BDGP Sequence Production Resources |
Search the DGRC for AT18408
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 184 |
Well: | 8 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG14840-RA |
Protein status: | AT18408.pep: gold |
Preliminary Size: | 903 |
Sequenced Size: | 1039 |
Gene | Date | Evidence |
---|---|---|
CG14840 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14840 | 2002-02-26 | Blastp of sequenced clone |
CG14840 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14840 | 2008-04-29 | Release 5.5 accounting |
CG14840 | 2008-08-15 | Release 5.9 accounting |
CG14840 | 2008-12-18 | 5.12 accounting |
1039 bp (1039 high quality bases) assembled on 2002-02-26
GenBank Submission: AY089356
> AT18408.complete TCCAAATATTTGATCGGAATATGCCTGGCACGAAAGCGCTGCTCCTCGTC CTGCTACTGCTGCGTGCGTTCCCTCGACTGGAGAGCTACCACTACCGACC CGCCGAAACGAATGACAAGCAATGCCTGTCCGCATTGTACGGCGATGCCA GCATCGATGGAACTGGTGGGGCGGGCGGTTTGGGAGGCGGATCCGAAGGC TGTGGGGAACCTAATTCGAAGAAAGGGGTTGGCTGCAGCAGCGGAACCGG CGTCTTTGGTCGCGGAGATCCCAAGCAGAAGGCCTCCAACATTGCCCAAA AAGCCGCCCAGGAGGCCAAGGCAGCCAGCGATTCGCAGATGGCAGCTGCC GAGGCGGCTGCATCCCAGGTCAAAAACGAACTGGCCGCCAAGGCAGCTCA ATCCGCTCGTGCGGCGGAGGCGGCACTGGCCGGAAAGCAGCAGATTGTTG AACAGCTGCAGCAGGAGATGACCGAGGCGGATGCGGTTGTCACTGAGGTG ACCTCGTCCCTACAAAACACCCAAGCGAATGCCAATGCCGCCGCATCGGC TGCCCACGAGGCCCAATCGCAACTCAATCAGCTGAAGAACCTTGTGATAG CCGCCACGTCCAATCTGGCCAATATCGAGAACGTGGCCAGTGGAGCGCAG CAGGAGCTGGCCGAGAAGACGCAGCTCCTGGAGGCTGCCAAGCACCGGGT GGAGAATCTAACCCGCCAGATGACCGAGGCCAAGACGGACTTCGAGAAGA CCAAGCAGGCGGCCTACAAAGCGGCCTGTGCTGCAGTGGAGGCCAAGCAG AAGGCACAGAGGTCTCGTCGAATGACCCACCGCCAGCAGGTGCGCTGGGG TCCGCGCAAGATGGCCGGAAAGTTTTCCGGCGCAGGCAGCCAAAATCTAG CACCGAATTCGGGGATCAACTGATCTTTTCTATATTTTGTTACGTTTCGA TTTCGGTTTAATAAGTTTCCTATTAAAAGATAATGGTTTTATAACTAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14840-RA | 1006 | CG14840-RA | 11..1006 | 1..996 | 4980 | 100 | Plus |
CG14841-RA | 956 | CG14841-RA | 719..788 | 743..812 | 200 | 85.7 | Plus |
CG14841-RA | 956 | CG14841-RA | 255..443 | 279..467 | 195 | 73.5 | Plus |
CG11694-RA | 883 | CG11694-RA | 558..635 | 627..704 | 195 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 10085029..10086024 | 996..1 | 4965 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 10086380..10086449 | 812..743 | 200 | 85.7 | Minus |
chr3R | 27901430 | chr3R | 10086725..10086913 | 467..279 | 195 | 73.5 | Minus |
chr3R | 27901430 | chr3R | 4137466..4137543 | 704..627 | 195 | 83.3 | Minus |
chr2R | 21145070 | chr2R | 12713663..12713724 | 744..805 | 190 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 14260203..14261203 | 1001..1 | 5005 | 100 | Minus |
3R | 32079331 | 3R | 14261559..14261628 | 812..743 | 200 | 85.7 | Minus |
3R | 32079331 | 3R | 8311451..8311528 | 704..627 | 195 | 83.3 | Minus |
3R | 32079331 | 3R | 14261904..14262092 | 467..279 | 195 | 73.5 | Minus |
2R | 25286936 | 2R | 16826480..16826541 | 744..805 | 190 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 14001034..14002034 | 1001..1 | 5005 | 100 | Minus |
3R | 31820162 | 3R | 14002390..14002459 | 812..743 | 200 | 85.7 | Minus |
3R | 31820162 | 3R | 14002735..14002923 | 467..279 | 195 | 73.5 | Minus |
3R | 31820162 | 3R | 8052282..8052359 | 704..627 | 195 | 83.3 | Minus |
2R | 25260384 | 2R | 16827679..16827740 | 744..805 | 190 | 87 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 10085029..10086024 | 1..996 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14840-RA | 1..903 | 21..923 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14840-RA | 1..903 | 21..923 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14840-RA | 1..903 | 21..923 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14840-RA | 1..903 | 21..923 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14840-RA | 1..903 | 21..923 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14840-RA | 11..1006 | 1..996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14840-RA | 11..1006 | 1..996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14840-RA | 11..1006 | 1..996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14840-RA | 11..1006 | 1..996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14840-RA | 11..1006 | 1..996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14260208..14261203 | 1..996 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14260208..14261203 | 1..996 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14260208..14261203 | 1..996 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 10085930..10086925 | 1..996 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14001039..14002034 | 1..996 | 100 | Minus |
Translation from 2 to 922
> AT18408.hyp QIFDRNMPGTKALLLVLLLLRAFPRLESYHYRPAETNDKQCLSALYGDAS IDGTGGAGGLGGGSEGCGEPNSKKGVGCSSGTGVFGRGDPKQKASNIAQK AAQEAKAASDSQMAAAEAAASQVKNELAAKAAQSARAAEAALAGKQQIVE QLQQEMTEADAVVTEVTSSLQNTQANANAAASAAHEAQSQLNQLKNLVIA ATSNLANIENVASGAQQELAEKTQLLEAAKHRVENLTRQMTEAKTDFEKT KQAAYKAACAAVEAKQKAQRSRRMTHRQQVRWGPRKMAGKFSGAGSQNLA PNSGIN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14840-PA | 300 | CG14840-PA | 1..300 | 7..306 | 1484 | 100 | Plus |
CG14841-PA | 274 | CG14841-PA | 59..265 | 61..273 | 559 | 59.6 | Plus |
CG34459-PC | 305 | CG34459-PC | 59..295 | 34..268 | 521 | 49.2 | Plus |
CG34459-PB | 305 | CG34459-PB | 59..295 | 34..268 | 521 | 49.2 | Plus |
CG34459-PA | 305 | CG34459-PA | 59..295 | 34..268 | 521 | 49.2 | Plus |
Translation from 20 to 922
> AT18408.pep MPGTKALLLVLLLLRAFPRLESYHYRPAETNDKQCLSALYGDASIDGTGG AGGLGGGSEGCGEPNSKKGVGCSSGTGVFGRGDPKQKASNIAQKAAQEAK AASDSQMAAAEAAASQVKNELAAKAAQSARAAEAALAGKQQIVEQLQQEM TEADAVVTEVTSSLQNTQANANAAASAAHEAQSQLNQLKNLVIAATSNLA NIENVASGAQQELAEKTQLLEAAKHRVENLTRQMTEAKTDFEKTKQAAYK AACAAVEAKQKAQRSRRMTHRQQVRWGPRKMAGKFSGAGSQNLAPNSGIN *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23179-PA | 289 | GF23179-PA | 1..275 | 1..279 | 602 | 74.6 | Plus |
Dana\GF23178-PA | 296 | GF23178-PA | 92..281 | 78..267 | 398 | 68.4 | Plus |
Dana\GF11413-PA | 470 | GF11413-PA | 108..297 | 78..267 | 314 | 57.9 | Plus |
Dana\GF16773-PA | 273 | GF16773-PA | 55..237 | 85..267 | 301 | 56.3 | Plus |
Dana\GF16670-PA | 204 | GF16670-PA | 6..166 | 85..245 | 286 | 59 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21391-PA | 298 | GG21391-PA | 1..298 | 1..300 | 890 | 89.3 | Plus |
Dere\GG20633-PA | 462 | GG20633-PA | 61..286 | 38..262 | 407 | 50.6 | Plus |
Dere\GG21383-PA | 244 | GG21383-PA | 17..230 | 55..267 | 394 | 58.6 | Plus |
Dere\GG11426-PA | 286 | GG11426-PA | 48..238 | 77..267 | 316 | 56.5 | Plus |
Dere\GG17458-PA | 259 | GG17458-PA | 26..256 | 43..277 | 315 | 51.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19678-PA | 273 | GH19678-PA | 12..264 | 12..281 | 549 | 65.8 | Plus |
Dgri\GH19677-PA | 263 | GH19677-PA | 28..261 | 40..271 | 451 | 65.8 | Plus |
Dgri\GH19676-PA | 252 | GH19676-PA | 2..250 | 7..267 | 422 | 60.5 | Plus |
Dgri\GH17423-PA | 238 | GH17423-PA | 20..225 | 56..269 | 338 | 55.1 | Plus |
Dgri\GH19706-PA | 199 | GH19706-PA | 17..199 | 85..267 | 276 | 44.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14840-PA | 300 | CG14840-PA | 1..300 | 1..300 | 1484 | 100 | Plus |
CG14841-PA | 274 | CG14841-PA | 59..265 | 55..267 | 559 | 59.6 | Plus |
CG34459-PC | 305 | CG34459-PC | 59..295 | 28..262 | 521 | 49.2 | Plus |
CG34459-PB | 305 | CG34459-PB | 59..295 | 28..262 | 521 | 49.2 | Plus |
CG34459-PA | 305 | CG34459-PA | 59..295 | 28..262 | 521 | 49.2 | Plus |
CG11694-PA | 261 | CG11694-PA | 6..254 | 9..276 | 496 | 46.6 | Plus |
CG14354-PA | 298 | CG14354-PA | 58..244 | 81..267 | 485 | 56.1 | Plus |
CG14839-PA | 282 | CG14839-PA | 5..260 | 4..265 | 371 | 37.8 | Plus |
CG12985-PA | 370 | CG12985-PA | 121..295 | 87..261 | 360 | 44 | Plus |
CG11698-PA | 262 | CG11698-PA | 50..234 | 87..271 | 320 | 38.4 | Plus |
CG33257-PA | 330 | CG33257-PA | 13..271 | 7..265 | 263 | 30.1 | Plus |
CG11693-PA | 318 | CG11693-PA | 111..283 | 90..262 | 214 | 33.5 | Plus |
CG11693-PB | 323 | CG11693-PB | 116..288 | 90..262 | 214 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24535-PA | 266 | GI24535-PA | 15..266 | 15..293 | 548 | 61.3 | Plus |
Dmoj\GI24533-PA | 270 | GI24533-PA | 64..255 | 79..270 | 447 | 69.3 | Plus |
Dmoj\GI20828-PA | 301 | GI20828-PA | 82..285 | 60..267 | 438 | 57.2 | Plus |
Dmoj\GI24534-PA | 266 | GI24534-PA | 63..256 | 74..267 | 403 | 72.2 | Plus |
Dmoj\GI22752-PA | 265 | GI22752-PA | 37..251 | 37..267 | 341 | 52.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23292-PA | 280 | GL23292-PA | 1..272 | 1..280 | 479 | 60.1 | Plus |
Dper\GL17739-PA | 409 | GL17739-PA | 100..296 | 61..262 | 375 | 53.5 | Plus |
Dper\GL24119-PA | 264 | GL24119-PA | 63..239 | 82..258 | 321 | 61 | Plus |
Dper\GL23291-PA | 219 | GL23291-PA | 4..209 | 5..216 | 305 | 51.4 | Plus |
Dper\GL21537-PA | 289 | GL21537-PA | 59..224 | 79..244 | 286 | 51.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27211-PA | 280 | GA27211-PA | 67..272 | 77..280 | 444 | 71.8 | Plus |
Dpse\GA13287-PA | 278 | GA13287-PA | 4..261 | 5..268 | 426 | 54.5 | Plus |
Dpse\GA27677-PA | 402 | GA27677-PA | 45..292 | 40..262 | 375 | 46.6 | Plus |
Dpse\GA11146-PB | 267 | GA11146-PB | 66..251 | 82..267 | 359 | 61.3 | Plus |
Dpse\GA26323-PA | 289 | GA26323-PA | 59..224 | 79..244 | 298 | 53 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25864-PA | 302 | GM25864-PA | 1..302 | 1..300 | 1025 | 93.7 | Plus |
Dsec\GM25863-PA | 265 | GM25863-PA | 59..261 | 55..263 | 410 | 59.3 | Plus |
Dsec\GM21727-PA | 455 | GM21727-PA | 59..279 | 49..262 | 391 | 52.7 | Plus |
Dsec\GM10266-PA | 296 | GM10266-PA | 59..244 | 82..267 | 314 | 55.9 | Plus |
Dsec\GM26352-PA | 261 | GM26352-PA | 6..223 | 9..245 | 297 | 48.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20435-PA | 302 | GD20435-PA | 1..302 | 1..300 | 1022 | 93.4 | Plus |
Dsim\GD20434-PA | 264 | GD20434-PA | 59..260 | 56..263 | 407 | 59.1 | Plus |
Dsim\GD11222-PA | 470 | GD11222-PA | 74..294 | 49..262 | 397 | 53.2 | Plus |
Dsim\GD21236-PA | 296 | GD21236-PA | 59..244 | 82..267 | 305 | 55.4 | Plus |
Dsim\GD17372-PA | 360 | GD17372-PA | 116..293 | 85..262 | 181 | 42.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22602-PA | 271 | GJ22602-PA | 16..265 | 16..285 | 478 | 61.2 | Plus |
Dvir\GJ20562-PA | 352 | GJ20562-PA | 50..248 | 61..262 | 447 | 58.4 | Plus |
Dvir\GJ22601-PA | 233 | GJ22601-PA | 39..225 | 83..269 | 418 | 78.1 | Plus |
Dvir\GJ22600-PA | 262 | GJ22600-PA | 6..260 | 10..269 | 403 | 61.1 | Plus |
Dvir\GJ22753-PA | 219 | GJ22753-PA | 22..211 | 84..276 | 353 | 57.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10892-PA | 290 | GK10892-PA | 6..261 | 7..262 | 432 | 64 | Plus |
Dwil\GK22021-PA | 418 | GK22021-PA | 112..296 | 78..262 | 418 | 65.4 | Plus |
Dwil\GK14387-PA | 246 | GK14387-PA | 43..240 | 73..271 | 360 | 57.8 | Plus |
Dwil\GK12192-PA | 270 | GK12192-PA | 73..259 | 81..267 | 326 | 49.2 | Plus |
Dwil\GK11064-PA | 264 | GK11064-PA | 2..226 | 1..246 | 288 | 47.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10040-PA | 301 | GE10040-PA | 1..301 | 1..300 | 983 | 89.7 | Plus |
Dyak\GE11823-PA | 449 | GE11823-PA | 11..282 | 7..262 | 427 | 47.4 | Plus |
Dyak\GE10039-PA | 278 | GE10039-PA | 9..264 | 1..267 | 387 | 50.6 | Plus |
Dyak\GE23621-PA | 296 | GE23621-PA | 58..248 | 77..267 | 375 | 56 | Plus |
Dyak\GE24857-PA | 260 | GE24857-PA | 54..244 | 77..267 | 300 | 58.6 | Plus |