Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
AT18731.complete Sequence
1885 bp (1885 high quality bases) assembled on 2002-09-15
GenBank Submission: BT001331
> AT18731.complete
ATCTTCCATAAGTCTCGCTTTCTTGTATCTAGCCCTTATATTACCCATTG
CTCTGTGTGCTTTTTGTATTCTCCAATGCTGCGGTTTCTTCGAAATTTTA
AGTATTATGCCTGGCAAGAGGTGCGTCGCGGTTGTTCCGTAGTGGCCCCA
CCGGATAGGAGTGATGTGCTTCTGGTGCTGCCAACGGTCTGGCCCTCCGA
GCTTACCAAGAGGATCCGCCCGCTCTCAGTGCCCGACCTGATCGAGAAGT
TCTCCTGCGATGCCCCTGGCGGACAGTTCGCCACAATGTCCGAGTACCTG
CGCAGCGATCCACGGCCCGACGGAGTTCTCCTGCCGGATGAAATTGATCT
GCACCGAAAAATGTCCCTGGACGACCTTAATTCTTATATGCACGCGAAGG
ACGCATTCAAAGAGCCGCACAGGAAAAACCGCATATTTTCGCACGTTCTT
GTGGTGGCCGGAGCTGACTCAGCTCGGAGTTACCCCTTTCGGCAGAGGCC
TGACTTCCTCTATCTTTGCGACTGCTTGAGACCAGGGGCAGCATTGGTTC
TCACCCGCAGCCGAAAGCGAAATACTGGCGCGTTGCTCTTTCTTTCCCAG
GATGTGGACTCCCAGCTGTCCACCATTTTTAGCCATATGCACTACGTGGA
CGACGTTCTGCCCCTCGCAATGCTTAAGAAAAGTTTACTCTGGCTGTTAA
GGGATCACTCGCCCGAGCTATGGCACTTCTACGACCCATCGAGTCCTGTC
AGTTGTATAGTGCAAGAGGTGGCTAATGAAGCCAAGATTCCTATGGGCAA
TCCCCGATACATCCTCCAGTACACACGCACCGTCAAGACCTCGCGGGAGC
TGAGAGCCCTGCGTCGGGCTAACGCCACCGCTGCGGACTCCATGGCGGAG
GTAATCGCACAGCATCATCAGATTCCTCAGGAGCTGGCCGCTTCATTTGA
CTACAAGTGCCGTTTGCGCCACGCTCGTCCCGACGTGACAAAAACTTCGT
GCGGATTGGATGGCAATGGGCTGTGGCAGATGGACGCTGGATGTCAGTAC
GGAGGCTACGAGGGGGGACTGGCCAGATGCTGGCCCAGCTCGGGGCGATT
CACGCCGCCCCAGAAAATGATTTATGGTGCGCTGTTGGACATGCGTCGGG
ATCTGTGCTCGTTGATACAGTACGCAGGATGTGAGGGTGCCGTCCGCACA
CCTCTGGAACTGCACGCCGCCTATTTAATCCTTCTGGCTCGGCACCTAAG
GGAGCTCCGCGTGTTGCCTAAGGGTGTCAGCAGTGCAGCCGAGACAGTGG
AGTTGGCTCGCAAGTACAACTGCTCCCCAGTCGTGGTCTCGCACGTGGGT
CTGGGAAAGCGAGACACCAGTCGCAGACTCCTTGACTATCCCTTCGCTCC
CGGAAACGTGATGTCGCTGCGGCTGTCAATCTCTATTCCCGATGACTGCT
GCCAGGCCTACCCCGAGTTCCGGGGCATTCTTTGTCAGCTTGGCGACACC
CTGCACGTCCGGGATGATTACTCCGTGGATCTACTTACCGCCGCCTGCCC
CAGCGAGCCCCAGGACATAGAAGTCTGTCTACCTGCAAGCCGAACCAGAT
CGCATAGATTGCGGAATGACGGTGATCAAAGTGGATCTTGTGACACACGA
CAATTGCAAAGCCACGGTGACGGCGACTGAGCAAATACATTTGCCCAAGG
AATATCTGATAAGGGCAGTTATTCCGCAAAATCGATATCGCGTATCCACA
TCGCCGGTACATATAAATGTGTTGTATGTTTTGTATATAGGTACTAAACG
CTCATTTGTCATTAAACCCGTTTGCAATTAAAACCCGCCTCATTGGGTAA
ATCCCCCTTTAACGCTCAAAAAAAAAAAAAAAAAA
AT18731.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 18:42:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32454-RA | 1648 | CG32454-RA | 1..1648 | 33..1680 | 8240 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:00:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 22718637..22720503 | 1..1867 | 9335 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:53:07 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:00:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22729734..22731601 | 1..1868 | 9340 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:15:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 22722834..22724701 | 1..1868 | 9340 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-16 06:00:44 has no hits.
AT18731.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:01:23 Download gff for
AT18731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 22718637..22720503 | 1..1867 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:12:54 Download gff for
AT18731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32454-RA | 1..1605 | 76..1680 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:15:18 Download gff for
AT18731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32454-RA | 1..1605 | 76..1680 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:23:20 Download gff for
AT18731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32454-RA | 1..1605 | 76..1680 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:06:13 Download gff for
AT18731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32454-RA | 1..1605 | 76..1680 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:12:55 Download gff for
AT18731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32454-RA | 1..1605 | 76..1680 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:38:52 Download gff for
AT18731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32454-RA | 1..1648 | 33..1680 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:15:18 Download gff for
AT18731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32454-RA | 1..1835 | 33..1867 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:23:20 Download gff for
AT18731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32454-RA | 1..1835 | 33..1867 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:06:13 Download gff for
AT18731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32454-RA | 1..1648 | 33..1680 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:12:55 Download gff for
AT18731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32454-RA | 1..1835 | 33..1867 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:01:23 Download gff for
AT18731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22729734..22731600 | 1..1867 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:01:23 Download gff for
AT18731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22729734..22731600 | 1..1867 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:01:23 Download gff for
AT18731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22729734..22731600 | 1..1867 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:23:20 Download gff for
AT18731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22722834..22724700 | 1..1867 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:38:11 Download gff for
AT18731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22722834..22724700 | 1..1867 | 100 | | Plus |
AT18731.hyp Sequence
Translation from 1 to 1679
> AT18731.hyp
IFHKSRFLVSSPYITHCSVCFLYSPMLRFLRNFKYYAWQEVRRGCSVVAP
PDRSDVLLVLPTVWPSELTKRIRPLSVPDLIEKFSCDAPGGQFATMSEYL
RSDPRPDGVLLPDEIDLHRKMSLDDLNSYMHAKDAFKEPHRKNRIFSHVL
VVAGADSARSYPFRQRPDFLYLCDCLRPGAALVLTRSRKRNTGALLFLSQ
DVDSQLSTIFSHMHYVDDVLPLAMLKKSLLWLLRDHSPELWHFYDPSSPV
SCIVQEVANEAKIPMGNPRYILQYTRTVKTSRELRALRRANATAADSMAE
VIAQHHQIPQELAASFDYKCRLRHARPDVTKTSCGLDGNGLWQMDAGCQY
GGYEGGLARCWPSSGRFTPPQKMIYGALLDMRRDLCSLIQYAGCEGAVRT
PLELHAAYLILLARHLRELRVLPKGVSSAAETVELARKYNCSPVVVSHVG
LGKRDTSRRLLDYPFAPGNVMSLRLSISIPDDCCQAYPEFRGILCQLGDT
LHVRDDYSVDLLTAACPSEPQDIEVCLPASRTRSHRLRNDGDQSGSCDTR
QLQSHGDGD*
AT18731.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:04:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32454-PA | 534 | CG32454-PA | 1..534 | 26..559 | 2835 | 100 | Plus |
CG9581-PA | 545 | CG9581-PA | 92..530 | 114..526 | 365 | 28.1 | Plus |
AT18731.pep Sequence
Translation from 75 to 1679
> AT18731.pep
MLRFLRNFKYYAWQEVRRGCSVVAPPDRSDVLLVLPTVWPSELTKRIRPL
SVPDLIEKFSCDAPGGQFATMSEYLRSDPRPDGVLLPDEIDLHRKMSLDD
LNSYMHAKDAFKEPHRKNRIFSHVLVVAGADSARSYPFRQRPDFLYLCDC
LRPGAALVLTRSRKRNTGALLFLSQDVDSQLSTIFSHMHYVDDVLPLAML
KKSLLWLLRDHSPELWHFYDPSSPVSCIVQEVANEAKIPMGNPRYILQYT
RTVKTSRELRALRRANATAADSMAEVIAQHHQIPQELAASFDYKCRLRHA
RPDVTKTSCGLDGNGLWQMDAGCQYGGYEGGLARCWPSSGRFTPPQKMIY
GALLDMRRDLCSLIQYAGCEGAVRTPLELHAAYLILLARHLRELRVLPKG
VSSAAETVELARKYNCSPVVVSHVGLGKRDTSRRLLDYPFAPGNVMSLRL
SISIPDDCCQAYPEFRGILCQLGDTLHVRDDYSVDLLTAACPSEPQDIEV
CLPASRTRSHRLRNDGDQSGSCDTRQLQSHGDGD*
AT18731.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 04:06:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF20449-PA | 543 | GF20449-PA | 125..530 | 122..499 | 388 | 29.7 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 04:06:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG18008-PA | 545 | GG18008-PA | 123..527 | 123..499 | 398 | 30.8 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 04:06:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH12088-PA | 516 | GH12088-PA | 74..512 | 87..499 | 354 | 26.9 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:26:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32454-PA | 534 | CG32454-PA | 1..534 | 1..534 | 2835 | 100 | Plus |
CG9581-PA | 545 | CG9581-PA | 92..530 | 89..501 | 365 | 28.1 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 04:06:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI11096-PA | 489 | GI11096-PA | 80..485 | 122..499 | 360 | 27 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 04:06:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA21891-PA | 542 | GA21891-PA | 104..528 | 110..505 | 376 | 29.5 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 04:06:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM22689-PA | 254 | GM22689-PA | 61..244 | 319..506 | 246 | 33.2 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 04:06:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ15780-PA | 518 | GJ15780-PA | 79..514 | 89..499 | 333 | 25.5 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 04:06:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK25597-PA | 526 | GK25597-PA | 114..519 | 122..499 | 362 | 27.7 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 04:06:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE17339-PA | 545 | GE17339-PA | 123..535 | 123..506 | 369 | 29.3 | Plus |