BDGP Sequence Production Resources |
Search the DGRC for AT18465
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 184 |
Well: | 65 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG6629-RA |
Protein status: | AT18465.pep: gold |
Preliminary Size: | 842 |
Sequenced Size: | 1001 |
Gene | Date | Evidence |
---|---|---|
CG6629 | 2002-01-01 | Sim4 clustering to Release 2 |
CG6629 | 2002-01-18 | Blastp of sequenced clone |
CG6629 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6629 | 2008-04-29 | Release 5.5 accounting |
CG6629 | 2008-08-15 | Release 5.9 accounting |
CG6629 | 2008-12-18 | 5.12 accounting |
1001 bp (1001 high quality bases) assembled on 2002-01-18
GenBank Submission: AY089360
> AT18465.complete CAACTTGTTAAATTTTTTTTTCTATTCCTATCTAACACTGCCAATTTGTA ACAAAACAAACTTTGTTAAAGAATTCTGAAATTTATTTGACAAAAACTCA AATATAAAAATGAACACTTGTCGCTCATTGGCTCGAGGATTGAATATTTG CAGTCCGCAATTAAGGCACTTGCTCGCCCAAAAACCATTCAACTCGGCTC GTCTTCTGGCTACTAAAGCCCCAAAGGATCATAAGGCTAGTGGACCCACG ACAATTGGACCTAGTGGCGATATCCTCGTTCCGCCTGTCACTTTGAAAGT GATACCCTTTCGTATGCCTCCCGATTTGCCTTATGACGATCGAAATATGC TGCTTGGAAGACAGTTATCGCCACATTTGTCCATCTACAAAATTCAATTG ACTTCCACCTTGTCCGCATTTCTACGAATTAGTGGGTTTGTTCTGGCCGT TTTTGTTTGGTTCGTGGGAATCAGCGGCCTTTGCTTGCAAGGCGATATGG AGGGATTTATAAAGAAAGTCGAAAAATGTGACTGCCACGGCATGGTGACG ATGGCCAAGGTGATGGTGACCATGCCATTTGCCTACCATACAGTCGCCGG AACTCGACATTTGATCTGGTATTTGAACAAGTTTCTCACGATACCAGAGA TCTATGCCACCGGCTATGTGGCTGTGGCTCTAACCATTGCTCTGTCTGCC TTTTTGCTGGCCGTTAAAGTGGGCGAGAAGGTTAAGGAGGAGGTGGTAGA TCTCACAAAAACCAAAAAGGGTCAAAAGGCTAAAAAAGAGGCTCCGAAGG ATGCGAAGAAAGATGCTCCCAAGGATACCAAAAAGGAACCCAAGAAGGAT GCAAAGGACAAGAAGAAAGACGAGGAAGGCAAGTCTGCCAAATGATCAAA TACTATTCTGTTTTGTGTGTTTTATTAGATGACTGTGTAAAGTTTTTTAA GACGTGCTATCCAAATCTAAACGTATTAAGTCTAAAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6629-RA | 1042 | CG6629-RA | 34..1021 | 1..988 | 4925 | 99.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 6940206..6941068 | 121..983 | 100 | <- | Minus |
chr3R | 6941122..6941241 | 1..120 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6629-RA | 1..786 | 110..895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6629-RA | 1..786 | 110..895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6629-RA | 1..786 | 110..895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6629-RA | 1..786 | 110..895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6629-RA | 1..786 | 110..895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6629-RA | 1..983 | 1..983 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6629-RA | 1..983 | 1..983 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6629-RA | 1..983 | 1..983 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6629-RA | 1..983 | 1..983 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6629-RA | 1..983 | 1..983 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11114671..11115533 | 121..983 | 100 | <- | Minus |
3R | 11115587..11115706 | 1..120 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11114671..11115533 | 121..983 | 100 | <- | Minus |
3R | 11115587..11115706 | 1..120 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11114671..11115533 | 121..983 | 100 | <- | Minus |
3R | 11115587..11115706 | 1..120 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 6940393..6941255 | 121..983 | 100 | <- | Minus |
arm_3R | 6941309..6941428 | 1..120 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10855502..10856364 | 121..983 | 100 | <- | Minus |
3R | 10856418..10856537 | 1..120 | 100 | Minus |
Translation from 109 to 894
> AT18465.pep MNTCRSLARGLNICSPQLRHLLAQKPFNSARLLATKAPKDHKASGPTTIG PSGDILVPPVTLKVIPFRMPPDLPYDDRNMLLGRQLSPHLSIYKIQLTST LSAFLRISGFVLAVFVWFVGISGLCLQGDMEGFIKKVEKCDCHGMVTMAK VMVTMPFAYHTVAGTRHLIWYLNKFLTIPEIYATGYVAVALTIALSAFLL AVKVGEKVKEEVVDLTKTKKGQKAKKEAPKDAKKDAPKDTKKEPKKDAKD KKKDEEGKSAK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18264-PA | 281 | GF18264-PA | 1..244 | 1..224 | 661 | 55.1 | Plus |
Dana\GF18258-PA | 152 | GF18258-PA | 8..149 | 60..199 | 250 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17249-PA | 269 | GG17249-PA | 1..216 | 1..216 | 1032 | 88.4 | Plus |
Dere\GG17240-PA | 152 | GG17240-PA | 7..149 | 59..199 | 230 | 41.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19425-PA | 170 | GH19425-PA | 7..169 | 72..235 | 347 | 44.3 | Plus |
Dgri\GH19420-PA | 171 | GH19420-PA | 27..168 | 60..199 | 266 | 40.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6629-PA | 261 | CG6629-PA | 1..261 | 1..261 | 1350 | 100 | Plus |
SdhC-PB | 171 | CG6666-PB | 26..168 | 59..199 | 265 | 41.3 | Plus |
SdhC-PA | 171 | CG6666-PA | 26..168 | 59..199 | 265 | 41.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22631-PA | 229 | GI22631-PA | 43..163 | 73..192 | 350 | 53.7 | Plus |
Dmoj\GI22625-PA | 152 | GI22625-PA | 8..149 | 60..199 | 276 | 42.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12050-PA | 307 | GL12050-PA | 90..252 | 58..219 | 443 | 52.8 | Plus |
Dper\GL12041-PA | 152 | GL12041-PA | 21..149 | 72..199 | 266 | 43.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27966-PA | 235 | GA27966-PA | 18..180 | 58..219 | 448 | 53.4 | Plus |
Dpse\GA26173-PA | 332 | GA26173-PA | 115..277 | 58..219 | 444 | 52.8 | Plus |
Dpse\GA19764-PB | 171 | GA19764-PB | 40..168 | 72..199 | 267 | 43.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26134-PA | 264 | GM26134-PA | 1..216 | 1..216 | 1112 | 96.3 | Plus |
Dsec\GM26120-PA | 171 | GM26120-PA | 26..168 | 59..199 | 231 | 41.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20687-PA | 262 | GD20687-PA | 1..213 | 1..216 | 1090 | 95.4 | Plus |
Dsim\GD20679-PA | 152 | GD20679-PA | 7..149 | 59..199 | 231 | 41.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23876-PA | 269 | GJ23876-PA | 70..227 | 50..210 | 418 | 50.6 | Plus |
Dvir\GJ23871-PA | 170 | GJ23871-PA | 26..167 | 60..199 | 275 | 41.5 | Plus |
Translation from 109 to 894
> AT18465.hyp MNTCRSLARGLNICSPQLRHLLAQKPFNSARLLATKAPKDHKASGPTTIG PSGDILVPPVTLKVIPFRMPPDLPYDDRNMLLGRQLSPHLSIYKIQLTST LSAFLRISGFVLAVFVWFVGISGLCLQGDMEGFIKKVEKCDCHGMVTMAK VMVTMPFAYHTVAGTRHLIWYLNKFLTIPEIYATGYVAVALTIALSAFLL AVKVGEKVKEEVVDLTKTKKGQKAKKEAPKDAKKDAPKDTKKEPKKDAKD KKKDEEGKSAK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6629-PA | 261 | CG6629-PA | 1..261 | 1..261 | 1350 | 100 | Plus |
SdhC-PB | 171 | CG6666-PB | 26..168 | 59..199 | 265 | 41.3 | Plus |
SdhC-PA | 171 | CG6666-PA | 26..168 | 59..199 | 265 | 41.3 | Plus |