Clone AT17667 Report

Search the DGRC for AT17667

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:176
Well:67
Vector:pOTB7
Associated Gene/TranscriptCG15177-RA
Protein status:AT17667.pep: gold
Preliminary Size:678
Sequenced Size:1033

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15177 2002-01-01 Sim4 clustering to Release 2
CG15177 2003-01-01 Sim4 clustering to Release 3
CG15177 2003-07-26 Blastp of sequenced clone
CG15177 2008-04-29 Release 5.5 accounting
CG15177 2008-08-15 Release 5.9 accounting
CG15177 2008-12-18 5.12 accounting

Clone Sequence Records

AT17667.complete Sequence

1033 bp (1033 high quality bases) assembled on 2003-07-26

GenBank Submission: AY070796

> AT17667.complete
AGGAAACATATGCCAGCTGCACTAGACATATCCATTAAATCATTGTAACT
CCTTAATCGATAATCAAACAATATCATATATCCAGTAGTAAATCAAAGTA
AAGAGTAAATCACCGTGAGCTTCCCTGAACCATGGAAAACCTAGACTCCA
CTGTCGATAGCACCGAGAACAGCAAGTTCTCGGCCCTGTACGGTGGATTG
ATTAAGGAGATCGCTGCAACCTCGAAGATGTCCACCTTGGACATCACCTG
TTTGCTTTGCGTTTACTACAAGTTCGTCAGGTTCAACGGACCTGGCGCCA
AACAGATGAAGAAGAATCAGTTCTACCAGATCTACTTGGTGCTCTTCAAC
GTGGCCAATGTTCAGGTGATTGAACGCTCCCTTCTGGCCATCACCAAGGA
TACCAAGTACGTGAGTCCCCGTGCCTGGGTTGATCTCTTTGAGCTGTACA
CCACAGAGGATCTGGAGCGCCGTATGAAGTTTGCCTTTGAAGTTTATGAC
ACCAAGAACACCGGAGTTATCGATCGCGAGCAGGTGGGCGTGGCATGCGA
GAAATTCTTCCACGAAGGCGACGACGAAGATGAACTAATTGAGCTCAGAG
CGGACATGACTGAATTTATTATGAAGAAGTTTGATGTAGACAAGGATGGA
GTCATTTCGTTTGAGGACTACTCCTCGGTTGTTTCACAACAACCCGTTTT
GGTTGAGTTCTTGGGCTGGCTATTTCCATCGAACGAAGAAAGGGATCTTA
TGGCCCATGTTATCAACATGGACTCCATGCTCAATTATTGTAATCCGGAC
GCAAAATAGGCTTGTCGTTTGATTAAGCTTGATTATCCCACTGTGATAAT
AATCGAACGACAAACGACAATGAATGAGGACCAAAAGGATGCCGCCAAAG
TAGTTGATCAAAATTTTTGTATGATTTCAAATTAATCATTTTTATAAGCA
TGATATATCAAATTTCCACCAACACTTTGAAAATAAAGCAAAATGTTTCG
CGTGAGCTGTCTTAAAAAAAAAAAAAAAAAAAA

AT17667.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:39:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG15177-RA 1022 CG15177-RA 1..1017 1..1017 5085 100 Plus
sowi-RA 889 sowi-RA 315..467 299..451 330 81 Plus
sowi-RA 889 sowi-RA 580..771 567..758 330 78.1 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:18:42
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 2454622..2455114 493..1 2465 100 Minus
chr3R 27901430 chr3R 2453997..2454408 1013..602 2060 100 Minus
chr3R 27901430 chr3R 2454457..2454568 603..492 560 100 Minus
chr3R 27901430 chr3R 2453227..2453546 451..132 445 75.9 Minus
chr3R 27901430 chr3R 2452782..2452938 758..602 260 77.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:51:54 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:18:40
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6628829..6629321 493..1 2465 100 Minus
3R 32079331 3R 6628200..6628615 1017..602 2080 100 Minus
3R 32079331 3R 6628664..6628775 603..492 560 100 Minus
3R 32079331 3R 6627434..6627753 451..132 445 75.9 Minus
3R 32079331 3R 6626989..6627145 758..602 260 77.7 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:00:28
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 6369660..6370152 493..1 2465 100 Minus
3R 31820162 3R 6369031..6369446 1017..602 2080 100 Minus
3R 31820162 3R 6369495..6369606 603..492 560 100 Minus
3R 31820162 3R 6368265..6368417 451..299 330 81 Minus
3R 31820162 3R 6367820..6367976 758..602 260 77.7 Minus
Blast to na_te.dros performed 2019-03-15 15:18:41
Subject Length Description Subject Range Query Range Score Percent Strand
hopper2 1593 hopper2 HOPPER2 1593bp 1368..1433 924..995 121 69.9 Plus

AT17667.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:19:29 Download gff for AT17667.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 2453997..2454407 603..1013 100 <- Minus
chr3R 2454458..2454568 492..602 100 <- Minus
chr3R 2454624..2455114 1..491 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:11:03 Download gff for AT17667.complete
Subject Subject Range Query Range Percent Splice Strand
CG15177-RA 1..678 132..809 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:31:02 Download gff for AT17667.complete
Subject Subject Range Query Range Percent Splice Strand
CG15177-RA 1..678 132..809 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:23:25 Download gff for AT17667.complete
Subject Subject Range Query Range Percent Splice Strand
CG15177-RA 1..678 132..809 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:04:38 Download gff for AT17667.complete
Subject Subject Range Query Range Percent Splice Strand
CG15177-RA 1..678 132..809 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:01:40 Download gff for AT17667.complete
Subject Subject Range Query Range Percent Splice Strand
CG15177-RA 1..678 132..809 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:32:06 Download gff for AT17667.complete
Subject Subject Range Query Range Percent Splice Strand
CG15177-RA 1..1013 1..1013 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:31:02 Download gff for AT17667.complete
Subject Subject Range Query Range Percent Splice Strand
CG15177-RA 1..1013 1..1013 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:23:25 Download gff for AT17667.complete
Subject Subject Range Query Range Percent Splice Strand
CG15177-RA 1..1013 1..1013 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:04:39 Download gff for AT17667.complete
Subject Subject Range Query Range Percent Splice Strand
CG15177-RA 1..1013 1..1013 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:01:40 Download gff for AT17667.complete
Subject Subject Range Query Range Percent Splice Strand
CG15177-RA 1..1013 1..1013 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:19:29 Download gff for AT17667.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6628665..6628775 492..602 100 <- Minus
3R 6628204..6628614 603..1013 100 <- Minus
3R 6628831..6629321 1..491 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:19:29 Download gff for AT17667.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6628665..6628775 492..602 100 <- Minus
3R 6628204..6628614 603..1013 100 <- Minus
3R 6628831..6629321 1..491 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:19:29 Download gff for AT17667.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6628665..6628775 492..602 100 <- Minus
3R 6628204..6628614 603..1013 100 <- Minus
3R 6628831..6629321 1..491 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:23:25 Download gff for AT17667.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2453926..2454336 603..1013 100 <- Minus
arm_3R 2454387..2454497 492..602 100 <- Minus
arm_3R 2454553..2455043 1..491 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:42:44 Download gff for AT17667.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6369035..6369445 603..1013 100 <- Minus
3R 6369496..6369606 492..602 100 <- Minus
3R 6369662..6370152 1..491 100   Minus

AT17667.pep Sequence

Translation from 131 to 808

> AT17667.pep
MENLDSTVDSTENSKFSALYGGLIKEIAATSKMSTLDITCLLCVYYKFVR
FNGPGAKQMKKNQFYQIYLVLFNVANVQVIERSLLAITKDTKYVSPRAWV
DLFELYTTEDLERRMKFAFEVYDTKNTGVIDREQVGVACEKFFHEGDDED
ELIELRADMTEFIMKKFDVDKDGVISFEDYSSVVSQQPVLVEFLGWLFPS
NEERDLMAHVINMDSMLNYCNPDAK*

AT17667.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 15:04:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16646-PA 222 GF16646-PA 1..217 1..218 902 73.9 Plus
Dana\GF16647-PA 221 GF16647-PA 1..217 1..218 760 61.5 Plus
Dana\GF18370-PA 218 GF18370-PA 1..214 1..217 503 45.2 Plus
Dana\GF16917-PA 218 GF16917-PA 3..205 4..209 427 40.8 Plus
Dana\GF11793-PA 253 GF11793-PA 3..225 4..215 356 36.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 15:04:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10369-PA 225 GG10369-PA 1..225 1..225 1175 96.4 Plus
Dere\GG10380-PA 217 GG10380-PA 1..217 1..218 899 76.1 Plus
Dere\GG13568-PA 220 GG13568-PA 1..214 1..217 514 47 Plus
Dere\GG19247-PA 219 GG19247-PA 3..205 4..209 424 40.3 Plus
Dere\GG22989-PA 244 GG22989-PA 1..224 1..215 340 34.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 15:04:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15665-PA 218 GH15665-PA 1..214 1..217 576 49.3 Plus
Dgri\GH20009-PA 263 GH20009-PA 1..211 1..202 332 35.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:20:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG15177-PA 225 CG15177-PA 1..225 1..225 1166 100 Plus
CG15177-PB 217 CG15177-PB 1..217 1..225 1106 96.4 Plus
sowi-PA 217 CG15178-PA 1..217 1..218 873 75.2 Plus
sunz-PA 220 CG15179-PA 1..213 1..216 507 47.2 Plus
d-cup-PA 219 CG14387-PA 3..205 4..209 421 40.8 Plus
CG3565-PA 244 CG3565-PA 1..224 1..215 358 36.4 Plus
CG2256-PC 324 CG2256-PC 225..312 114..201 148 31.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 15:04:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22488-PA 220 GI22488-PA 1..216 1..217 579 47 Plus
Dmoj\GI19190-PA 221 GI19190-PA 1..220 1..213 403 38.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 15:04:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22057-PA 224 GL22057-PA 1..217 1..218 786 65.1 Plus
Dper\GL21763-PA 220 GL21763-PA 1..216 1..217 561 47.9 Plus
Dper\GL10228-PA 234 GL10228-PA 1..224 1..215 420 40.9 Plus
Dper\GL26899-PA 351 GL26899-PA 252..339 114..201 147 33 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 15:04:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13550-PA 224 GA13550-PA 1..217 1..218 786 65.1 Plus
Dpse\GA13552-PA 220 GA13552-PA 1..216 1..217 556 47.9 Plus
Dpse\GA17523-PA 234 GA17523-PA 1..224 1..215 421 41.3 Plus
Dpse\GA15326-PA 224 GA15326-PA 125..212 114..201 143 31.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 15:04:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10540-PA 225 GM10540-PA 1..225 1..225 1196 99.6 Plus
Dsec\GM10541-PA 217 GM10541-PA 1..217 1..218 888 74.8 Plus
Dsec\GM10904-PA 220 GM10904-PA 1..214 1..217 512 47 Plus
Dsec\GM24064-PA 219 GM24064-PA 3..205 4..209 431 39.8 Plus
Dsec\GM11883-PA 244 GM11883-PA 1..224 1..215 312 34.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 15:04:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19538-PA 225 GD19538-PA 1..225 1..225 1196 99.6 Plus
Dsim\GD19539-PA 233 GD19539-PA 1..194 1..195 805 76.9 Plus
Dsim\GD19884-PA 197 GD19884-PA 1..197 1..200 470 47.5 Plus
Dsim\GD18861-PA 219 GD18861-PA 3..205 4..209 431 39.8 Plus
Dsim\GD11881-PA 244 GD11881-PA 1..224 1..215 311 34.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 15:04:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20255-PA 224 GJ20255-PA 1..224 1..215 428 40 Plus
Dvir\GJ10087-PA 158 GJ10087-PA 1..157 1..158 422 47.5 Plus
Dvir\GJ23423-PA 63 GJ23423-PA 1..59 159..217 168 52.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 15:04:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11523-PA 219 GK11523-PA 1..215 1..216 728 62.5 Plus
Dwil\GK11579-PA 214 GK11579-PA 1..209 1..212 533 46.7 Plus
Dwil\GK22790-PA 222 GK22790-PA 2..219 3..218 388 33.5 Plus
Dwil\GK25274-PA 320 GK25274-PA 205..308 98..201 148 27.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 15:04:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24093-PA 225 GE24093-PA 1..225 1..225 1183 97.3 Plus
Dyak\GE24094-PA 207 GE24094-PA 2..207 12..218 852 75.8 Plus
Dyak\GE10232-PA 220 GE10232-PA 1..214 1..217 520 47.5 Plus
Dyak\GE26222-PA 219 GE26222-PA 3..205 4..209 430 40.8 Plus
Dyak\GE14426-PA 244 GE14426-PA 1..224 1..215 315 35.1 Plus

AT17667.hyp Sequence

Translation from 131 to 808

> AT17667.hyp
MENLDSTVDSTENSKFSALYGGLIKEIAATSKMSTLDITCLLCVYYKFVR
FNGPGAKQMKKNQFYQIYLVLFNVANVQVIERSLLAITKDTKYVSPRAWV
DLFELYTTEDLERRMKFAFEVYDTKNTGVIDREQVGVACEKFFHEGDDED
ELIELRADMTEFIMKKFDVDKDGVISFEDYSSVVSQQPVLVEFLGWLFPS
NEERDLMAHVINMDSMLNYCNPDAK*

AT17667.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:02:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG15177-PA 225 CG15177-PA 1..225 1..225 1166 100 Plus
CG15177-PB 217 CG15177-PB 1..217 1..225 1106 96.4 Plus
sowi-PA 217 CG15178-PA 1..217 1..218 873 75.2 Plus
sunz-PA 220 CG15179-PA 1..213 1..216 507 47.2 Plus
d-cup-PA 219 CG14387-PA 3..205 4..209 421 40.8 Plus