BDGP Sequence Production Resources |
Search the DGRC for AT17730
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 177 |
Well: | 30 |
Vector: | pOTB7 |
Associated Gene/Transcript | Coq2-RA |
Protein status: | AT17730.pep: gold |
Preliminary Size: | 1179 |
Sequenced Size: | 1628 |
Gene | Date | Evidence |
---|---|---|
CG9613 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9613 | 2002-01-18 | Blastp of sequenced clone |
CG9613 | 2003-01-01 | Sim4 clustering to Release 3 |
Coq2 | 2008-04-29 | Release 5.5 accounting |
Coq2 | 2008-08-15 | Release 5.9 accounting |
Coq2 | 2008-12-18 | 5.12 accounting |
1628 bp (1628 high quality bases) assembled on 2002-01-18
GenBank Submission: AY089354
> AT17730.complete AAACATCTTGCCATTTTTTGACTGTGCTAGTGCAAGGCAAATCGCAATGT ATGCGCTTCGACACCTGCGACTCCAGAGCGCTAGGCACTTCCGCAGCTCT TATGCAGCGGCGGCAACAACAAAACACATGCTGCCCCGGCAACCAGCGCG TGTTCTGATTGGAGATTGGAGCACTTGGGATAAGTCCCGGCTGCAGGATG TATGCTCCAGGAGTTCGAGTACCGCCACTGAGCCCGTGAAGCAGCAAACG CCGCTGCAGGAACTCGTGTCGGCCGCCAAACCCTATGCCCAACTAATGCG AATCGACCGGCCTATTGGCACCTACCTCCTTTTCTGGCCTTGCGCCTGGA GCATAGCGCTCAGCGCGGATGCGGGCTGCTGGCCGGACCTCACCATGCTG GGTCTGTTCGGCACCGGGGCACTGATAATGCGCGGCGCCGGGTGCACTAT CAACGATCTCTGGGACAAGGACATCGATGCCAAAGTGGAGCGCACGAGGT TGCGGCCCTTGGCCTCGGGTCAGATCAGTCAGTTCGATGCCATAGTATTC CTCTCGGCGCAGCTCAGTCTGGGTCTTTTGGTGCTGGTCCAGCTCAACTG GCAATCCATATTGTTGGGCGCCAGTTCGCTGGGCCTCGTGATCACGTATC CGCTGATGAAAAGAGTCACCTACTGGCCCCAGCTGGTTCTGGGCATGGCC TTCAATTGGGGCGCCCTACTGGGCTGGTGTGCCACCCAGGGCAGTGTCAA CCTTGCCGCCTGCTTGCCACTCTACCTCTCCGGCGTCTGTTGGACCATTG TCTACGACACGATATACGCCCACCAGGACAAGCTGGATGACCTGCAGATC GGTGTGAAGTCCACGGCACTTCGATTTGGGGAGAACACCAAGGTCTGGCT GTCGGGATTCACGGCAGCAATGCTGACGGGTCTTTCTGCCGCCGGCTGGG CTTGCGATCAAACGGTGCCGTACTACGCGGCTGTTGGAGTAGTGGGTGCC CATCTGGTGCAGCAGATCTATTCCCTCAACATTGACAACCCCAGCGACTG CGCCAAAAAGTTCATATCGAACCACCAAGTAGGACTCATTCTCTTCCTCG GCATTGTTCTGGGCACCCTTCTGAAATCAGACGAAAGCAAGAAACAGCGA CAATCCTCACTAACAACATCGACGGCCAGCTCGTACGTTCCAGCGCTGCC GCAAAAGCCAGAAGTTTTAAGCTGAGATGAGCCAGACGAGCGTAGATTGT AGTGTTAAATTATGTTTATAGCGCGCTTTTTGATTCGCCAAAACCAAAGT CTCTAGGTATCTGATTAGATAAAATCTTGTAAATAGGCTTATGACAATTT TTAGCTCATTTGCAATAGGTTAAGTCTTAAAGAATATTACTAAGTGCACA CCTCACTTAAACATCAATTAATTCTTAATTGTAAGTGCCCGCCTTGACGT AAGAACTTACGTAAATCACCCATCCCCTGAGCCCTCCTAACCCATTTGAA AAGCAAACTGGTTTCTGTATTAAATTCTTACGTGTTATTTATTATTATTA TACAGATTTTGGTTGTCTATTGAAATTCAAATACTCTTCAAATGTAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 4140801..4141380 | 1016..1595 | 99 | <- | Minus |
chr3R | 4141439..4142430 | 24..1015 | 100 | <- | Minus |
chr3R | 4142490..4142512 | 1..23 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Coq2-RA | 1..1179 | 47..1225 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Coq2-RA | 1..1179 | 47..1225 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Coq2-RA | 1..1179 | 47..1225 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Coq2-RA | 1..1179 | 47..1225 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Coq2-RA | 1..1179 | 47..1225 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Coq2-RA | 1..1595 | 1..1595 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Coq2-RA | 1..1595 | 1..1595 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Coq2-RA | 49..1643 | 1..1595 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Coq2-RA | 1..1595 | 1..1595 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Coq2-RA | 49..1643 | 1..1595 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8314784..8315363 | 1016..1595 | 99 | <- | Minus |
3R | 8315422..8316413 | 24..1015 | 99 | <- | Minus |
3R | 8316473..8316495 | 1..23 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8314784..8315363 | 1016..1595 | 99 | <- | Minus |
3R | 8315422..8316413 | 24..1015 | 99 | <- | Minus |
3R | 8316473..8316495 | 1..23 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8314784..8315363 | 1016..1595 | 99 | <- | Minus |
3R | 8315422..8316413 | 24..1015 | 99 | <- | Minus |
3R | 8316473..8316495 | 1..23 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 4140506..4141085 | 1016..1595 | 99 | <- | Minus |
arm_3R | 4141144..4142135 | 24..1015 | 99 | <- | Minus |
arm_3R | 4142195..4142217 | 1..23 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8055615..8056194 | 1016..1595 | 99 | <- | Minus |
3R | 8056253..8057244 | 24..1015 | 99 | <- | Minus |
3R | 8057304..8057326 | 1..23 | 100 | Minus |
Translation from 1 to 1224
> AT17730.hyp NILPFFDCASARQIAMYALRHLRLQSARHFRSSYAAAATTKHMLPRQPAR VLIGDWSTWDKSRLQDVCSRSSSTATEPVKQQTPLQELVSAAKPYAQLMR IDRPIGTYLLFWPCAWSIALSADAGCWPDLTMLGLFGTGALIMRGAGCTI NDLWDKDIDAKVERTRLRPLASGQISQFDAIVFLSAQLSLGLLVLVQLNW QSILLGASSLGLVITYPLMKRVTYWPQLVLGMAFNWGALLGWCATQGSVN LAACLPLYLSGVCWTIVYDTIYAHQDKLDDLQIGVKSTALRFGENTKVWL SGFTAAMLTGLSAAGWACDQTVPYYAAVGVVGAHLVQQIYSLNIDNPSDC AKKFISNHQVGLILFLGIVLGTLLKSDESKKQRQSSLTTSTASSYVPALP QKPEVLS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Coq2-PA | 392 | CG9613-PA | 1..392 | 16..407 | 2041 | 100 | Plus |
Translation from 46 to 1224
> AT17730.pep MYALRHLRLQSARHFRSSYAAAATTKHMLPRQPARVLIGDWSTWDKSRLQ DVCSRSSSTATEPVKQQTPLQELVSAAKPYAQLMRIDRPIGTYLLFWPCA WSIALSADAGCWPDLTMLGLFGTGALIMRGAGCTINDLWDKDIDAKVERT RLRPLASGQISQFDAIVFLSAQLSLGLLVLVQLNWQSILLGASSLGLVIT YPLMKRVTYWPQLVLGMAFNWGALLGWCATQGSVNLAACLPLYLSGVCWT IVYDTIYAHQDKLDDLQIGVKSTALRFGENTKVWLSGFTAAMLTGLSAAG WACDQTVPYYAAVGVVGAHLVQQIYSLNIDNPSDCAKKFISNHQVGLILF LGIVLGTLLKSDESKKQRQSSLTTSTASSYVPALPQKPEVLS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16669-PA | 397 | GF16669-PA | 1..397 | 1..392 | 1753 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17457-PA | 392 | GG17457-PA | 1..392 | 1..392 | 1945 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17422-PA | 382 | GH17422-PA | 14..382 | 18..392 | 1488 | 77.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Coq2-PA | 392 | CG9613-PA | 1..392 | 1..392 | 2041 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22751-PA | 383 | GI22751-PA | 1..383 | 29..392 | 1538 | 78.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24118-PA | 229 | GL24118-PA | 143..229 | 303..392 | 280 | 64.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21912-PA | 397 | GA21912-PA | 1..397 | 1..392 | 1628 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26350-PA | 365 | GM26350-PA | 1..365 | 28..392 | 1872 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15120-PA | 392 | GD15120-PA | 1..392 | 1..392 | 2028 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22752-PA | 383 | GJ22752-PA | 1..383 | 29..392 | 1526 | 78.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14102-PA | 400 | GK14102-PA | 1..400 | 1..392 | 1608 | 79.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24856-PA | 392 | GE24856-PA | 1..392 | 1..392 | 1988 | 96.7 | Plus |