BDGP Sequence Production Resources |
Search the DGRC for AT18493
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 184 |
Well: | 93 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG15878-RA |
Protein status: | AT18493.pep: gold |
Preliminary Size: | 1456 |
Sequenced Size: | 1642 |
Gene | Date | Evidence |
---|---|---|
CG15878 | 2002-01-01 | Sim4 clustering to Release 2 |
CG15878 | 2002-05-17 | Blastp of sequenced clone |
CG15878 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15878 | 2008-04-29 | Release 5.5 accounting |
CG15878 | 2008-08-15 | Release 5.9 accounting |
CG15878 | 2008-12-18 | 5.12 accounting |
1642 bp (1642 high quality bases) assembled on 2002-05-17
GenBank Submission: AY118695
> AT18493.complete ACAACATCAAAATTTCCAGAAACAACAGCTTTATCGATATTCCTGGTAGA CCCCGGTGACCCTGGGAGTGTGTTCTCGACCCCCGACAGGAGCAGTCACA CCCCGCCAAGATGTCCTTTCACCGGATCAATGTCAAACAAGCTTCCATAG CCGCCCGCCAGCGGCAGTCGCGGACGACCAGGATGACCCGGCACACCATT TTCAATTTGAAGAGACCCATTACCTTCCAGGTGCGCAAATCGCTGGTGGA GTACGTGGACATGGAGCTAGCGGACATGGACACCTCCGTGTTCTATCAGC GCATCTTTATCCTGGCCAAGAACTGCCACTTGACGCCAGTTGTGTCCAAC GAGGAGTTGCTCGCCGACGCGGTGGTGGAACAGGCTGAGCCTGAACCAGA TGAAGCGGCGCCCATACAGTTCATGGAGGATGTGATCTTCGACAACACTG AAACGGAATCGCCCATGAACACGACGGCGGATCCAGCGCCCATTCCTGCG CCGGAAGAAGGTGCGACGGAAACTGCAGAAGTAGTTACCCACATGTTCCG TTTCAGTGAAGACGATCCAGAAGAAGACTTTGTCGAAGAGGAGGAACTGG AAATGGACACCCAAGCACCCGATCAGCCCAAGGACTTCTTTGCCATCTTC AGCGAGCGCCTGCAGGAGCTGCATAAGCAGTGCAAGGCGCTGGCCATCAC GCCGGATCCCATGTGCGGATTGTTTCTCCACATGGGCGAATACAGCATGC TGATGCTGGAGTCCTCCGAGGACATGATCGGATGCTTCACACGGGCCCTG GCCGATTGCTGTGAGACTTTCTGGTTGATGAATCGCGTCTTCCAGATCGA GGATCACGTGCAGGAGCTCTATACAAAAGAACTTATGTTTCGCCGCATCC CTTCCGTCTTTCTGAACGAGAAGTTCCCCACCTCCACGCCCACCGATGAG TATCTCATGGGAAAACAGCATCTGATCATCAAGGATAAGCTGCTGACCAT CTGCCGGCTGCTCTCGGAGGGTCAGCAAGTGGATCCGGACGGGATCTCCA CGCGAGAAAGCGACATGGAGGACGATATGCCAAAGTCAAAGTCCAAAAGC TCAATCCTAAGCGAACACTTGCCGGTGGAGGTGTTCCGGAAGCACCTGCC CGAGATCCAGCGCATCGAACTGGTTTTGGCATCCACACGATTCTACTACG AGTTGGGAGAGTTCGCCTGGCTCTACGGCCGGGTGCCCTTCTCGCCCGAC GAGGATGGTCTCTTCTGGCCCATACAGAGCAACTACACTCCTCCGAACAT CTTCCGGCGCACTCCCTACGACATAAATCTCACATTTGGTGAGTATGCCG CGGAGGCTAGTAAGAGAAAAACCCAAGGAAGCCTGGTCGGAAGTATAGCT GACGAGGAGGAGGCTCCACCAAATGAAGAGACCCCGCCAAAGACTGAATA AGTGGTTTGGTAATTTAGTTGTATTTTAACCTTAGATTTTGTGTCCCTTG TATTTTCTAAACCGTCAAGCGAACAAACTGTCAATTCTAAAGAATTCGCG CCTCAGCAAGTGTGTTTGTTTTAGCATAAACCTAAAGATTTCGCGTACAA ATAAAGAAATCCCATTTATAAAACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15878-RA | 1631 | CG15878-RA | 6..1631 | 1..1624 | 7880 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 2210279..2211904 | 1624..1 | 7870 | 99.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 2210871..2212498 | 1626..1 | 7880 | 99.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 2210871..2212498 | 1626..1 | 7890 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 2210279..2211904 | 1..1624 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15878-RA | 1..1341 | 111..1451 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15878-RA | 1..1341 | 111..1451 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15878-RA | 1..1341 | 111..1451 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15878-RA | 1..1341 | 111..1451 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15878-RA | 1..1341 | 111..1451 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15878-RA | 6..1631 | 1..1624 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15878-RA | 6..1631 | 1..1624 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15878-RA | 6..1631 | 1..1624 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15878-RA | 6..1631 | 1..1624 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15878-RA | 6..1631 | 1..1624 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2210873..2212498 | 1..1624 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2210873..2212498 | 1..1624 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2210873..2212498 | 1..1624 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 2210873..2212498 | 1..1624 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2210873..2212498 | 1..1624 | 99 | Minus |
Translation from 110 to 1450
> AT18493.hyp MSFHRINVKQASIAARQRQSRTTRMTRHTIFNLKRPITFQVRKSLVEYVD MELADMDTSVFYQRIFILAKNCHLTPVVSNEELLADAVVEQAEPEPDEAA PIQFMEDVIFDNTETESPMNTTADPAPIPAPEEGATETAEVVTHMFRFSE DDPEEDFVEEEELEMDTQAPDQPKDFFAIFSERLQELHKQCKALAITPDP MCGLFLHMGEYSMLMLESSEDMIGCFTRALADCCETFWLMNRVFQIEDHV QELYTKELMFRRIPSVFLNEKFPTSTPTDEYLMGKQHLIIKDKLLTICRL LSEGQQVDPDGISTRESDMEDDMPKSKSKSSILSEHLPVEVFRKHLPEIQ RIELVLASTRFYYELGEFAWLYGRVPFSPDEDGLFWPIQSNYTPPNIFRR TPYDINLTFGEYAAEASKRKTQGSLVGSIADEEEAPPNEETPPKTE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15878-PA | 446 | CG15878-PA | 1..446 | 1..446 | 2334 | 100 | Plus |
Translation from 110 to 1450
> AT18493.pep MSFHRINVKQASIAARQRQSRTTRMTRHTIFNLKRPITFQVRKSLVEYVD MELADMDTSVFYQRIFILAKNCHLTPVVSNEELLADAVVEQAEPEPDEAA PIQFMEDVIFDNTETESPMNTTADPAPIPAPEEGATETAEVVTHMFRFSE DDPEEDFVEEEELEMDTQAPDQPKDFFAIFSERLQELHKQCKALAITPDP MCGLFLHMGEYSMLMLESSEDMIGCFTRALADCCETFWLMNRVFQIEDHV QELYTKELMFRRIPSVFLNEKFPTSTPTDEYLMGKQHLIIKDKLLTICRL LSEGQQVDPDGISTRESDMEDDMPKSKSKSSILSEHLPVEVFRKHLPEIQ RIELVLASTRFYYELGEFAWLYGRVPFSPDEDGLFWPIQSNYTPPNIFRR TPYDINLTFGEYAAEASKRKTQGSLVGSIADEEEAPPNEETPPKTE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24929-PA | 458 | GF24929-PA | 5..458 | 1..446 | 1384 | 60.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14528-PA | 444 | GG14528-PA | 1..444 | 1..446 | 1900 | 86.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16484-PA | 499 | GH16484-PA | 10..454 | 11..419 | 980 | 48.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15878-PA | 446 | CG15878-PA | 1..446 | 1..446 | 2334 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12156-PA | 491 | GI12156-PA | 5..448 | 5..419 | 984 | 48.3 | Plus |
Dmoj\GI12157-PA | 450 | GI12157-PA | 1..436 | 1..398 | 904 | 48 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24625-PA | 406 | GL24625-PA | 277..369 | 327..421 | 350 | 70.5 | Plus |
Dper\GL24625-PA | 406 | GL24625-PA | 6..144 | 4..134 | 294 | 51.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13999-PA | 568 | GA13999-PA | 6..343 | 4..304 | 818 | 52.2 | Plus |
Dpse\GA13999-PA | 568 | GA13999-PA | 440..558 | 327..444 | 349 | 60.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14133-PA | 445 | GM14133-PA | 1..445 | 1..446 | 2142 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13403-PA | 426 | GD13403-PA | 22..426 | 41..446 | 1941 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13435-PA | 475 | GJ13435-PA | 16..432 | 19..419 | 1044 | 53.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12597-PA | 544 | GK12597-PA | 1..483 | 1..419 | 1066 | 47.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20877-PA | 447 | GE20877-PA | 1..447 | 1..446 | 1926 | 84.1 | Plus |