BDGP Sequence Production Resources |
Search the DGRC for AT19426
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 194 |
Well: | 26 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG5458-RA |
Protein status: | AT19426.pep: gold |
Preliminary Size: | 1035 |
Sequenced Size: | 1317 |
Gene | Date | Evidence |
---|---|---|
CG5458 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5458 | 2002-02-22 | Blastp of sequenced clone |
CG5458 | 2008-04-29 | Release 5.5 accounting |
CG5458 | 2008-08-15 | Release 5.9 accounting |
CG5458 | 2008-12-18 | 5.12 accounting |
1317 bp (1317 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089373
> AT19426.complete GCTAAGTTAACTATACAAACAGAATACATTTATTTAATGCCTACACAAAA TATTTCCCGAACGTAATTCGTAAGTAAAAATCTGTACTTCACTCGGCAAT AAAAAGAACCGAAAGGAGTTAGTTAACTCAAAATCATCACCATGGCCATG ACCGAAATGTCCGAGGAGGATCTGTCGGCGCCCGAGGAAGAGGAGGATTT GGGACCCAATATAGGCCTCTACATAGGCGGTCGAAATGCTGCCGGACAGA GACAAGGTAGAGGTTGGGCCATCCTGCCCAACGGAGATCAGTATGATGGG AACTACAGGAAGGGTCGCCGTCACGGCATCGGGGTGTACGTGTTCAAGGA TGGTTCACGATACTACGGACAGTATCGCTGCGGGAAGCGTTGTGGGCGCG GCATCTTCATCTATCCGGACGGATCCGTGTACGAGGGCAACTGGCGAAAG AACTTGAAGCACGGCAAGGGCCGGTACAAGTATGTGAATGGGGACAACTA TTCGGGTGACTGGTTCAAGGGACAACGTCATGGGGTGGGCATCTATCACT TTAACAGCGGAAAGGATGGCTGCTGCCTGTCCGTCAGAATGAAGGCCACC TGGAACAGCAACATGCGAACGGGTCCCTTCGAGCTGTATATCGGCAATGA GGACAAGTGCACAATACTTCACGGAATTTGGGATAACCTGTACCCGAGTG GACCGGCCGTGTTTAGCTTCAACAATCGATACCTTCTGCTGGGCTATTTC CTGCCCGCCAGTTACAACATGAAGGCGATCAGCAACGAAGACGAGATGGA GGACGCCGAGGAGCGCTTGGAGGACGAGATGGGTGAAGCGGAGCCAATGG AACCAACACTATGGTTCGCCCAGGAGATGGCCGTGTATGACTTTTCGCTG CTGCCGCAGGAGCCAGTGCCTCTGGCCATTTCCGATTCCGAGCTGTCCGT CTGCTCGCTCTCCACTGAGCCGAGCATGCGCAGCGAGGAGAAGATCAGTT GGTATGGAGAGGGTGAAGAGGCCGAGGGCGAGGAGGGCGGCGAGATGGAG TGCTTCCCATGCGAGTGCGATCTCACCGATGTCAGCGAGGTGGAGACGGA GAGCGAGGTGTGCAAAATCGACGCCAATCCATGCTGCATTGAGATCCTCA AGCAACCAGAGTGTCCAGATCCTTAGGAATGTAGCTGCGCTATTCCACAT GCATTTGTTATTGTTATTTTATGTTGCCTGCAAATGAAAGAATATATCAG TATATCTGAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cr1a | 4470 | Cr1a DMCR1A 4470bp | 1527..1604 | 1254..1175 | 116 | 62.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 13182131..13182346 | 1..216 | 100 | -> | Plus |
chr2L | 13182511..13183558 | 217..1264 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5458-RA | 1..1035 | 142..1176 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5458-RA | 1..1035 | 142..1176 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5458-RA | 1..1035 | 142..1176 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5458-RA | 1..1035 | 142..1176 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5458-RA | 1..1035 | 142..1176 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5458-RA | 1..1262 | 1..1264 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5458-RA | 1..1262 | 1..1264 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5458-RA | 1..1262 | 1..1264 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5458-RA | 1..1262 | 1..1264 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5458-RA | 1..1262 | 1..1264 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13183450..13183663 | 1..216 | 99 | -> | Plus |
2L | 13183828..13184875 | 217..1264 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13183450..13183663 | 1..216 | 99 | -> | Plus |
2L | 13183828..13184875 | 217..1264 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13183450..13183663 | 1..216 | 99 | -> | Plus |
2L | 13183828..13184875 | 217..1264 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 13183450..13183663 | 1..216 | 99 | -> | Plus |
arm_2L | 13183828..13184875 | 217..1264 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13183450..13183663 | 1..216 | 99 | -> | Plus |
2L | 13183828..13184875 | 217..1264 | 100 | Plus |
Translation from 141 to 1175
> AT19426.hyp MAMTEMSEEDLSAPEEEEDLGPNIGLYIGGRNAAGQRQGRGWAILPNGDQ YDGNYRKGRRHGIGVYVFKDGSRYYGQYRCGKRCGRGIFIYPDGSVYEGN WRKNLKHGKGRYKYVNGDNYSGDWFKGQRHGVGIYHFNSGKDGCCLSVRM KATWNSNMRTGPFELYIGNEDKCTILHGIWDNLYPSGPAVFSFNNRYLLL GYFLPASYNMKAISNEDEMEDAEERLEDEMGEAEPMEPTLWFAQEMAVYD FSLLPQEPVPLAISDSELSVCSLSTEPSMRSEEKISWYGEGEEAEGEEGG EMECFPCECDLTDVSEVETESEVCKIDANPCCIEILKQPECPDP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5458-PA | 344 | CG5458-PA | 1..344 | 1..344 | 1905 | 100 | Plus |
CG30429-PA | 305 | CG30429-PA | 77..200 | 36..160 | 183 | 32.1 | Plus |
CG14490-PA | 197 | CG14490-PA | 24..171 | 30..180 | 182 | 32.1 | Plus |
CG30429-PA | 305 | CG30429-PA | 69..162 | 51..140 | 174 | 36.2 | Plus |
CG14490-PA | 197 | CG14490-PA | 42..164 | 25..141 | 170 | 34.1 | Plus |
rtp-PA | 198 | CG10233-PA | 47..157 | 33..143 | 159 | 33 | Plus |
CG30429-PA | 305 | CG30429-PA | 89..193 | 21..124 | 156 | 31.4 | Plus |
rtp-PA | 198 | CG10233-PA | 64..147 | 27..110 | 155 | 39.3 | Plus |
Translation from 141 to 1175
> AT19426.pep MAMTEMSEEDLSAPEEEEDLGPNIGLYIGGRNAAGQRQGRGWAILPNGDQ YDGNYRKGRRHGIGVYVFKDGSRYYGQYRCGKRCGRGIFIYPDGSVYEGN WRKNLKHGKGRYKYVNGDNYSGDWFKGQRHGVGIYHFNSGKDGCCLSVRM KATWNSNMRTGPFELYIGNEDKCTILHGIWDNLYPSGPAVFSFNNRYLLL GYFLPASYNMKAISNEDEMEDAEERLEDEMGEAEPMEPTLWFAQEMAVYD FSLLPQEPVPLAISDSELSVCSLSTEPSMRSEEKISWYGEGEEAEGEEGG EMECFPCECDLTDVSEVETESEVCKIDANPCCIEILKQPECPDP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14224-PA | 346 | GF14224-PA | 1..346 | 1..344 | 1455 | 82.8 | Plus |
Dana\GF11503-PA | 305 | GF11503-PA | 63..204 | 22..164 | 151 | 30.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23819-PA | 344 | GG23819-PA | 1..344 | 1..344 | 1691 | 95.6 | Plus |
Dere\GG23038-PA | 305 | GG23038-PA | 77..200 | 36..160 | 149 | 32.1 | Plus |
Dere\GG21832-PA | 189 | GG21832-PA | 41..173 | 47..182 | 144 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11395-PA | 341 | GH11395-PA | 1..340 | 1..343 | 1249 | 71.3 | Plus |
Dgri\GH22662-PA | 300 | GH22662-PA | 48..187 | 7..141 | 162 | 33.6 | Plus |
Dgri\GH22033-PA | 201 | GH22033-PA | 23..181 | 25..158 | 145 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5458-PA | 344 | CG5458-PA | 1..344 | 1..344 | 1905 | 100 | Plus |
CG30429-PA | 305 | CG30429-PA | 77..200 | 36..160 | 183 | 32.1 | Plus |
CG14490-PA | 197 | CG14490-PA | 24..171 | 30..180 | 182 | 32.1 | Plus |
CG30429-PA | 305 | CG30429-PA | 69..162 | 51..140 | 174 | 36.2 | Plus |
CG14490-PA | 197 | CG14490-PA | 42..164 | 25..141 | 170 | 34.1 | Plus |
rtp-PA | 198 | CG10233-PA | 47..157 | 33..143 | 159 | 33 | Plus |
CG30429-PA | 305 | CG30429-PA | 89..193 | 21..124 | 156 | 31.4 | Plus |
rtp-PA | 198 | CG10233-PA | 64..147 | 27..110 | 155 | 39.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18099-PA | 348 | GI18099-PA | 1..348 | 1..344 | 1311 | 71.6 | Plus |
Dmoj\GI19121-PA | 200 | GI19121-PA | 44..179 | 25..158 | 185 | 37.4 | Plus |
Dmoj\GI21175-PA | 295 | GI21175-PA | 48..187 | 7..141 | 170 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24745-PA | 343 | GL24745-PA | 1..343 | 1..344 | 1374 | 79.2 | Plus |
Dper\GL17232-PA | 186 | GL17232-PA | 75..160 | 51..136 | 146 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18894-PA | 343 | GA18894-PA | 1..343 | 1..344 | 1376 | 79.2 | Plus |
Dpse\GA13025-PA | 186 | GA13025-PA | 75..160 | 51..136 | 145 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10213-PA | 344 | GM10213-PA | 1..344 | 1..344 | 1820 | 99.1 | Plus |
Dsec\GM21832-PA | 196 | GM21832-PA | 16..172 | 31..182 | 153 | 31.3 | Plus |
Dsec\GM16708-PA | 305 | GM16708-PA | 77..200 | 36..160 | 151 | 32.8 | Plus |
Dsec\GM11928-PA | 305 | GM11928-PA | 77..200 | 36..160 | 148 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23870-PA | 344 | GD23870-PA | 1..344 | 1..344 | 1809 | 98.3 | Plus |
Dsim\GD11326-PA | 196 | GD11326-PA | 16..163 | 31..141 | 152 | 30.4 | Plus |
Dsim\GD11922-PA | 305 | GD11922-PA | 77..200 | 36..160 | 149 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16897-PA | 346 | GJ16897-PA | 1..346 | 1..344 | 1307 | 72.1 | Plus |
Dvir\GJ21032-PA | 295 | GJ21032-PA | 63..187 | 22..141 | 166 | 36.8 | Plus |
Dvir\GJ22253-PA | 194 | GJ22253-PA | 18..179 | 22..158 | 159 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23959-PA | 342 | GK23959-PA | 1..341 | 1..343 | 1354 | 77.2 | Plus |
Dwil\GK21721-PA | 298 | GK21721-PA | 62..162 | 45..140 | 169 | 40.6 | Plus |
Dwil\GK22235-PA | 195 | GK22235-PA | 77..166 | 51..139 | 151 | 41.1 | Plus |
Dwil\GK22235-PA | 195 | GK22235-PA | 33..137 | 36..134 | 151 | 38.1 | Plus |
Dwil\GK21721-PA | 298 | GK21721-PA | 63..187 | 22..141 | 149 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18622-PA | 344 | GE18622-PA | 1..344 | 1..344 | 1665 | 94.5 | Plus |