BDGP Sequence Production Resources |
Search the DGRC for AT18937
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 189 |
Well: | 37 |
Vector: | pOTB7 |
Associated Gene/Transcript | PGAP5-RB |
Protein status: | AT18937.pep: gold |
Sequenced Size: | 1437 |
Gene | Date | Evidence |
---|---|---|
CG8455 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8455 | 2002-03-19 | Blastp of sequenced clone |
CG8455 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8455 | 2008-04-29 | Release 5.5 accounting |
CG8455 | 2008-08-15 | Release 5.9 accounting |
CG8455 | 2008-12-18 | 5.12 accounting |
1437 bp (1437 high quality bases) assembled on 2002-03-19
GenBank Submission: AY094655
> AT18937.complete CTGAAATGCGCTTTCTTTATGCCTGCTTTGTGATCGTGCTGTGCGCCCTG ATCTTCTGCGAATATGTGGCGGACTTTGTGGTGCTGCAAAAGTGCAAGTG GCCGGAGATAAAGCGAAAGAAGTATGTGGACGATCCGCTTAGGGCAATGA TTCTAGCGGATCCGCATCTGCTGGGACCGCATCGTGGTCACTGGCTGGAC AAGCTCTACCGGGAGTGGCACATGACGCGGGCCTTTCAGGCGGCATCACG TCTGTTCCAGCCCGACGTGGTCTTCGTCTTGGGCGATTTGTTCGACGAGG GCGACATGGTCAGCGACAAGCAGTTTCAGGAATATGTGTGGCGCTACCTG AAGATGTTCCACCTACCACCGGGAATTCCGCTCATCAGTGTCGCGGGAAA TCATGACGTGGGCTTCCATTACAAAATGCATCCCTTCTTTATGTCGCGTT TTGAGAGTTATCTGAACAACTCCTCGGTCAATTTGTACACCATTAAACAA ATCCATTTTGTGGTGATAAATTCGATGGCTATGGAAGGTGATGGTTGCAT GTTTTGCACCCAGGCCGAGGATCAGTTGAAAAACATTTCGCGGACTTTGT ACTGCATGAAGTATCCACTAGAGGCGGAGTGCGCTCGCACCAGGCGGCAC CCGTACAGCCAGCCAATTCTATTGCAGCACTTTCCCACCTACCGCATTTC GGATACCATGTGCGAGGAGCACGATGCTCCGTACATCGAGGCGTTCCGAG AGCGGTTTCATGTGCTCTCCAAGGATGCCACGGATATGCTGGGAGAGCTT CTTAAGCCAAGGCTGGCATTCGCCGGTCATTCACATCACTTCTGTCACAG TGTAAATCGACTGGGCATCGATGAGTACACGGTGGCCTCATTCAGCTGGC GAAACAAAGTTAATCCCAGCTTTATGCTGGCCACTATAACCCCCGATGAC TATGTGGTTTCCAAGTGCAAAATGCTGCCACAGCAGTTTGTCTTCAATAG CTATCTGAGTGCTGGCATTCTTTGCCTAATTGTCATCGGGTTCCAGCTAC GAAAGTGCATCCAAAGCAGAAGACAGTCGTCGGCTGTAGATCATCGGAAG GTTAATTATTTAGACTAGATACGCCAGATTCCAGACTCAGATCCCAGATC CAGATCCAGACAGAGGTCATATCATTCCTGCTGCTTTGCAACCGCTTAAC TATATTCTAGGTGTACAAAATTCGGATAGTATGTATGATCTATTTATTGA ATTTATCACAGACATTATGCTTGTAAAGTCAAACGGAATACATAATGAGA CACAGTCTGCTGACTACAAATCGAAAATGCCAAAAAAATAATGCTTGAAC AAAGGCTGGAAAGTAAAGAACGGATACAAACAGAACAATTAAATAAAGCT ATATTATAATACAATAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8455-RB | 1575 | CG8455-RB | 161..1573 | 1..1413 | 7020 | 99.7 | Plus |
CG8455.a | 1570 | CG8455.a | 161..1568 | 1..1413 | 6920 | 99.4 | Plus |
CG8455-RA | 1656 | CG8455-RA | 161..1268 | 1..1108 | 5495 | 99.7 | Plus |
CG8455-RA | 1656 | CG8455-RA | 1334..1638 | 1109..1413 | 1525 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 8198525..8199030 | 425..930 | 2530 | 100 | Plus |
chr2L | 23010047 | chr2L | 8198034..8198457 | 1..424 | 2120 | 100 | Plus |
chr2L | 23010047 | chr2L | 8199342..8199648 | 1109..1415 | 1535 | 100 | Plus |
chr2L | 23010047 | chr2L | 8199097..8199276 | 929..1108 | 900 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 8199529..8200034 | 425..930 | 2500 | 99.6 | Plus |
2L | 23513712 | 2L | 8199038..8199461 | 1..424 | 2105 | 99.8 | Plus |
2L | 23513712 | 2L | 8200346..8200650 | 1109..1413 | 1525 | 100 | Plus |
2L | 23513712 | 2L | 8200101..8200280 | 929..1108 | 900 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 8199529..8200034 | 425..930 | 2500 | 99.6 | Plus |
2L | 23513712 | 2L | 8199038..8199461 | 1..424 | 2105 | 99.7 | Plus |
2L | 23513712 | 2L | 8200346..8200650 | 1109..1413 | 1525 | 100 | Plus |
2L | 23513712 | 2L | 8200101..8200280 | 929..1108 | 900 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 8198034..8198457 | 1..424 | 100 | -> | Plus |
chr2L | 8198525..8199029 | 425..929 | 100 | -> | Plus |
chr2L | 8199098..8199276 | 930..1108 | 100 | -> | Plus |
chr2L | 8199342..8199648 | 1109..1415 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8455-RB | 1..1113 | 6..1118 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8455-RB | 1..1113 | 6..1118 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PGAP5-RB | 1..1113 | 6..1118 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8455-RB | 1..1113 | 6..1118 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PGAP5-RB | 1..1113 | 6..1118 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8455-RB | 80..1493 | 1..1415 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8455-RB | 80..1493 | 1..1415 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PGAP5-RB | 86..1499 | 1..1415 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8455-RB | 80..1493 | 1..1415 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PGAP5-RB | 86..1499 | 1..1415 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8199038..8199461 | 1..424 | 99 | -> | Plus |
2L | 8199529..8200033 | 425..929 | 99 | -> | Plus |
2L | 8200102..8200280 | 930..1108 | 100 | -> | Plus |
2L | 8200346..8200651 | 1109..1415 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8199038..8199461 | 1..424 | 99 | -> | Plus |
2L | 8199529..8200033 | 425..929 | 99 | -> | Plus |
2L | 8200102..8200280 | 930..1108 | 100 | -> | Plus |
2L | 8200346..8200651 | 1109..1415 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8199038..8199461 | 1..424 | 99 | -> | Plus |
2L | 8199529..8200033 | 425..929 | 99 | -> | Plus |
2L | 8200102..8200280 | 930..1108 | 100 | -> | Plus |
2L | 8200346..8200651 | 1109..1415 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 8200102..8200280 | 930..1108 | 100 | -> | Plus |
arm_2L | 8200346..8200651 | 1109..1415 | 99 | Plus | |
arm_2L | 8199038..8199461 | 1..424 | 99 | -> | Plus |
arm_2L | 8199529..8200033 | 425..929 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8199038..8199461 | 1..424 | 99 | -> | Plus |
2L | 8199529..8200033 | 425..929 | 99 | -> | Plus |
2L | 8200102..8200280 | 930..1108 | 100 | -> | Plus |
2L | 8200346..8200651 | 1109..1415 | 99 | Plus |
Translation from 2 to 1117
> AT18937.hyp EMRFLYACFVIVLCALIFCEYVADFVVLQKCKWPEIKRKKYVDDPLRAMI LADPHLLGPHRGHWLDKLYREWHMTRAFQAASRLFQPDVVFVLGDLFDEG DMVSDKQFQEYVWRYLKMFHLPPGIPLISVAGNHDVGFHYKMHPFFMSRF ESYLNNSSVNLYTIKQIHFVVINSMAMEGDGCMFCTQAEDQLKNISRTLY CMKYPLEAECARTRRHPYSQPILLQHFPTYRISDTMCEEHDAPYIEAFRE RFHVLSKDATDMLGELLKPRLAFAGHSHHFCHSVNRLGIDEYTVASFSWR NKVNPSFMLATITPDDYVVSKCKMLPQQFVFNSYLSAGILCLIVIGFQLR KCIQSRRQSSAVDHRKVNYLD*
Translation from 5 to 1117
> AT18937.pep MRFLYACFVIVLCALIFCEYVADFVVLQKCKWPEIKRKKYVDDPLRAMIL ADPHLLGPHRGHWLDKLYREWHMTRAFQAASRLFQPDVVFVLGDLFDEGD MVSDKQFQEYVWRYLKMFHLPPGIPLISVAGNHDVGFHYKMHPFFMSRFE SYLNNSSVNLYTIKQIHFVVINSMAMEGDGCMFCTQAEDQLKNISRTLYC MKYPLEAECARTRRHPYSQPILLQHFPTYRISDTMCEEHDAPYIEAFRER FHVLSKDATDMLGELLKPRLAFAGHSHHFCHSVNRLGIDEYTVASFSWRN KVNPSFMLATITPDDYVVSKCKMLPQQFVFNSYLSAGILCLIVIGFQLRK CIQSRRQSSAVDHRKVNYLD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14624-PA | 368 | GF14624-PA | 1..366 | 1..365 | 1811 | 89.6 | Plus |
Dana\GF20377-PA | 366 | GF20377-PA | 1..365 | 1..362 | 1511 | 76.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10521-PA | 367 | GG10521-PA | 1..367 | 1..367 | 1956 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11510-PA | 370 | GH11510-PA | 1..370 | 1..367 | 1693 | 81.9 | Plus |
Dgri\GH21045-PA | 355 | GH21045-PA | 9..144 | 2..136 | 150 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PGAP5-PB | 370 | CG8455-PB | 1..370 | 1..370 | 2005 | 100 | Plus |
PGAP5-PC | 367 | CG8455-PC | 1..367 | 1..367 | 1988 | 100 | Plus |
PGAP5-PA | 367 | CG8455-PA | 1..367 | 1..367 | 1988 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17006-PA | 368 | GI17006-PA | 1..360 | 1..360 | 1600 | 78.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18726-PA | 370 | GL18726-PA | 1..370 | 1..367 | 1733 | 85.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21091-PA | 370 | GA21091-PA | 1..370 | 1..367 | 1733 | 85.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16830-PA | 367 | GM16830-PA | 1..367 | 1..367 | 1971 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23512-PA | 367 | GD23512-PA | 1..367 | 1..367 | 1978 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24314-PA | 369 | GJ24314-PA | 1..358 | 1..358 | 1715 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15156-PA | 368 | GK15156-PA | 1..364 | 1..365 | 1691 | 84.4 | Plus |
Dwil\GK15194-PA | 370 | GK15194-PA | 1..362 | 1..358 | 1215 | 61 | Plus |
Dwil\GK21981-PA | 356 | GK21981-PA | 9..144 | 2..136 | 149 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18742-PA | 367 | GE18742-PA | 1..367 | 1..367 | 1971 | 98.6 | Plus |