BDGP Sequence Production Resources |
Search the DGRC for AT19154
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 191 |
Well: | 54 |
Vector: | pOTB7 |
Associated Gene/Transcript | Scox-RA |
Protein status: | AT19154.pep: gold |
Preliminary Size: | 885 |
Sequenced Size: | 999 |
Gene | Date | Evidence |
---|---|---|
CG8885 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8885 | 2002-02-22 | Blastp of sequenced clone |
CG8885 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8885 | 2008-04-29 | Release 5.5 accounting |
CG8885 | 2008-08-15 | Release 5.9 accounting |
CG8885 | 2008-12-18 | 5.12 accounting |
999 bp (999 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089369
> AT19154.complete GTAAAGCCTTCAAATTTCTGAAACCGGGCGTAAGATGTCCCGCTCCCTGC AACGCTTAGTGGGCAGCTGTCGTCGCTGGGCACAACAGCCCGCAATTCGT CATTATGCCGCTCCCGCAGATTCCACTAAAGGCAAGGGTCCGATCTCTTG GAGAAGTCTGGCCGTCATTGGAGCCCTTGGAGCCGGAGGAGTGGGCTTCA TGCTGTACGTGAAGAGCGAGAAGGATGAGGCGAGAATGAAGGAGCGTCAG CGGCAATTGGGAAAAGCAGCCATCGGCGGCAGTTGGGAATTAGTTGATTC GCAGGGAGCTGTTCGCAAATCGGAGGACTTCTTAGGCAAGTGGCTGCTCA TCTATTTTGGCTTCACCCACTGCCCGGATATTTGTCCCGATGAGCTAGAG AAGATGGCCGCCGTCGTCGATGAAGTTGAAAAGTCCCCGCAAACGCCAGC AGTGCAGCCCATCTTTATCACCGTTGACCCAGAACGTGACTCCAAAGAGG TGGTGGCCAAATACGTAAAAGAGTTCTCCCCCAAACTGCTGGGACTCACG GGAACCGTCGAACAAATCCGCAAAGTGTGCAAGGCCTTCAGGGTTTATTT CAGCGCTGGACCGCGGGACGAGGACAACGATTATATTGTGGATCACACCA TCATCATGTACCTGGTCAATCCCGATGGCGAGTTTGTCGATTACTACGGC CAAAATCGGGACAAGGACCAGTGTGTGGCATCCATTTTGGTGAACATAGC CAAGTGGAATTCAATGAACAAAAAGGGATGGTTCAGCTAGGCTGGCTAAG CTAGGCAAATGTTGTTTCGTTGTATTTACTTAATGTATGGCATAAAATAT GGTTTTTACTTGATGTATATCAAGTTTTAAATCCAAATTTTCGTTTATAT TGGCTATACCTTAAGTTCTAGATTGTAAAAATTTCTGGTTGTTCAAAATA AACTTGATTAACGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8885-RA | 1042 | CG8885-RA | 78..1042 | 1..965 | 4825 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 4966932..4967468 | 429..965 | 100 | <- | Minus |
chr2L | 4967532..4967959 | 1..428 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8885-RA | 1..756 | 35..790 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Scox-RA | 1..756 | 35..790 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Scox-RA | 1..756 | 35..790 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8885-RA | 1..756 | 35..790 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Scox-RA | 1..756 | 35..790 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8885-RA | 78..1042 | 1..965 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Scox-RA | 78..1042 | 1..965 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Scox-RA | 77..1041 | 1..965 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8885-RA | 78..1042 | 1..965 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Scox-RA | 77..1041 | 1..965 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4967832..4968368 | 429..965 | 100 | <- | Minus |
2L | 4968432..4968859 | 1..428 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4967832..4968368 | 429..965 | 100 | <- | Minus |
2L | 4968432..4968859 | 1..428 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4967832..4968368 | 429..965 | 100 | <- | Minus |
2L | 4968432..4968859 | 1..428 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 4967832..4968368 | 429..965 | 100 | <- | Minus |
arm_2L | 4968432..4968859 | 1..428 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4967832..4968368 | 429..965 | 100 | <- | Minus |
2L | 4968432..4968859 | 1..428 | 100 | Minus |
Translation from 34 to 789
> AT19154.hyp MSRSLQRLVGSCRRWAQQPAIRHYAAPADSTKGKGPISWRSLAVIGALGA GGVGFMLYVKSEKDEARMKERQRQLGKAAIGGSWELVDSQGAVRKSEDFL GKWLLIYFGFTHCPDICPDELEKMAAVVDEVEKSPQTPAVQPIFITVDPE RDSKEVVAKYVKEFSPKLLGLTGTVEQIRKVCKAFRVYFSAGPRDEDNDY IVDHTIIMYLVNPDGEFVDYYGQNRDKDQCVASILVNIAKWNSMNKKGWF S*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Scox-PA | 251 | CG8885-PA | 1..251 | 1..251 | 1326 | 100 | Plus |
Translation from 34 to 789
> AT19154.pep MSRSLQRLVGSCRRWAQQPAIRHYAAPADSTKGKGPISWRSLAVIGALGA GGVGFMLYVKSEKDEARMKERQRQLGKAAIGGSWELVDSQGAVRKSEDFL GKWLLIYFGFTHCPDICPDELEKMAAVVDEVEKSPQTPAVQPIFITVDPE RDSKEVVAKYVKEFSPKLLGLTGTVEQIRKVCKAFRVYFSAGPRDEDNDY IVDHTIIMYLVNPDGEFVDYYGQNRDKDQCVASILVNIAKWNSMNKKGWF S*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23635-PA | 251 | GF23635-PA | 1..251 | 1..251 | 1270 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24334-PA | 251 | GG24334-PA | 1..251 | 1..251 | 1325 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10243-PA | 262 | GH10243-PA | 1..262 | 1..251 | 1178 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Scox-PA | 251 | CG8885-PA | 1..251 | 1..251 | 1326 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15364-PA | 250 | GI15364-PA | 1..250 | 1..251 | 1171 | 86.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26535-PA | 254 | GL26535-PA | 1..254 | 1..251 | 1134 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21389-PA | 254 | GA21389-PA | 1..254 | 1..251 | 1134 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18054-PA | 251 | GM18054-PA | 1..251 | 1..251 | 1343 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22674-PA | 251 | GD22674-PA | 1..251 | 1..251 | 1334 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17274-PA | 255 | GJ17274-PA | 1..255 | 1..251 | 1134 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24460-PA | 256 | GK24460-PA | 1..256 | 1..251 | 1184 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18713-PA | 251 | GE18713-PA | 1..251 | 1..251 | 1315 | 98 | Plus |