BDGP Sequence Production Resources |
Search the DGRC for AT19250
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 192 |
Well: | 50 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG15435-RA |
Protein status: | AT19250.pep: gold |
Preliminary Size: | 1669 |
Sequenced Size: | 1871 |
Gene | Date | Evidence |
---|---|---|
CG15435 | 2002-01-01 | Sim4 clustering to Release 2 |
CG15435 | 2002-03-28 | Blastp of sequenced clone |
CG15435 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15435 | 2008-04-29 | Release 5.5 accounting |
CG15435 | 2008-08-15 | Release 5.9 accounting |
CG15435 | 2008-12-18 | 5.12 accounting |
1871 bp (1871 high quality bases) assembled on 2002-03-28
GenBank Submission: AY094657
> AT19250.complete AGCTAACTGGACATCACTGCCGCAAGTGGGTGGACTGTTGAGTTTTGAAC CTTCAGTGGTAGGGCAACACTCGCCGGAGTGTTGAAAATTGTCATTGTTT ATTTTTTCCGGCATAAGCATTAAGTTTAAGGTTTGCCATAAGTATGACGT CGTGGGGCAATATCTGCCGCATCTGCAGCAGCCCCGCAGACTACGAGATA TTCGCCAAGATTCCCACGTATTTGCACGGCTCCACAAACGAGTTTCTCAA CTGGCAAAAGCCCATAAACGTTCTGCTGGAGGAGACGACGGGCCTGAAAA ACTCCACGGACGACGGACTGCCACGCAACATATGTGCGCCGTGCATCTCC TATCTCAAGCATGCCGTCACATTCCGGGAACAGTGCATCAAGAACGCGCT GAGTCTCAAGCTGGCGGAGCTCTACCAGCAGAAGAGGGTCAACGTTTCGG ATGCGAACAAGATGGACAAGGAGAGCGCCCTCTTCACGGCGGAGGATCTG AATTATGTGGAGCAGAGGCCAGTGCATAATCTTCTGCTAAACAACAGCGC CAACAAACTGGAGTCATCCAAGGACAAGGTACACAAGCGACTGCTCAATC AGACGACTACCCAGCTAGACGGCAATGCTGAGCAGAAGATCCAGTACTTA AACGTGCTGTTCAACAAGCAGCAGCCTCACAACAGCATGCCCAGGCAACC GCGGGATGGCGAACTGCCATCGAGCAGTGGCCAAAATGACGACGAAGATG ACGACTATGCGGTGGCCAGTTCCAGCGACGACAACGAGGAGGCGGCCCTG CTGCGCAAGCACAAGAACTGCTATAACTACACCGAGACCAACTTCGAGGA GGACGATCCCATGGAGCAGGATCAGCTGCAGCTGCGCGACATCAAAGTGA ACATACCGGAGCCCATGTGGAAGGAGCGCAAGTGTCCGGCATGCTCCAAA CGCTTCATGTTCGAGGACTCGCATCAGTCGCATCTGGACAACTGCGTCGA ATACCAGTTCGTCACGTTTGTTACCGAGGTGACCAAGTTGCTCGAGATTA GGCGACAGAAAATGGTCTCGCCGCACGAGTTCATCCGCCGCATGATATTC GCTCTGCACAAAACTTGCGCCTGGCTGCAGGAACATTCCATAGACTCGCT TCTGGCCGAGAAGCTCAATCAGGTGAAGGTGTCCAACGGTGAGAAGATAG CTGAGCCGCCAATTCCCATAGATATACCCGATCCCCGGCCGGTGCAGGAA CCATCTCTATTCGACTGTGCCAGCGGAACGACGACTCCGATCACGGAGGA GAACAACGTGCTGTACGCCATTGAGCGCTCTGAAAGTTGCCATTCCCAGG GCACGCCGACGGTGAAAAAACCCATTCCCATTCGCGGAAAGGCGGCGCTG GGAATCGGGCTGGACAAGCACAGGGAGAGAGCCACGTTCCTCGAGAAGCT GCAACGGGCCGCTGTCTCTCCTGGCACAGTTTCGCAGGGTCCAGCGCCCG TTTTCTCAGCCCGCTGCGGGCAGTGCAATTTAGAATTTGACTCAGTCTCC GAACTGGAGGTGCACAACCACAATGCCCACAGGGGCAATGAACTGAACGC CGACGACGAAGCCAAAAGGCGTCAAATAATCGCCCTCTTCGAGGATGATA TTTAGGTTTTACAAAGTCCTGTTTTTCATGCCGGTGGCTCAATCAAACTA GTAATCATGTTGACCACTTTGCATCTGTGTTTTTGTCGTATTGTATTTAT TTATTATTTATTTATTTTATTCTGTTTCCATTAGTGATTTAGTTTTGCTT AGCGGCAATCCATGTTCATTTACAATACATTCTCGAGTACTCAAAAAAAA AAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
297 | 6995 | 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). | 5050..5140 | 1817..1728 | 119 | 63.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 4458970..4459268 | 1..299 | 100 | -> | Plus |
chr2L | 4459339..4460881 | 300..1842 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15435-RA | 1..1512 | 144..1655 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15435-RA | 1..1512 | 144..1655 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15435-RA | 1..1512 | 144..1655 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15435-RA | 1..1512 | 144..1655 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15435-RA | 1..1512 | 144..1655 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15435-RA | 1..1842 | 1..1842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15435-RA | 1..1842 | 1..1842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15435-RA | 1..1807 | 36..1842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15435-RA | 1..1842 | 1..1842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15435-RB | 107..1948 | 1..1842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4459835..4460133 | 1..299 | 100 | -> | Plus |
2L | 4460204..4461746 | 300..1842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4459835..4460133 | 1..299 | 100 | -> | Plus |
2L | 4460204..4461746 | 300..1842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4459835..4460133 | 1..299 | 100 | -> | Plus |
2L | 4460204..4461746 | 300..1842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 4459835..4460133 | 1..299 | 100 | -> | Plus |
arm_2L | 4460204..4461746 | 300..1842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4459835..4460133 | 1..299 | 100 | -> | Plus |
2L | 4460204..4461746 | 300..1842 | 100 | Plus |
Translation from 143 to 1654
> AT19250.pep MTSWGNICRICSSPADYEIFAKIPTYLHGSTNEFLNWQKPINVLLEETTG LKNSTDDGLPRNICAPCISYLKHAVTFREQCIKNALSLKLAELYQQKRVN VSDANKMDKESALFTAEDLNYVEQRPVHNLLLNNSANKLESSKDKVHKRL LNQTTTQLDGNAEQKIQYLNVLFNKQQPHNSMPRQPRDGELPSSSGQNDD EDDDYAVASSSDDNEEAALLRKHKNCYNYTETNFEEDDPMEQDQLQLRDI KVNIPEPMWKERKCPACSKRFMFEDSHQSHLDNCVEYQFVTFVTEVTKLL EIRRQKMVSPHEFIRRMIFALHKTCAWLQEHSIDSLLAEKLNQVKVSNGE KIAEPPIPIDIPDPRPVQEPSLFDCASGTTTPITEENNVLYAIERSESCH SQGTPTVKKPIPIRGKAALGIGLDKHRERATFLEKLQRAAVSPGTVSQGP APVFSARCGQCNLEFDSVSELEVHNHNAHRGNELNADDEAKRRQIIALFE DDI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21255-PA | 487 | GF21255-PA | 1..487 | 1..503 | 1909 | 73.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25007-PA | 502 | GG25007-PA | 1..502 | 1..503 | 2487 | 91.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13745-PA | 540 | GH13745-PA | 1..540 | 1..503 | 1679 | 64.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15435-PB | 503 | CG15435-PB | 1..503 | 1..503 | 2658 | 100 | Plus |
CG15435-PA | 503 | CG15435-PA | 1..503 | 1..503 | 2658 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17888-PA | 525 | GI17888-PA | 1..525 | 1..503 | 1635 | 65.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15215-PA | 576 | GL15215-PA | 1..576 | 1..503 | 1881 | 65.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13725-PA | 575 | GA13725-PA | 1..575 | 1..503 | 1883 | 65.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18476-PA | 503 | GM18476-PA | 1..503 | 1..503 | 2643 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23290-PA | 503 | GD23290-PA | 1..503 | 1..503 | 2656 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17390-PA | 528 | GJ17390-PA | 1..528 | 1..503 | 1722 | 67.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23750-PA | 518 | GK23750-PA | 1..518 | 1..503 | 1537 | 62.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18293-PA | 502 | GE18293-PA | 1..502 | 1..503 | 2500 | 92.2 | Plus |
Translation from 143 to 1654
> AT19250.hyp MTSWGNICRICSSPADYEIFAKIPTYLHGSTNEFLNWQKPINVLLEETTG LKNSTDDGLPRNICAPCISYLKHAVTFREQCIKNALSLKLAELYQQKRVN VSDANKMDKESALFTAEDLNYVEQRPVHNLLLNNSANKLESSKDKVHKRL LNQTTTQLDGNAEQKIQYLNVLFNKQQPHNSMPRQPRDGELPSSSGQNDD EDDDYAVASSSDDNEEAALLRKHKNCYNYTETNFEEDDPMEQDQLQLRDI KVNIPEPMWKERKCPACSKRFMFEDSHQSHLDNCVEYQFVTFVTEVTKLL EIRRQKMVSPHEFIRRMIFALHKTCAWLQEHSIDSLLAEKLNQVKVSNGE KIAEPPIPIDIPDPRPVQEPSLFDCASGTTTPITEENNVLYAIERSESCH SQGTPTVKKPIPIRGKAALGIGLDKHRERATFLEKLQRAAVSPGTVSQGP APVFSARCGQCNLEFDSVSELEVHNHNAHRGNELNADDEAKRRQIIALFE DDI*