AT17684.complete Sequence
1197 bp (1197 high quality bases) assembled on 2002-02-26
GenBank Submission: AY089352
> AT17684.complete
AAGATCTTTTTTTTTGTAATCTTCCTCTGACTTGCTTAGTGGTAGCCGTC
TACAAGAATGAAGAGCCGATAGTCCCGCTTCGGCAATATCTGTATTATCA
ATGGAGTCTTCAAGCTGGCTCACGTGGTTGACCTTGGAAAAATGCGACAA
CTTATGGACGAAATCGCTTAAGATGCCGCTTCCTTGTAGGAAAGGAGGAT
TGAGATCTTTTTTGAGTACTCATCTCAAAGGCGCAACGGAGTGTGTTAAC
CGGATAGCCAGTGCCCCCGTGAGGAAACCTTGCTCGATAAACTGGCTGGG
ATCTGCATGGAAATGGATAGCTGGGAATCCCGACGCAGCTGACTGGAACA
CAATTCTGGCAACACAGAAGGTGCCCTTAAAGAATAGTGACCAACAACTG
AGGATTAACTCCAGACTCTTCGACGCCACCCACGAGTCAATTACGAATAA
ACGAGGCCATCGCAATAGTAATTGTCATTGATGGGGACATCTATGTGACG
ACTGCTATCCTAAACTATGCTATTATCCTTACCAACCAAGTCTCGGAAGT
CACAAGAGCTTGGCAGCTAGATAAGACGCTTGCGAGGCCTTAACAGTTGG
TGGCCGAAATTTCACGAGCTACTCAAACTGCCACTTGATGTCATTGCCGG
CCGTCCTAACACAAGTATCAGCCAACGCCAGTCTCTGGAGTAGATGCGTG
ACGCAGCATTGACTCTGCTCATCGTTTCTCTCTTGTATTTCCTGTGAAGA
AAATTGACCTCTACCTATGGACTACAGAAATTAGGCAATATTACCTTGAT
CCCGGATCCGCCTGTTACCTCCGGACAGACCAAGGCTACTTAATCTGGGC
ACTTGCTTCCCCCTCCCAACCCCGTTCGAAGCCACTATTGCAGCTGCGGG
GTAGTTCCTACCCCACCTCCATCGCAACGTCAGCACCGGACGACAGGTCA
ACGACCCTAGAGCTCTGTAGCGTACCGCTGACGACGCTGCGCGTGTGACT
GCAGCGGAATGCGATGACACCGTGGGATTTGGCTAAGCGGCCGGCAAAAC
ACTGGCCTGGCAGTCGAATTTCGGTAATGGAGCGTAGTTAACTTTTGAAT
CCAACTTTGTATTTAATCAAATTAATTAAGTCTGACTGAGTATCTAAATA
AATCGAAGATGTTACTTTGATAAAAAAAAAAAAAAAAAAAAAAAAAA
AT17684.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:23:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
nc_4443.a | 1208 | nc_4443.a | 1..849 | 1..849 | 4185 | 99.5 | Plus |
nc_4443.a | 1208 | nc_4443.a | 886..1208 | 849..1171 | 1585 | 99.3 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:09:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 983517..984219 | 703..1 | 3485 | 99.7 | Minus |
chr2R | 21145070 | chr2R | 982943..983265 | 1171..849 | 1585 | 99.4 | Minus |
chr2R | 21145070 | chr2R | 983302..983448 | 849..703 | 720 | 99.3 | Minus |
chr2RHet | 3288813 | chr2RHet | 1570746..1570896 | 222..372 | 440 | 86.1 | Plus |
chr3L | 24539361 | chr3L | 23870898..23871042 | 847..703 | 425 | 86.2 | Minus |
chr2RHet | 3288813 | chr2RHet | 1570931..1571064 | 445..578 | 415 | 87.3 | Plus |
chr2RHet | 3288813 | chr2RHet | 2362265..2362571 | 239..569 | 400 | 77.5 | Plus |
chr2RHet | 3288813 | chr2RHet | 1639093..1639278 | 399..205 | 380 | 82.1 | Minus |
chr3L | 24539361 | chr3L | 23416230..23416382 | 896..1039 | 340 | 83 | Plus |
chr3L | 24539361 | chr3L | 24111618..24111787 | 222..399 | 300 | 79.2 | Plus |
chr2RHet | 3288813 | chr2RHet | 2371075..2371163 | 703..791 | 280 | 87.6 | Plus |
chr3RHet | 2517486 | chr3RHet | 2072887..2072975 | 984..896 | 280 | 87.6 | Minus |
chr3RHet | 2517486 | chr3RHet | 1786348..1786436 | 896..984 | 280 | 87.6 | Plus |
chr2RHet | 3288813 | chr2RHet | 1571296..1571433 | 910..1039 | 265 | 82.7 | Plus |
chr2RHet | 3288813 | chr2RHet | 1638583..1638716 | 837..709 | 260 | 81.3 | Minus |
chr3L | 24539361 | chr3L | 23871153..23871237 | 667..583 | 245 | 85.9 | Minus |
chr2RHet | 3288813 | chr2RHet | 1570628..1570720 | 81..173 | 240 | 83.9 | Plus |
chr2RHet | 3288813 | chr2RHet | 2370883..2370961 | 583..661 | 230 | 86.1 | Plus |
chr3RHet | 2517486 | chr3RHet | 1900386..1900450 | 783..847 | 220 | 89.2 | Plus |
chr3RHet | 2517486 | chr3RHet | 2073218..2073281 | 677..614 | 215 | 89.1 | Minus |
chr3RHet | 2517486 | chr3RHet | 1786230..1786294 | 783..847 | 205 | 87.7 | Plus |
chr3RHet | 2517486 | chr3RHet | 1786032..1786095 | 614..677 | 200 | 87.5 | Plus |
chr3LHet | 2555433 | chr3LHet | 2451058..2451127 | 973..904 | 200 | 85.7 | Minus |
chr3RHet | 2517486 | chr3RHet | 2073029..2073093 | 847..783 | 190 | 86.2 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:51:56 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:08:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 5096021..5096723 | 703..1 | 3485 | 99.7 | Minus |
2R | 25286936 | 2R | 5095443..5095769 | 1175..849 | 1605 | 99.4 | Minus |
2R | 25286936 | 2R | 5095806..5095952 | 849..703 | 705 | 98.6 | Minus |
2R | 25286936 | 2R | 2795671..2795821 | 222..372 | 440 | 86.1 | Plus |
3L | 28110227 | 3L | 23882004..23882148 | 847..703 | 425 | 86.2 | Minus |
2R | 25286936 | 2R | 2795856..2795989 | 445..578 | 415 | 87.3 | Plus |
2R | 25286936 | 2R | 3564433..3564739 | 239..569 | 400 | 77.5 | Plus |
2R | 25286936 | 2R | 2864053..2864238 | 399..205 | 380 | 82.1 | Minus |
3L | 28110227 | 3L | 23427314..23427466 | 896..1039 | 340 | 83 | Plus |
3L | 28110227 | 3L | 24122711..24122880 | 222..399 | 300 | 79.2 | Plus |
2R | 25286936 | 2R | 3573243..3573331 | 703..791 | 280 | 87.6 | Plus |
3R | 32079331 | 3R | 3408585..3408673 | 896..984 | 280 | 87.6 | Plus |
3R | 32079331 | 3R | 3427728..3427816 | 896..984 | 280 | 87.6 | Plus |
3R | 32079331 | 3R | 3772439..3772527 | 984..896 | 280 | 87.6 | Minus |
2R | 25286936 | 2R | 2796221..2796358 | 910..1039 | 265 | 82.7 | Plus |
2R | 25286936 | 2R | 2863543..2863676 | 837..709 | 260 | 81.3 | Minus |
3L | 28110227 | 3L | 23882259..23882343 | 667..583 | 245 | 85.9 | Minus |
2R | 25286936 | 2R | 2795553..2795645 | 81..173 | 240 | 83.9 | Plus |
2R | 25286936 | 2R | 3573051..3573129 | 583..661 | 230 | 86.1 | Plus |
3R | 32079331 | 3R | 3621803..3621867 | 847..783 | 220 | 89.2 | Minus |
3R | 32079331 | 3R | 3408279..3408342 | 614..677 | 215 | 89.1 | Plus |
3R | 32079331 | 3R | 3427422..3427485 | 614..677 | 215 | 89.1 | Plus |
3R | 32079331 | 3R | 3772581..3772645 | 847..783 | 205 | 87.7 | Minus |
3L | 28110227 | 3L | 27328131..27328200 | 973..904 | 200 | 85.7 | Minus |
3R | 32079331 | 3R | 3772780..3772843 | 677..614 | 200 | 87.5 | Minus |
3R | 32079331 | 3R | 2509868..2509906 | 741..703 | 195 | 100 | Minus |
3R | 32079331 | 3R | 2513626..2513664 | 741..703 | 195 | 100 | Minus |
3R | 32079331 | 3R | 2506047..2506111 | 847..783 | 190 | 86.2 | Minus |
3R | 32079331 | 3R | 2506141..2506178 | 740..703 | 190 | 100 | Minus |
3R | 32079331 | 3R | 2509775..2509839 | 847..783 | 190 | 86.2 | Minus |
3R | 32079331 | 3R | 2513533..2513597 | 847..783 | 190 | 86.2 | Minus |
3R | 32079331 | 3R | 3408467..3408531 | 783..847 | 190 | 86.2 | Plus |
3R | 32079331 | 3R | 3427610..3427674 | 783..847 | 190 | 86.2 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:53:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 5097220..5097922 | 703..1 | 3485 | 99.7 | Minus |
2R | 25260384 | 2R | 5096642..5096968 | 1175..849 | 1605 | 99.3 | Minus |
2R | 25260384 | 2R | 5097005..5097151 | 849..703 | 705 | 98.6 | Minus |
2R | 25260384 | 2R | 2795671..2795821 | 222..372 | 440 | 86 | Plus |
3L | 28103327 | 3L | 23875104..23875248 | 847..703 | 425 | 86.2 | Minus |
2R | 25260384 | 2R | 2795856..2795989 | 445..578 | 415 | 87.3 | Plus |
2R | 25260384 | 2R | 3565632..3565742 | 239..349 | 375 | 89.1 | Plus |
2R | 25260384 | 2R | 2864130..2864238 | 314..205 | 345 | 89 | Minus |
3L | 28103327 | 3L | 23420414..23420502 | 896..984 | 310 | 89.8 | Plus |
2R | 25260384 | 2R | 3574442..3574530 | 703..791 | 280 | 87.6 | Plus |
3R | 31820162 | 3R | 3089166..3089254 | 896..984 | 280 | 87.6 | Plus |
3R | 31820162 | 3R | 3070023..3070111 | 896..984 | 280 | 87.6 | Plus |
3R | 31820162 | 3R | 3433877..3433965 | 984..896 | 280 | 87.6 | Minus |
2R | 25260384 | 2R | 3565856..3565938 | 487..569 | 265 | 87.9 | Plus |
3L | 28103327 | 3L | 24115811..24115905 | 222..316 | 265 | 85.2 | Plus |
2R | 25260384 | 2R | 2863594..2863676 | 791..709 | 250 | 86.7 | Minus |
3L | 28103327 | 3L | 23875359..23875443 | 667..583 | 245 | 85.8 | Minus |
2R | 25260384 | 2R | 2795553..2795645 | 81..173 | 240 | 83.8 | Plus |
2R | 25260384 | 2R | 2607779..2607875 | 677..583 | 235 | 84.5 | Minus |
2R | 25260384 | 2R | 2601325..2601421 | 677..583 | 235 | 84.5 | Minus |
2R | 25260384 | 2R | 3574250..3574328 | 583..661 | 230 | 86 | Plus |
2R | 25260384 | 2R | 2796303..2796358 | 984..1039 | 220 | 92.8 | Plus |
3R | 31820162 | 3R | 3283241..3283305 | 847..783 | 220 | 89.2 | Minus |
3R | 31820162 | 3R | 3088860..3088923 | 614..677 | 215 | 89 | Plus |
3R | 31820162 | 3R | 3069717..3069780 | 614..677 | 215 | 89 | Plus |
3R | 31820162 | 3R | 3434019..3434083 | 847..783 | 205 | 87.6 | Minus |
3R | 31820162 | 3R | 3434218..3434281 | 677..614 | 200 | 87.5 | Minus |
3L | 28103327 | 3L | 27321231..27321300 | 973..904 | 200 | 85.7 | Minus |
3R | 31820162 | 3R | 2311204..2311242 | 741..703 | 195 | 100 | Minus |
3R | 31820162 | 3R | 2307446..2307484 | 741..703 | 195 | 100 | Minus |
3R | 31820162 | 3R | 3089048..3089112 | 783..847 | 190 | 86.1 | Plus |
3R | 31820162 | 3R | 3069905..3069969 | 783..847 | 190 | 86.1 | Plus |
3R | 31820162 | 3R | 2311111..2311175 | 847..783 | 190 | 86.1 | Minus |
3R | 31820162 | 3R | 2307353..2307417 | 847..783 | 190 | 86.1 | Minus |
3R | 31820162 | 3R | 2303625..2303689 | 847..783 | 190 | 86.1 | Minus |
3R | 31820162 | 3R | 2303719..2303756 | 740..703 | 190 | 100 | Minus |
3L | 28103327 | 3L | 24115913..24115980 | 332..399 | 190 | 85.2 | Plus |
2R | 25260384 | 2R | 2864053..2864122 | 399..330 | 185 | 84.2 | Minus |
3L | 28103327 | 3L | 24116113..24116205 | 713..805 | 180 | 79.5 | Plus |
3L | 28103327 | 3L | 23874866..23874946 | 1116..1036 | 180 | 81.4 | Minus |
2R | 25260384 | 2R | 2863471..2863526 | 1039..984 | 175 | 87.5 | Minus |
3R | 31820162 | 3R | 3283440..3283480 | 677..637 | 175 | 95.1 | Minus |
3R | 31820162 | 3R | 3434086..3434136 | 753..703 | 165 | 88.2 | Minus |
3R | 31820162 | 3R | 3088996..3089045 | 704..753 | 160 | 88 | Plus |
3R | 31820162 | 3R | 3069853..3069902 | 704..753 | 160 | 88 | Plus |
3L | 28103327 | 3L | 23420511..23420566 | 984..1039 | 160 | 85.7 | Plus |
3R | 31820162 | 3R | 3283143..3283182 | 935..896 | 155 | 92.5 | Minus |
3L | 28103327 | 3L | 24116208..24116241 | 814..847 | 155 | 97 | Plus |
2R | 25260384 | 2R | 2863794..2863832 | 621..583 | 150 | 92.3 | Minus |
3R | 31820162 | 3R | 3283308..3283358 | 753..703 | 150 | 86.2 | Minus |
3L | 28103327 | 3L | 23875926..23875967 | 577..536 | 150 | 90.4 | Minus |
2R | 25260384 | 2R | 2607127..2607182 | 1039..984 | 145 | 83.9 | Minus |
2R | 25260384 | 2R | 2600673..2600728 | 1039..984 | 145 | 83.9 | Minus |
Blast to na_te.dros performed on 2019-03-16 06:08:58 has no hits.
AT17684.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed on 2019-03-16 06:09:51 has no hits.
Sim4 to dmel-all-CDS-r5.12.fasta performed on 2008-12-08 15:11:06 has no hits.
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 19:06:34 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed on 2008-11-10 22:00:13 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 17:33:12 Download gff for
AT17684.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG41332-RA | 102..240 | 439..578 | 85 | | Plus |
CG41332-RA | 2..44 | 116..158 | 88 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:09:51 Download gff for
AT17684.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5095447..5095772 | 845..1171 | 98 | -> | Minus |
2R | 5095811..5095952 | 703..844 | 98 | <- | Minus |
2R | 5096022..5096723 | 1..702 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:09:51 Download gff for
AT17684.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5095447..5095772 | 845..1171 | 98 | -> | Minus |
2R | 5095811..5095952 | 703..844 | 98 | <- | Minus |
2R | 5096022..5096723 | 1..702 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:09:51 Download gff for
AT17684.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5095447..5095772 | 845..1171 | 98 | -> | Minus |
2R | 5095811..5095952 | 703..844 | 98 | <- | Minus |
2R | 5096022..5096723 | 1..702 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:25:10 Download gff for
AT17684.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 982952..983277 | 845..1171 | 98 | -> | Minus |
arm_2R | 983316..983457 | 703..844 | 98 | <- | Minus |
arm_2R | 983527..984228 | 1..702 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:25:10 Download gff for
AT17684.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 982952..983277 | 845..1171 | 98 | -> | Minus |
arm_2R | 983316..983457 | 703..844 | 98 | <- | Minus |
arm_2R | 983527..984228 | 1..702 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:25:10 Download gff for
AT17684.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 982952..983277 | 845..1171 | 98 | -> | Minus |
arm_2R | 983316..983457 | 703..844 | 98 | <- | Minus |
arm_2R | 983527..984228 | 1..702 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:40:26 Download gff for
AT17684.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5096646..5096971 | 845..1171 | 98 | -> | Minus |
2R | 5097010..5097151 | 703..844 | 98 | <- | Minus |
2R | 5097221..5097922 | 1..702 | 99 | | Minus |
AT17684.pep Sequence
Translation from 100 to 480
> AT17684.pep
MESSSWLTWLTLEKCDNLWTKSLKMPLPCRKGGLRSFLSTHLKGATECVN
RIASAPVRKPCSINWLGSAWKWIAGNPDAADWNTILATQKVPLKNSDQQL
RINSRLFDATHESITNKRGHRNSNCH*
AT17684.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 23:07:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG17521-PA | 472 | GG17521-PA | 62..139 | 38..114 | 237 | 56.4 | Plus |
Dere\GG23150-PA | 471 | GG23150-PA | 59..138 | 34..114 | 208 | 45.7 | Plus |
Dere\GG13131-PA | 189 | GG13131-PA | 67..138 | 42..114 | 199 | 52.1 | Plus |
Dere\GG10917-PA | 224 | GG10917-PA | 35..138 | 10..114 | 167 | 32.4 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 23:07:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM19604-PA | 611 | GM19604-PA | 86..138 | 62..114 | 199 | 60.4 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 23:07:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE15084-PA | 200 | GE15084-PA | 21..100 | 35..114 | 245 | 60 | Plus |
Dyak\GE15284-PA | 482 | GE15284-PA | 5..84 | 34..114 | 212 | 46.9 | Plus |
Dyak\GE12971-PA | 349 | GE12971-PA | 62..138 | 37..114 | 196 | 47.4 | Plus |
Dyak\GE11151-PA | 113 | GE11151-PA | 1..102 | 10..112 | 159 | 32 | Plus |
Dyak\GE12958-PA | 107 | GE12958-PA | 44..105 | 36..98 | 136 | 39.7 | Plus |
AT17684.hyp Sequence
Translation from 100 to 480
> AT17684.hyp
MESSSWLTWLTLEKCDNLWTKSLKMPLPCRKGGLRSFLSTHLKGATECVN
RIASAPVRKPCSINWLGSAWKWIAGNPDAADWNTILATQKVPLKNSDQQL
RINSRLFDATHESITNKRGHRNSNCH*
Sequence AT17684.hyp has no blast hits.