AT19083.complete Sequence
893 bp (893 high quality bases) assembled on 2005-07-22
GenBank Submission: BT023798
> AT19083.complete
GAGGGGGGCTGGATATGGAAGGGGGGCTTTGGGAAGCCCAGAACAGGAGT
AGGCAGCAACAGGGCGAAAAAAAAAAAACGGCCATCAATGGAGGCAGCTC
CTCTTGGTTGCAAGTGCAACGGCTCCTAGTTGGCGAGCTGGGGCATTTCC
CCGCCATCCCGTCTCTGTCGCTGTCCCAGTGTTTTTGTGTTTTTGCCATT
CGGTCGCTTTTGGTTCGGTTCGCTGGTTCGACGTTTGGGCCCGCTCGGTC
CCGACGTGTTTTTTGTTGGGTGTCATACAAAAACATTTTGCCGCCAAACA
GAATGGCTAAGGCAGCTCCTCCTGCTGCTCCTCCGGCTCCTGCTGCTGCT
GCTGCTGCTGCTGCCCAACCTGTCAACCGCCTTCCCCCTGGACTCGTCCC
ACTCTCTGCTCCTTCTCCACCAGCGATGCAAACTTTGCGAATCACTTTTT
TGGTTGCATGACCAACGCACAGCACAGCACACCGTGGGCTTGCGTAAGTT
CGGGCTTAAAGTTTGGCCAACGCGGCGTATGAGCAATGTTTAAAGGGTGC
TACCTGACAGAGTTCAGTCCACTCACCTGACAAACAACTGCTCCTGATTG
TTTACCCGCCAGGACACGACCGTCGCACCTGCAAACAGAAGGAATGCTGT
GGAATAATAACTAAAGATGTGCGGATTTCTAGAAGGATATAGGGACTACA
TGTACTAATCAAATAAGAAGAAATATATATCAAGAGGTATTAACTATGCC
CCCAGTAAATCGAGTTCAATTCAAGCTTTCAGCGGAACTTAACTAGTTTT
CAGTTTTGTACAATCGTACTATGATATAGTAAAGTTAAGAACTAGAAATA
AATGTAATATAACTATGTAAAAAAAAAAAAAAAAAAAAAAAAA
AT19083.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:32:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31845-RA | 869 | CG31845-RA | 1..869 | 1..869 | 4330 | 99.8 | Plus |
CG9008-RB | 2202 | CG9008-RB | 519..572 | 629..576 | 270 | 100 | Minus |
CG9008.a | 1478 | CG9008.a | 520..572 | 629..577 | 265 | 100 | Minus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:51:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 13775907..13776548 | 1..642 | 3210 | 100 | Plus |
chr2L | 23010047 | chr2L | 13776603..13776836 | 635..868 | 1155 | 99.6 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:53:28 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:51:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13777195..13777836 | 1..642 | 3195 | 99.8 | Plus |
2L | 23513712 | 2L | 13777891..13778125 | 635..869 | 1160 | 99.6 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:23:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13777195..13777836 | 1..642 | 3195 | 99.8 | Plus |
2L | 23513712 | 2L | 13777891..13778125 | 635..869 | 1160 | 99.5 | Plus |
Blast to na_te.dros performed on 2019-03-16 04:51:22 has no hits.
AT19083.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:52:08 Download gff for
AT19083.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 13775907..13776547 | 1..641 | 93 | -> | Plus |
chr2L | 13776610..13776836 | 642..868 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:13:27 Download gff for
AT19083.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31845-RA | 1..447 | 15..461 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:56:34 Download gff for
AT19083.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31845-RA | 1..447 | 15..461 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:37:18 Download gff for
AT19083.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31845-RA | 1..447 | 15..461 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:34:47 Download gff for
AT19083.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31845-RA | 1..868 | 1..868 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:56:34 Download gff for
AT19083.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31845-RA | 1..868 | 1..868 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:43:34 Download gff for
AT19083.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9008-RA | 507..573 | 577..642 | 92 | | Minus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:37:18 Download gff for
AT19083.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31845-RA | 1..868 | 1..868 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:52:15 Download gff for
AT19083.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9008-RA | 507..573 | 577..642 | 92 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:52:08 Download gff for
AT19083.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13777195..13777835 | 1..641 | 99 | -> | Plus |
2L | 13777898..13778124 | 642..868 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:52:08 Download gff for
AT19083.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13777195..13777835 | 1..641 | 99 | -> | Plus |
2L | 13777898..13778124 | 642..868 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:52:08 Download gff for
AT19083.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13777195..13777835 | 1..641 | 99 | -> | Plus |
2L | 13777898..13778124 | 642..868 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:43:34 Download gff for
AT19083.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13777195..13777835 | 1..641 | 99 | -> | Plus |
arm_2L | 13777898..13778124 | 642..868 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:43:34 Download gff for
AT19083.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13777195..13777835 | 1..641 | 99 | -> | Plus |
arm_2L | 13777898..13778124 | 642..868 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:15:55 Download gff for
AT19083.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13777195..13777835 | 1..641 | 99 | -> | Plus |
2L | 13777898..13778124 | 642..868 | 100 | | Plus |
AT19083.hyp Sequence
Translation from 2 to 460
> AT19083.hyp
GELDMEGGLWEAQNRSRQQQGEKKKTAINGGSSSWLQVQRLLVGELGHFP
AIPSLSLSQCFCVFAIRSLLVRFAGSTFGPARSRRVFCWVSYKNILPPNR
MAKAAPPAAPPAPAAAAAAAAQPVNRLPPGLVPLSAPSPPAMQTLRITFL
VA*
Sequence AT19083.hyp has no blast hits.
AT19083.pep Sequence
Translation from 2 to 460
> AT19083.pep
GGLDMEGGLWEAQNRSRQQQGEKKKTAINGGSSSWLQVQRLLVGELGHFP
AIPSLSLSQCFCVFAIRSLLVRFAGSTFGPARSRRVFCWVSYKNILPPNR
MAKAAPPAAPPAPAAAAAAAAQPVNRLPPGLVPLSAPSPPAMQTLRITFL
VA*
AT19083.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:38:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF20034-PA | 104 | GF20034-PA | 29..90 | 17..88 | 132 | 45.8 | Plus |