BDGP Sequence Production Resources |
Search the DGRC for AT19549
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 195 |
Well: | 49 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG15333-RA |
Protein status: | AT19549.pep: validated full length |
Preliminary Size: | 719 |
Sequenced Size: | 1771 |
Gene | Date | Evidence |
---|---|---|
CG15333 | 2002-01-01 | Sim4 clustering to Release 2 |
CG15333 | 2002-06-10 | Blastp of sequenced clone |
CG15333 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15333 | 2008-04-29 | Release 5.5 accounting |
CG15333 | 2008-08-15 | Release 5.9 accounting |
CG15333 | 2008-12-18 | 5.12 accounting |
1771 bp (1771 high quality bases) assembled on 2002-06-10
GenBank Submission: AY075234
> AT19549.complete TGGATACGGTGCATCGTGATAAAGATCAGGTGGTAATCTTGAAGAAGGCC AATTACTTGCCCTATCTGGTGAACCTGTTCATTCCGAAGTTGTTTTACCC AGAGAAGATTGTGGTGGCCCGCCTATATCTCGATGTCAATAAGCACGATA AGCAGGCAGCCGAAAACTTCGAGGGAACCGAGACCCCATGCTTTGATGTG CCGCCATCCCTGTTCGCGGATAAGGTTCCAATGGACAAGATTGTCTTTCT GCCAACGTCCATGTTGCCCATGGGCTTCGAAGCTGGCGGTGTTTTTGGGC CGGGTATCCTTACGCGTCGTTCCTATCCCATTGACTTGAAGGCCGCGGGT CACAAGGGTCAAACGCCGCCGCTGTTTGTCGGTTTGCGCATGGAAGTCCA ACCGCCGACAAGGGTCGAGAGTCTCCTAAAAAAAGACGGTGAGTCCCAAC CAATTCAGGACACATTGATGAATTGGTTGCATGCCAGCAATGATCTTATA AATGGGGCACAGCCAAAAGGACAAGAGCTTCGTGATGAATTTTCGCTATC GATGGTCTTCAATTTGCCAATACCACCGAGTCCACCATCGCCCTATTCAT ATGGCCGTATCCCGTTGCAGTGCAACATTTATACGCCGGATCTGTCCAAT GTTCTGTTGCTTATGTCGCACCAACGCGATCTTACGGTGGCGATACTGTC CACCGTTAACAATCCGCATGTTCCATCTGTGGCATTCGCCACCATGGGCG ATGATGCGGAGTGCCCCAAGTTCGAGCTGCCCATCGGAGTCTTTCCCATT TGTGAGGGCGTCAATCGACCAATTTTTCTGCCCAAACGTTTCATGCCCAA AGGATTCGAAGCCGGTTGCGTCATCAAGCCGGGAACTCTATCCGAACTGT GGTTCATGGACTACATCGGACGTTTCGGTCCACCACAGCCACAGTATAAT GGTTCCATCACACCACCGCTATTCGTTGGCAAGATTTGTCGCGAAGAGCC GGCCGTCGATATGATAAAGAAAATTCAATTTGAGATCGAAAAGAAAGCCA GCGATGATGCTGAGTCAAAGGCAACGCTAGCAGGTGTCAAACCTAAATTT GATATTTCCATCACCAAGGGCTTTATGGTAATGGAAACGAAGGAGCCGAA GTCACCAAAGGGGGCATACAGTGTGCAAAACTACGACGAGGCCTTTGATG ATGGATGCATTGTGAGGGTGGTTAAGAAACCGGCCACTGCTGAAGAAGCC ACAGAAACTCGAGAAAGGAATGAAATGTGTACAGTGGGCGATCAGTCGCA GGAGTTGGATAAATGCTCAACTGAGGCTGATCAGAAATACCTATCGTGCT TTCATGTTGATAGCGACATTGATAATATTGCCATGGCCATGGCCCGTTTG GGCATCGCCGATATGAGTCTGCACGCCGACGAGGAGGAATTGTGCGGCAT CGATGGTGATAACGCTTTGATTCAGTTGCGTCATGTCCTCGAGGATCGTA ATCAAATACGCTCCCACACTGACCAGTTGATGCAGGATCATATCTTTCGA ATGAATCGCGATCGGATGCTGGCCCTGCGTCAGCCATTTACTTGTTTCGG ATGCGGTATTCATGAAAAAAAACAATAGTCCAAATGTTGGATGCTGTAAC TCAATAAACTTTTAATTCAACTACCAATCGAATGATATTTACAACTGAAA ATGTTTTATTTTGACTGTTTTGTTTAATAAAAAGTTAAATCAAAAAAAAA AAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15333-RA | 1745 | CG15333-RA | 2..1745 | 1..1744 | 8705 | 99.9 | Plus |
CG15332-RA | 2003 | CG15332-RA | 935..1160 | 682..907 | 785 | 89.8 | Plus |
CG15332-RB | 2046 | CG15332-RB | 978..1203 | 682..907 | 785 | 89.8 | Plus |
CG15332-RA | 2003 | CG15332-RA | 361..587 | 108..334 | 475 | 80.6 | Plus |
CG15332-RB | 2046 | CG15332-RB | 404..630 | 108..334 | 475 | 80.6 | Plus |
CG15332-RA | 2003 | CG15332-RA | 1374..1482 | 1112..1220 | 230 | 80.7 | Plus |
CG15332-RB | 2046 | CG15332-RB | 1417..1525 | 1112..1220 | 230 | 80.7 | Plus |
CG15332-RA | 2003 | CG15332-RA | 833..926 | 580..673 | 185 | 79.7 | Plus |
CG15332-RB | 2046 | CG15332-RB | 876..969 | 580..673 | 185 | 79.7 | Plus |
CG15332-RA | 2003 | CG15332-RA | 286..341 | 39..94 | 175 | 87.5 | Plus |
CG15332-RB | 2046 | CG15332-RB | 329..384 | 39..94 | 175 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 7911383..7913123 | 1741..1 | 8705 | 100 | Minus |
chrX | 22417052 | chrX | 7846591..7846918 | 907..580 | 905 | 85.1 | Minus |
chrX | 22417052 | chrX | 7847108..7847465 | 390..39 | 540 | 77.4 | Minus |
chrX | 22417052 | chrX | 7846269..7846377 | 1220..1112 | 230 | 80.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 8019520..8021263 | 1744..1 | 8705 | 99.9 | Minus |
X | 23542271 | X | 7954695..7955022 | 907..580 | 905 | 85.1 | Minus |
X | 23542271 | X | 7955212..7955569 | 390..39 | 540 | 77.4 | Minus |
X | 23542271 | X | 7954373..7954481 | 1220..1112 | 230 | 80.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 8027618..8029361 | 1744..1 | 8705 | 99.9 | Minus |
X | 23527363 | X | 7962793..7963018 | 907..682 | 785 | 89.8 | Minus |
X | 23527363 | X | 7963366..7963592 | 334..108 | 475 | 80.6 | Minus |
X | 23527363 | X | 7962471..7962579 | 1220..1112 | 230 | 80.7 | Minus |
X | 23527363 | X | 7963027..7963120 | 673..580 | 185 | 79.7 | Minus |
X | 23527363 | X | 7963612..7963667 | 94..39 | 175 | 87.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 7911383..7913123 | 1..1741 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15333-RA | 2..1629 | 1..1628 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15333-RA | 2..1629 | 1..1628 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15333-RA | 2..1629 | 1..1628 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15333-RA | 2..1629 | 1..1628 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15333-RA | 2..1629 | 1..1628 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15333-RA | 2..1742 | 1..1741 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15333-RA | 2..1742 | 1..1741 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15333-RA | 83..1823 | 1..1741 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15333-RA | 2..1742 | 1..1741 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15333-RA | 83..1823 | 1..1741 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8019523..8021263 | 1..1741 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8019523..8021263 | 1..1741 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8019523..8021263 | 1..1741 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 7913556..7915296 | 1..1741 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8027621..8029361 | 1..1741 | 99 | Minus |
Translation from 2 to 1627
> AT19549.hyp DTVHRDKDQVVILKKANYLPYLVNLFIPKLFYPEKIVVARLYLDVNKHDK QAAENFEGTETPCFDVPPSLFADKVPMDKIVFLPTSMLPMGFEAGGVFGP GILTRRSYPIDLKAAGHKGQTPPLFVGLRMEVQPPTRVESLLKKDGESQP IQDTLMNWLHASNDLINGAQPKGQELRDEFSLSMVFNLPIPPSPPSPYSY GRIPLQCNIYTPDLSNVLLLMSHQRDLTVAILSTVNNPHVPSVAFATMGD DAECPKFELPIGVFPICEGVNRPIFLPKRFMPKGFEAGCVIKPGTLSELW FMDYIGRFGPPQPQYNGSITPPLFVGKICREEPAVDMIKKIQFEIEKKAS DDAESKATLAGVKPKFDISITKGFMVMETKEPKSPKGAYSVQNYDEAFDD GCIVRVVKKPATAEEATETRERNEMCTVGDQSQELDKCSTEADQKYLSCF HVDSDIDNIAMAMARLGIADMSLHADEEELCGIDGDNALIQLRHVLEDRN QIRSHTDQLMQDHIFRMNRDRMLALRQPFTCFGCGIHEKKQ*
Translation from 230 to 1627
> AT19549.pep MDKIVFLPTSMLPMGFEAGGVFGPGILTRRSYPIDLKAAGHKGQTPPLFV GLRMEVQPPTRVESLLKKDGESQPIQDTLMNWLHASNDLINGAQPKGQEL RDEFSLSMVFNLPIPPSPPSPYSYGRIPLQCNIYTPDLSNVLLLMSHQRD LTVAILSTVNNPHVPSVAFATMGDDAECPKFELPIGVFPICEGVNRPIFL PKRFMPKGFEAGCVIKPGTLSELWFMDYIGRFGPPQPQYNGSITPPLFVG KICREEPAVDMIKKIQFEIEKKASDDAESKATLAGVKPKFDISITKGFMV METKEPKSPKGAYSVQNYDEAFDDGCIVRVVKKPATAEEATETRERNEMC TVGDQSQELDKCSTEADQKYLSCFHVDSDIDNIAMAMARLGIADMSLHAD EEELCGIDGDNALIQLRHVLEDRNQIRSHTDQLMQDHIFRMNRDRMLALR QPFTCFGCGIHEKKQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20992-PA | 587 | GF20992-PA | 106..348 | 1..254 | 525 | 43.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19680-PA | 543 | GG19680-PA | 83..537 | 1..460 | 1336 | 60.7 | Plus |
Dere\GG17593-PA | 554 | GG17593-PA | 97..551 | 1..459 | 1323 | 59.5 | Plus |
Dere\GG17591-PA | 542 | GG17591-PA | 83..532 | 1..456 | 1318 | 60.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15333-PA | 542 | CG15333-PA | 78..542 | 1..465 | 2464 | 100 | Plus |
CG15332-PA | 571 | CG15332-PA | 97..570 | 1..461 | 1167 | 51.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21655-PA | 645 | GI21655-PA | 102..337 | 1..251 | 326 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15244-PA | 499 | GL15244-PA | 114..351 | 1..251 | 347 | 34.9 | Plus |
Dper\GL15244-PA | 499 | GL15244-PA | 56..196 | 134..278 | 153 | 30.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22928-PA | 505 | GA22928-PA | 114..351 | 1..251 | 345 | 34.9 | Plus |
Dpse\GA22928-PA | 505 | GA22928-PA | 56..196 | 134..278 | 152 | 30.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11956-PA | 540 | GM11956-PA | 81..540 | 1..464 | 1913 | 80.7 | Plus |
Dsec\GM11958-PA | 493 | GM11958-PA | 97..453 | 1..357 | 918 | 54.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24576-PA | 540 | GD24576-PA | 81..540 | 1..464 | 1924 | 80.5 | Plus |
Dsim\GD16138-PA | 576 | GD16138-PA | 97..575 | 1..461 | 1148 | 52.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16893-PA | 701 | GJ16893-PA | 264..383 | 130..250 | 243 | 45.5 | Plus |