AT17982.complete Sequence
619 bp (619 high quality bases) assembled on 2004-05-03
GenBank Submission: BT014670
> AT17982.complete
CAGACATTAGTTGAAAATTTCTAAATTAATTTTTTTTCATCAATATGAAC
TTCAAGGCTCGTTATTCGAAATCTGTAAGTCCACCGAAGCGAGTAGGAAT
ATCCCTCGAGGATCCTGTGTCCAGCTGCGATGAGTTTCCCAGACCCCTGG
GTCCGATGTTGAAATACATAGCCCTGTCTCCGAATTATCAGATGCCCAGG
AGAAAAGCTCCTCTAAATAGGGCCAATGTGCCAAAAACAAACCGGGCCAG
AAAATCTGGAAAAAAACACAAGATGCACTTATCCAAGGCATCGACTTACG
GCCGAAAGCGCCCTGCCAGAAAAGTCACAAAAAGGCGAGATGTGATCAAC
AAGAAACCCAGAAAATCGAAAGGCACCAAGATCATTGGTGGGGAGGAGAA
GCCCATAGAATCCAATAGTAGACCCTGGTGGAAATTGTTGTTTAGCAGAA
AGCAGAATGACGAAAAAACACAGCAAGATAACATATCCTGCAATGTTTTG
ATGACCGACAGGTCAACCCAAACGATTGTCAGTCCTCAATGTAATAATAT
TGATGACGATAAACTTGCACCATTTGACAAGCCAAATAAATACATTTAGC
TAAAAAAAAAAAAAAAAAA
AT17982.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 20:51:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42523-RA | 601 | CG42523-RA | 1..601 | 1..601 | 3005 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:14:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 4762065..4762665 | 1..601 | 3005 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:52:14 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:14:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 4762937..4763540 | 1..604 | 3020 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:11:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 4762937..4763540 | 1..604 | 3020 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-15 15:14:52 has no hits.
AT17982.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:15:45 Download gff for
AT17982.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 4762065..4762665 | 1..601 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:47:59 Download gff for
AT17982.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42523-RA | 1..555 | 45..599 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:08:56 Download gff for
AT17982.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42523-RA | 1..555 | 45..599 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 21:29:06 has no hits.
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:32:50 Download gff for
AT17982.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42523-RA | 1..555 | 45..599 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:47:59 Download gff for
AT17982.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42523-RA | 1..601 | 1..601 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:08:56 Download gff for
AT17982.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42523-RA | 43..643 | 1..601 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 21:29:09 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:32:50 Download gff for
AT17982.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42523-RA | 43..643 | 1..601 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:15:45 Download gff for
AT17982.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 4762937..4763537 | 1..601 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:15:45 Download gff for
AT17982.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 4762937..4763537 | 1..601 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:15:45 Download gff for
AT17982.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 4762937..4763537 | 1..601 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:08:56 Download gff for
AT17982.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 4762937..4763537 | 1..601 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:06:15 Download gff for
AT17982.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 4762937..4763537 | 1..601 | 100 | | Plus |
AT17982.hyp Sequence
Translation from 44 to 598
> AT17982.hyp
MNFKARYSKSVSPPKRVGISLEDPVSSCDEFPRPLGPMLKYIALSPNYQM
PRRKAPLNRANVPKTNRARKSGKKHKMHLSKASTYGRKRPARKVTKRRDV
INKKPRKSKGTKIIGGEEKPIESNSRPWWKLLFSRKQNDEKTQQDNISCN
VLMTDRSTQTIVSPQCNNIDDDKLAPFDKPNKYI*
AT17982.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:02:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42523-PB | 184 | CG42523-PB | 1..184 | 1..184 | 975 | 100 | Plus |
CG42523-PA | 184 | CG42523-PA | 1..184 | 1..184 | 975 | 100 | Plus |
AT17982.pep Sequence
Translation from 44 to 598
> AT17982.pep
MNFKARYSKSVSPPKRVGISLEDPVSSCDEFPRPLGPMLKYIALSPNYQM
PRRKAPLNRANVPKTNRARKSGKKHKMHLSKASTYGRKRPARKVTKRRDV
INKKPRKSKGTKIIGGEEKPIESNSRPWWKLLFSRKQNDEKTQQDNISCN
VLMTDRSTQTIVSPQCNNIDDDKLAPFDKPNKYI*
AT17982.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:42:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42523-PB | 184 | CG42523-PB | 1..184 | 1..184 | 975 | 100 | Plus |
CG42523-PA | 184 | CG42523-PA | 1..184 | 1..184 | 975 | 100 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 22:43:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD23298-PA | 180 | GD23298-PA | 1..176 | 1..170 | 613 | 74 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 22:43:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE18305-PA | 175 | GE18305-PA | 1..163 | 1..163 | 446 | 57.2 | Plus |