Clone AT18731 Report

Search the DGRC for AT18731

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:187
Well:31
Vector:pOTB7
Associated Gene/TranscriptCG32454-RA
Protein status:AT18731.pep: gold
Preliminary Size:1802
Sequenced Size:1885

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG32454 2002-09-15 Blastp of sequenced clone
CG32454 2003-01-01 Sim4 clustering to Release 3
CG32454 2008-04-29 Release 5.5 accounting
CG32454 2008-08-15 Release 5.9 accounting
CG32454 2008-12-18 5.12 accounting

Clone Sequence Records

AT18731.complete Sequence

1885 bp (1885 high quality bases) assembled on 2002-09-15

GenBank Submission: BT001331

> AT18731.complete
ATCTTCCATAAGTCTCGCTTTCTTGTATCTAGCCCTTATATTACCCATTG
CTCTGTGTGCTTTTTGTATTCTCCAATGCTGCGGTTTCTTCGAAATTTTA
AGTATTATGCCTGGCAAGAGGTGCGTCGCGGTTGTTCCGTAGTGGCCCCA
CCGGATAGGAGTGATGTGCTTCTGGTGCTGCCAACGGTCTGGCCCTCCGA
GCTTACCAAGAGGATCCGCCCGCTCTCAGTGCCCGACCTGATCGAGAAGT
TCTCCTGCGATGCCCCTGGCGGACAGTTCGCCACAATGTCCGAGTACCTG
CGCAGCGATCCACGGCCCGACGGAGTTCTCCTGCCGGATGAAATTGATCT
GCACCGAAAAATGTCCCTGGACGACCTTAATTCTTATATGCACGCGAAGG
ACGCATTCAAAGAGCCGCACAGGAAAAACCGCATATTTTCGCACGTTCTT
GTGGTGGCCGGAGCTGACTCAGCTCGGAGTTACCCCTTTCGGCAGAGGCC
TGACTTCCTCTATCTTTGCGACTGCTTGAGACCAGGGGCAGCATTGGTTC
TCACCCGCAGCCGAAAGCGAAATACTGGCGCGTTGCTCTTTCTTTCCCAG
GATGTGGACTCCCAGCTGTCCACCATTTTTAGCCATATGCACTACGTGGA
CGACGTTCTGCCCCTCGCAATGCTTAAGAAAAGTTTACTCTGGCTGTTAA
GGGATCACTCGCCCGAGCTATGGCACTTCTACGACCCATCGAGTCCTGTC
AGTTGTATAGTGCAAGAGGTGGCTAATGAAGCCAAGATTCCTATGGGCAA
TCCCCGATACATCCTCCAGTACACACGCACCGTCAAGACCTCGCGGGAGC
TGAGAGCCCTGCGTCGGGCTAACGCCACCGCTGCGGACTCCATGGCGGAG
GTAATCGCACAGCATCATCAGATTCCTCAGGAGCTGGCCGCTTCATTTGA
CTACAAGTGCCGTTTGCGCCACGCTCGTCCCGACGTGACAAAAACTTCGT
GCGGATTGGATGGCAATGGGCTGTGGCAGATGGACGCTGGATGTCAGTAC
GGAGGCTACGAGGGGGGACTGGCCAGATGCTGGCCCAGCTCGGGGCGATT
CACGCCGCCCCAGAAAATGATTTATGGTGCGCTGTTGGACATGCGTCGGG
ATCTGTGCTCGTTGATACAGTACGCAGGATGTGAGGGTGCCGTCCGCACA
CCTCTGGAACTGCACGCCGCCTATTTAATCCTTCTGGCTCGGCACCTAAG
GGAGCTCCGCGTGTTGCCTAAGGGTGTCAGCAGTGCAGCCGAGACAGTGG
AGTTGGCTCGCAAGTACAACTGCTCCCCAGTCGTGGTCTCGCACGTGGGT
CTGGGAAAGCGAGACACCAGTCGCAGACTCCTTGACTATCCCTTCGCTCC
CGGAAACGTGATGTCGCTGCGGCTGTCAATCTCTATTCCCGATGACTGCT
GCCAGGCCTACCCCGAGTTCCGGGGCATTCTTTGTCAGCTTGGCGACACC
CTGCACGTCCGGGATGATTACTCCGTGGATCTACTTACCGCCGCCTGCCC
CAGCGAGCCCCAGGACATAGAAGTCTGTCTACCTGCAAGCCGAACCAGAT
CGCATAGATTGCGGAATGACGGTGATCAAAGTGGATCTTGTGACACACGA
CAATTGCAAAGCCACGGTGACGGCGACTGAGCAAATACATTTGCCCAAGG
AATATCTGATAAGGGCAGTTATTCCGCAAAATCGATATCGCGTATCCACA
TCGCCGGTACATATAAATGTGTTGTATGTTTTGTATATAGGTACTAAACG
CTCATTTGTCATTAAACCCGTTTGCAATTAAAACCCGCCTCATTGGGTAA
ATCCCCCTTTAACGCTCAAAAAAAAAAAAAAAAAA

AT18731.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:42:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG32454-RA 1648 CG32454-RA 1..1648 33..1680 8240 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:00:47
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 22718637..22720503 1..1867 9335 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:53:07 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:00:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22729734..22731601 1..1868 9340 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:15:33
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 22722834..22724701 1..1868 9340 100 Plus
Blast to na_te.dros performed on 2019-03-16 06:00:44 has no hits.

AT18731.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:01:23 Download gff for AT18731.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 22718637..22720503 1..1867 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:12:54 Download gff for AT18731.complete
Subject Subject Range Query Range Percent Splice Strand
CG32454-RA 1..1605 76..1680 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:15:18 Download gff for AT18731.complete
Subject Subject Range Query Range Percent Splice Strand
CG32454-RA 1..1605 76..1680 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:23:20 Download gff for AT18731.complete
Subject Subject Range Query Range Percent Splice Strand
CG32454-RA 1..1605 76..1680 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:06:13 Download gff for AT18731.complete
Subject Subject Range Query Range Percent Splice Strand
CG32454-RA 1..1605 76..1680 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:12:55 Download gff for AT18731.complete
Subject Subject Range Query Range Percent Splice Strand
CG32454-RA 1..1605 76..1680 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:38:52 Download gff for AT18731.complete
Subject Subject Range Query Range Percent Splice Strand
CG32454-RA 1..1648 33..1680 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:15:18 Download gff for AT18731.complete
Subject Subject Range Query Range Percent Splice Strand
CG32454-RA 1..1835 33..1867 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:23:20 Download gff for AT18731.complete
Subject Subject Range Query Range Percent Splice Strand
CG32454-RA 1..1835 33..1867 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:06:13 Download gff for AT18731.complete
Subject Subject Range Query Range Percent Splice Strand
CG32454-RA 1..1648 33..1680 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:12:55 Download gff for AT18731.complete
Subject Subject Range Query Range Percent Splice Strand
CG32454-RA 1..1835 33..1867 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:01:23 Download gff for AT18731.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22729734..22731600 1..1867 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:01:23 Download gff for AT18731.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22729734..22731600 1..1867 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:01:23 Download gff for AT18731.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22729734..22731600 1..1867 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:23:20 Download gff for AT18731.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22722834..22724700 1..1867 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:38:11 Download gff for AT18731.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22722834..22724700 1..1867 100   Plus

AT18731.hyp Sequence

Translation from 1 to 1679

> AT18731.hyp
IFHKSRFLVSSPYITHCSVCFLYSPMLRFLRNFKYYAWQEVRRGCSVVAP
PDRSDVLLVLPTVWPSELTKRIRPLSVPDLIEKFSCDAPGGQFATMSEYL
RSDPRPDGVLLPDEIDLHRKMSLDDLNSYMHAKDAFKEPHRKNRIFSHVL
VVAGADSARSYPFRQRPDFLYLCDCLRPGAALVLTRSRKRNTGALLFLSQ
DVDSQLSTIFSHMHYVDDVLPLAMLKKSLLWLLRDHSPELWHFYDPSSPV
SCIVQEVANEAKIPMGNPRYILQYTRTVKTSRELRALRRANATAADSMAE
VIAQHHQIPQELAASFDYKCRLRHARPDVTKTSCGLDGNGLWQMDAGCQY
GGYEGGLARCWPSSGRFTPPQKMIYGALLDMRRDLCSLIQYAGCEGAVRT
PLELHAAYLILLARHLRELRVLPKGVSSAAETVELARKYNCSPVVVSHVG
LGKRDTSRRLLDYPFAPGNVMSLRLSISIPDDCCQAYPEFRGILCQLGDT
LHVRDDYSVDLLTAACPSEPQDIEVCLPASRTRSHRLRNDGDQSGSCDTR
QLQSHGDGD*

AT18731.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:04:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG32454-PA 534 CG32454-PA 1..534 26..559 2835 100 Plus
CG9581-PA 545 CG9581-PA 92..530 114..526 365 28.1 Plus

AT18731.pep Sequence

Translation from 75 to 1679

> AT18731.pep
MLRFLRNFKYYAWQEVRRGCSVVAPPDRSDVLLVLPTVWPSELTKRIRPL
SVPDLIEKFSCDAPGGQFATMSEYLRSDPRPDGVLLPDEIDLHRKMSLDD
LNSYMHAKDAFKEPHRKNRIFSHVLVVAGADSARSYPFRQRPDFLYLCDC
LRPGAALVLTRSRKRNTGALLFLSQDVDSQLSTIFSHMHYVDDVLPLAML
KKSLLWLLRDHSPELWHFYDPSSPVSCIVQEVANEAKIPMGNPRYILQYT
RTVKTSRELRALRRANATAADSMAEVIAQHHQIPQELAASFDYKCRLRHA
RPDVTKTSCGLDGNGLWQMDAGCQYGGYEGGLARCWPSSGRFTPPQKMIY
GALLDMRRDLCSLIQYAGCEGAVRTPLELHAAYLILLARHLRELRVLPKG
VSSAAETVELARKYNCSPVVVSHVGLGKRDTSRRLLDYPFAPGNVMSLRL
SISIPDDCCQAYPEFRGILCQLGDTLHVRDDYSVDLLTAACPSEPQDIEV
CLPASRTRSHRLRNDGDQSGSCDTRQLQSHGDGD*

AT18731.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 04:06:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20449-PA 543 GF20449-PA 125..530 122..499 388 29.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 04:06:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18008-PA 545 GG18008-PA 123..527 123..499 398 30.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 04:06:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12088-PA 516 GH12088-PA 74..512 87..499 354 26.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:26:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG32454-PA 534 CG32454-PA 1..534 1..534 2835 100 Plus
CG9581-PA 545 CG9581-PA 92..530 89..501 365 28.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 04:06:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11096-PA 489 GI11096-PA 80..485 122..499 360 27 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 04:06:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21891-PA 542 GA21891-PA 104..528 110..505 376 29.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 04:06:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22689-PA 254 GM22689-PA 61..244 319..506 246 33.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 04:06:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15780-PA 518 GJ15780-PA 79..514 89..499 333 25.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 04:06:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25597-PA 526 GK25597-PA 114..519 122..499 362 27.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 04:06:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17339-PA 545 GE17339-PA 123..535 123..506 369 29.3 Plus