTRFEVA QNPRILCHSLKTTKERMEELKSHGCRPSSLVILCRSRREYDKFLQNWISH ERNPQSVSEG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14494-PA | 418 | GF14494-PA | 1..417 | 1..409 | 1692 | 76.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10153-PA | 412 | GG10153-PA | 1..412 | 1..410 | 1993 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10403-PA | 431 | GH10403-PA | 1..417 | 1..402 | 1551 | 71.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mTTF-PA | 410 | CG18124-PA | 1..410 | 1..410 | 2107 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17383-PA | 426 | GI17383-PA | 1..424 | 1..408 | 1514 | 67.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21052-PA | 424 | GL21052-PA | 1..423 | 1..409 | 1611 | 71.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14804-PA | 424 | GA14804-PA | 1..423 | 1..409 | 1611 | 71.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14869-PA | 410 | GM14869-PA | 1..410 | 1..410 | 2052 | 94.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22012-PA | 403 | GD22012-PA | 1..403 | 1..410 | 1985 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18060-PA | 431 | GJ18060-PA | 1..425 | 1..409 | 1543 | 69.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18115-PA | 414 | GK18115-PA | 1..404 | 1..402 | 1529 | 72.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25060-PA | 412 | GE25060-PA | 1..412 | 1..410 | 2010 | 92.2 | Plus |