AT18936.complete Sequence
708 bp (708 high quality bases) assembled on 2004-01-09
GenBank Submission: BT011409
> AT18936.complete
CGCCAACAATTCTTTACAATTAAAAAGCATGTCTATAGAAAAAATCTCCT
CCGAGCTGCGTAAGATGATAATATCTGACAATCCAATCGAAGCAACAACT
TTCGATAAATCTGCAATAGAGGCAACTTTGGATTCCAACAAATTCGAAGA
TCTACGAATTCCGAAGCATACACTGAAGCAAAAGTTTCTTCTTCGAAAGT
CAATAATTGAACATCCCTTTAAAAGAATTCGTGCCGAAGGAGTGGATTGG
GCTCACAAAATTCGAGACACCGACGAAGAGAAGGAATCTAATTGGGCAAA
GATTGCGACTGGAAAGGTTTCTGGCAATGCCTACGATCTTAAAACCATGA
TGAGCGAGTGTGAAAATATTTGTGGTTACGGAAACGCCATAAACTTGACG
GTCCCAAGGGTGGACAAACTACAGGATCTGGCTAAATCGATCCCAACGGA
TCCCGATACAGTCTACCTGACCTGTCAATGTGATGATATTTTCTCTAATG
GAGGCACAGAAGCTCCGACTCAAAGCCCCGACGAAGTTAATTTCGAAGAG
CTGTCCAGCTACTTCGAAAATATGCTCAACATACCCAAGAATCTTCCGCT
CAGCGCTGAAATAATGTATACTTAATGATTGGAACGGTGTGTGTATTGTT
ATATTTAGAGTAAAAAAAGATATAAATCATTTTAAAAAAAAAAAAAAAAA
AAAAAAAA
AT18936.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 18:12:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30487-RA | 728 | CG30487-RA | 46..728 | 1..683 | 3415 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 12:06:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 8824941..8825623 | 683..1 | 3415 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:53:15 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 12:06:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12937615..12938298 | 684..1 | 3420 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:54:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 12938814..12939497 | 684..1 | 3420 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 12:06:47 has no hits.
AT18936.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 12:08:02 Download gff for
AT18936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 8824941..8825623 | 1..683 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:13:08 Download gff for
AT18936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30487-RA | 1..597 | 29..625 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:43:54 Download gff for
AT18936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30487-RA | 1..597 | 29..625 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 13:07:26 Download gff for
AT18936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30487-RA | 1..597 | 29..625 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:32:56 Download gff for
AT18936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30487-RA | 1..597 | 29..625 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:36:46 Download gff for
AT18936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30487-RA | 1..597 | 29..625 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:54:19 Download gff for
AT18936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30487-RA | 46..678 | 1..633 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:43:54 Download gff for
AT18936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30487-RA | 46..728 | 1..683 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:07:26 Download gff for
AT18936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30487-RA | 46..728 | 1..683 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:32:56 Download gff for
AT18936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30487-RA | 46..678 | 1..633 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:36:46 Download gff for
AT18936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30487-RA | 46..728 | 1..683 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:08:02 Download gff for
AT18936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12937616..12938298 | 1..683 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:08:02 Download gff for
AT18936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12937616..12938298 | 1..683 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:08:02 Download gff for
AT18936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12937616..12938298 | 1..683 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:07:26 Download gff for
AT18936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8825121..8825803 | 1..683 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:05:21 Download gff for
AT18936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12938815..12939497 | 1..683 | 100 | | Minus |
AT18936.hyp Sequence
Translation from 1 to 624
> AT18936.hyp
ANNSLQLKSMSIEKISSELRKMIISDNPIEATTFDKSAIEATLDSNKFED
LRIPKHTLKQKFLLRKSIIEHPFKRIRAEGVDWAHKIRDTDEEKESNWAK
IATGKVSGNAYDLKTMMSECENICGYGNAINLTVPRVDKLQDLAKSIPTD
PDTVYLTCQCDDIFSNGGTEAPTQSPDEVNFEELSSYFENMLNIPKNLPL
SAEIMYT*
AT18936.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:05:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30487-PA | 198 | CG30487-PA | 1..198 | 10..207 | 1031 | 100 | Plus |
AT18936.pep Sequence
Translation from 28 to 624
> AT18936.pep
MSIEKISSELRKMIISDNPIEATTFDKSAIEATLDSNKFEDLRIPKHTLK
QKFLLRKSIIEHPFKRIRAEGVDWAHKIRDTDEEKESNWAKIATGKVSGN
AYDLKTMMSECENICGYGNAINLTVPRVDKLQDLAKSIPTDPDTVYLTCQ
CDDIFSNGGTEAPTQSPDEVNFEELSSYFENMLNIPKNLPLSAEIMYT*
AT18936.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:41:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG22538-PA | 184 | GG22538-PA | 1..184 | 1..198 | 479 | 53.9 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:43:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30487-PA | 198 | CG30487-PA | 1..198 | 1..198 | 1031 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:41:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM20323-PA | 172 | GM20323-PA | 1..172 | 1..198 | 697 | 70.7 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:41:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD25801-PA | 176 | GD25801-PA | 1..176 | 1..198 | 739 | 72.7 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:41:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE13409-PA | 201 | GE13409-PA | 1..201 | 1..198 | 545 | 57.6 | Plus |