BDGP Sequence Production Resources |
Search the DGRC for AT19618
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 196 |
Well: | 18 |
Vector: | pOTB7 |
Associated Gene/Transcript | Cct5-RB |
Protein status: | AT19618.pep: gold |
Sequenced Size: | 1773 |
Gene | Date | Evidence |
---|---|---|
Cct5-RB | 2009-06-22 | Replacement based on scoring |
1773 bp assembled on 2009-09-21
GenBank Submission: BT099778.1
> AT19618.complete CAGATTCGTAGGCAAATGCCCTGCGTGCAATTGACGCACATTATGGCCGC CCGCCAGATCGCGTCCACCCTGAAGACCTCTCTGGGTCCCAAGGGTCTGG ACAAGATCATGGTCAGTCCCGACGGCGACGTGACTGTGACCAACGATGGC GCCACCATCATGAAGCTGATGGAGGTTGACCACGAGATTGCCAAGCTGAT GGTGCAGCTGTCGCAGTCACAGGACGACGAGATCGGCGATGGAACCACCG GCGTTGTCGTGCTGGCCGGAGCACTCTTGGAGCAGGCCGAGGGACTGATC GACAGGGGCATTCATCCCATTCGCATCGCCGATGGCTTTGAATTGGCCGC CCAGTGCGCCATCAAGCAGCTGGACGCGATCGCCCAACCCTTCCCCGTGG ACCCGAAGAACAAGGAGCCACTTATCCAGATCGCCATGACCACGCTGGGC AGCAAGATCGTGAACAAGTGCCATCGTCAGATGGCCGAAATGGCTGTGGA TGCTGTGCTGAATGTGGCCGACATTGAGAAGAAGGACGTGAACTTCGAGC TCATCAAGATCGAGACCAAGGTGGGCGGTCGCATGGAGGACTCGATGCTG GTGAAGGGTGTCATCGTTGACAAGACCCTCAGCCATTCGCAGATGCCCAA GGAGCTAAGGAACGTCAAGCTGGCCATTCTCACCTGCCCGTTTGAGCCCC CGAAGCCAAAGACCAAGCATAAGCTCGATGTTACCTCCGCGGAAGACTAC AGGGCGCTGCGCGAGTACGAGCAGGAGAAGTTCACCCAGATGGTCAAGCA GGTGAAGGACGCCGGCGCCACCCTTGCCATCTGCCAGTGGGGCTTCGATG ATGAGGCCAACCACCTGTTGCTTCAGCAGGAGCTGCCCGCCGTGCGCTGG GTTGGCGGTCCGGAGATCGAGCTGATTGCCATCGCCACCGGTGGACGCAT CGTGCCGCGTTTCGAAGAGCTCACGCCTGAGAAACTAGGTGTTGCGGGAC TCGTTCGCGAAATGGCATTCGGAACATCCAAGGACAAGATGCTGGTCATC GAGGAGTGCAAAAACTCCAAGGCTGTGACCATCTTCTTGCGTGGAGGTAA CGCCATGATCATTGCGGAGGCTAAGCGATCGATTCACGATGCCATCTGCG TGGTGCGTTCGCTTGTGAAGGACTCGCGTATTGTTTACGGTGGTGGAGCT GCCGAGATTAGCTGCTCGTTGGCTGTGGCCAAGGAGGCCGACCAACTGTC CACGCTGGAGCAGTACGCCTTCCGCGCCTTCTCCGTGGCCCTGGAGAGCA TTCCGCTGGCTCTGGCGGAGAACAGCGGCCTGCATCCCATCGAGACGTTG TCGGAGCTGAAGGCCAGACAGGTGGCCGAGAAGAAGTCCAGCCTGGGTGT CGACTGCATGCTGTCGGGTGATTCGGACATGAAGAGCCATAACGTGGTGG AGTCGCTGCACTCGAAGAAGCAGCAGATTCTGCTCTCCACGCAGCTCGTC AAGATGATACTCAAGATCGACGACGTGCGCTCCAAGAACGAAGGCGGCAT GTAACGACCGCCCAGCAGCAGCATCATACATCAGATCTAGTTTCAGATTC ACATCCCCACGCTTCGCTATCTCTTCACGAACAACACCCGCGTCAAGCCT CATCTCTATGTACATCTGTATTAATTGTTTAATTTTATTAATCCACAAGT TCTTTGGAAAAGAAGAAAATTACATTAAACAAGGGGCTATCCCTGTTCAA ATACAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 12176935..12177917 | 33..1015 | 4915 | 100 | Plus |
2R | 25260384 | 2R | 12177976..12178716 | 1015..1755 | 3705 | 100 | Plus |
2R | 25260384 | 2R | 12176295..12176327 | 1..33 | 165 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2793..2858 | 1512..1577 | 114 | 63.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 8062311..8062343 | 1..33 | 100 | -> | Plus |
chr2R | 8062952..8063933 | 34..1015 | 100 | -> | Plus |
chr2R | 8063993..8064731 | 1016..1754 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct5-RB | 1..1539 | 16..1554 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct5-RB | 1..1539 | 16..1554 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct5-RB | 1..1539 | 16..1554 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct5-RB | 1..1539 | 16..1554 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct5-RB | 1..1754 | 1..1754 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct5-RB | 1..1754 | 1..1754 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct5-RB | 1..1754 | 1..1754 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct5-RB | 1..1754 | 1..1754 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12175737..12176718 | 34..1015 | 100 | -> | Plus |
2R | 12176778..12177516 | 1016..1754 | 100 | Plus | |
2R | 12175096..12175128 | 1..33 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12175737..12176718 | 34..1015 | 100 | -> | Plus |
2R | 12176778..12177516 | 1016..1754 | 100 | Plus | |
2R | 12175096..12175128 | 1..33 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12175737..12176718 | 34..1015 | 100 | -> | Plus |
2R | 12176778..12177516 | 1016..1754 | 100 | Plus | |
2R | 12175096..12175128 | 1..33 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 8062601..8062633 | 1..33 | 100 | -> | Plus |
arm_2R | 8063242..8064223 | 34..1015 | 100 | -> | Plus |
arm_2R | 8064283..8065021 | 1016..1754 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12176936..12177917 | 34..1015 | 100 | -> | Plus |
2R | 12177977..12178715 | 1016..1754 | 100 | Plus | |
2R | 12176295..12176327 | 1..33 | 100 | -> | Plus |
Translation from 0 to 1553
> AT19618.pep QIRRQMPCVQLTHIMAARQIASTLKTSLGPKGLDKIMVSPDGDVTVTNDG ATIMKLMEVDHEIAKLMVQLSQSQDDEIGDGTTGVVVLAGALLEQAEGLI DRGIHPIRIADGFELAAQCAIKQLDAIAQPFPVDPKNKEPLIQIAMTTLG SKIVNKCHRQMAEMAVDAVLNVADIEKKDVNFELIKIETKVGGRMEDSML VKGVIVDKTLSHSQMPKELRNVKLAILTCPFEPPKPKTKHKLDVTSAEDY RALREYEQEKFTQMVKQVKDAGATLAICQWGFDDEANHLLLQQELPAVRW VGGPEIELIAIATGGRIVPRFEELTPEKLGVAGLVREMAFGTSKDKMLVI EECKNSKAVTIFLRGGNAMIIAEAKRSIHDAICVVRSLVKDSRIVYGGGA AEISCSLAVAKEADQLSTLEQYAFRAFSVALESIPLALAENSGLHPIETL SELKARQVAEKKSSLGVDCMLSGDSDMKSHNVVESLHSKKQQILLSTQLV KMILKIDDVRSKNEGGM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12298-PA | 542 | GF12298-PA | 37..542 | 12..517 | 2619 | 98 | Plus |
Dana\GF20588-PA | 321 | GF20588-PA | 1..321 | 164..517 | 1492 | 83.9 | Plus |
Dana\GF15661-PA | 533 | GF15661-PA | 26..528 | 9..509 | 831 | 38 | Plus |
Dana\GF19192-PA | 533 | GF19192-PA | 22..518 | 10..509 | 687 | 35.6 | Plus |
Dana\GF17067-PA | 544 | GF17067-PA | 23..530 | 9..516 | 637 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20252-PA | 542 | GG20252-PA | 37..542 | 12..517 | 2660 | 99.8 | Plus |
Dere\GG10247-PA | 533 | GG10247-PA | 26..528 | 9..509 | 826 | 38.3 | Plus |
Dere\GG18286-PA | 533 | GG18286-PA | 22..518 | 10..509 | 696 | 35.6 | Plus |
Dere\GG12510-PA | 557 | GG12510-PA | 14..533 | 3..509 | 639 | 32.1 | Plus |
Dere\GG21785-PA | 544 | GG21785-PA | 23..530 | 9..516 | 632 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19719-PA | 541 | GH19719-PA | 37..540 | 12..515 | 2594 | 97.6 | Plus |
Dgri\GH11666-PA | 533 | GH11666-PA | 26..528 | 9..509 | 809 | 37.8 | Plus |
Dgri\GH12396-PA | 533 | GH12396-PA | 22..518 | 10..509 | 693 | 35.8 | Plus |
Dgri\GH18443-PA | 557 | GH18443-PA | 14..533 | 3..509 | 642 | 32.2 | Plus |
Dgri\GH18159-PA | 544 | GH18159-PA | 23..530 | 9..516 | 634 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CCT5-PB | 512 | CG8439-PB | 1..512 | 6..517 | 2564 | 100 | Plus |
CCT5-PA | 542 | CG8439-PA | 37..542 | 12..517 | 2530 | 100 | Plus |
CCT4-PA | 533 | CG5525-PA | 26..528 | 9..509 | 823 | 37.6 | Plus |
CCT2-PA | 535 | CG7033-PA | 24..520 | 10..509 | 710 | 35.2 | Plus |
CCT1-PA | 557 | CG5374-PA | 14..537 | 3..513 | 674 | 32 | Plus |
CCT1-PB | 557 | CG5374-PB | 14..537 | 3..513 | 674 | 32 | Plus |
CCT3-PD | 544 | CG8977-PD | 23..530 | 9..516 | 652 | 31.8 | Plus |
CCT3-PC | 544 | CG8977-PC | 23..530 | 9..516 | 652 | 31.8 | Plus |
CCT3-PB | 544 | CG8977-PB | 23..530 | 9..516 | 652 | 31.8 | Plus |
CCT3-PA | 544 | CG8977-PA | 23..530 | 9..516 | 652 | 31.8 | Plus |
CCT7-PA | 544 | CG8351-PA | 22..525 | 11..516 | 610 | 29 | Plus |
CCT6-PA | 533 | CG8231-PA | 23..523 | 13..509 | 583 | 30.6 | Plus |
CCT8-PA | 546 | CG8258-PA | 32..533 | 13..516 | 530 | 29.5 | Plus |
Hsp60A-PB | 573 | CG12101-PB | 30..443 | 7..405 | 184 | 23.1 | Plus |
Hsp60A-PA | 573 | CG12101-PA | 30..443 | 7..405 | 184 | 23.1 | Plus |
Hsp60C-PB | 576 | CG7235-PB | 34..485 | 7..444 | 184 | 22.1 | Plus |
Hsp60C-PC | 576 | CG7235-PC | 34..485 | 7..444 | 184 | 22.1 | Plus |
Hsp60C-PA | 576 | CG7235-PA | 34..485 | 7..444 | 184 | 22.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20138-PA | 541 | GI20138-PA | 37..540 | 12..515 | 2575 | 96.6 | Plus |
Dmoj\GI17110-PA | 533 | GI17110-PA | 26..528 | 9..509 | 836 | 38.2 | Plus |
Dmoj\GI14726-PA | 514 | GI14726-PA | 3..499 | 10..509 | 686 | 37 | Plus |
Dmoj\GI10788-PA | 557 | GI10788-PA | 14..533 | 3..509 | 641 | 31.9 | Plus |
Dmoj\GI10112-PA | 544 | GI10112-PA | 23..530 | 9..516 | 639 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11023-PA | 542 | GL11023-PA | 37..542 | 12..517 | 2587 | 97 | Plus |
Dper\GL19739-PA | 533 | GL19739-PA | 26..528 | 9..509 | 823 | 37.9 | Plus |
Dper\GL13090-PA | 521 | GL13090-PA | 24..506 | 10..509 | 656 | 34.3 | Plus |
Dper\GL23334-PA | 557 | GL23334-PA | 14..533 | 3..509 | 632 | 31.5 | Plus |
Dper\GL24528-PA | 533 | GL24528-PA | 23..519 | 9..516 | 592 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21078-PA | 542 | GA21078-PA | 37..542 | 12..517 | 2587 | 97 | Plus |
Dpse\GA18950-PA | 533 | GA18950-PA | 26..528 | 9..509 | 822 | 37.9 | Plus |
Dpse\GA20046-PA | 533 | GA20046-PA | 22..518 | 10..509 | 681 | 35.4 | Plus |
Dpse\GA21448-PA | 544 | GA21448-PA | 23..530 | 9..516 | 636 | 31.8 | Plus |
Dpse\GA18830-PA | 557 | GA18830-PA | 14..533 | 3..509 | 632 | 31.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21339-PA | 542 | GM21339-PA | 37..542 | 12..517 | 2657 | 99.6 | Plus |
Dsec\GM26064-PA | 533 | GM26064-PA | 26..528 | 9..509 | 825 | 38.1 | Plus |
Dsec\GM13717-PA | 533 | GM13717-PA | 22..518 | 10..509 | 675 | 34.7 | Plus |
Dsec\GM23644-PA | 557 | GM23644-PA | 14..533 | 3..509 | 641 | 32.1 | Plus |
Dsec\GM15181-PA | 544 | GM15181-PA | 23..530 | 9..516 | 632 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22106-PA | 516 | GD22106-PA | 26..511 | 9..509 | 748 | 35.9 | Plus |
Dsim\T-cp1-PA | 557 | GD18453-PA | 14..533 | 3..509 | 641 | 32.1 | Plus |
Dsim\GD19118-PA | 544 | GD19118-PA | 23..530 | 9..516 | 632 | 31.8 | Plus |
Dsim\GD24772-PA | 449 | GD24772-PA | 1..434 | 70..509 | 544 | 33 | Plus |
Dsim\GD10130-PA | 546 | GD10130-PA | 32..533 | 13..516 | 493 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19908-PA | 541 | GJ19908-PA | 37..540 | 12..515 | 2583 | 97.2 | Plus |
Dvir\GJ16148-PA | 533 | GJ16148-PA | 26..528 | 9..509 | 828 | 37.8 | Plus |
Dvir\GJ19440-PA | 533 | GJ19440-PA | 22..518 | 10..509 | 706 | 36.4 | Plus |
Dvir\GJ14386-PA | 557 | GJ14386-PA | 14..533 | 3..509 | 642 | 31.9 | Plus |
Dvir\GJ23334-PA | 544 | GJ23334-PA | 23..530 | 9..516 | 628 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23011-PA | 542 | GK23011-PA | 37..542 | 12..517 | 2605 | 97.4 | Plus |
Dwil\GK14617-PA | 533 | GK14617-PA | 26..528 | 9..509 | 831 | 37.9 | Plus |
Dwil\GK16400-PA | 533 | GK16400-PA | 22..518 | 10..509 | 680 | 35.8 | Plus |
Dwil\GK14439-PA | 557 | GK14439-PA | 14..533 | 3..509 | 647 | 32.4 | Plus |
Dwil\GK13436-PA | 544 | GK13436-PA | 23..530 | 9..516 | 629 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12411-PA | 542 | GE12411-PA | 37..542 | 12..517 | 2652 | 99.4 | Plus |
Dyak\GE12130-PA | 533 | GE12130-PA | 26..528 | 9..509 | 826 | 38.3 | Plus |
Dyak\GE15818-PA | 533 | GE15818-PA | 22..518 | 10..509 | 695 | 35.6 | Plus |
Dyak\GE24032-PA | 557 | GE24032-PA | 14..533 | 3..509 | 640 | 32.1 | Plus |
Dyak\GE24588-PA | 544 | GE24588-PA | 23..530 | 9..516 | 632 | 31.8 | Plus |
Translation from 0 to 1553
> AT19618.hyp QIRRQMPCVQLTHIMAARQIASTLKTSLGPKGLDKIMVSPDGDVTVTNDG ATIMKLMEVDHEIAKLMVQLSQSQDDEIGDGTTGVVVLAGALLEQAEGLI DRGIHPIRIADGFELAAQCAIKQLDAIAQPFPVDPKNKEPLIQIAMTTLG SKIVNKCHRQMAEMAVDAVLNVADIEKKDVNFELIKIETKVGGRMEDSML VKGVIVDKTLSHSQMPKELRNVKLAILTCPFEPPKPKTKHKLDVTSAEDY RALREYEQEKFTQMVKQVKDAGATLAICQWGFDDEANHLLLQQELPAVRW VGGPEIELIAIATGGRIVPRFEELTPEKLGVAGLVREMAFGTSKDKMLVI EECKNSKAVTIFLRGGNAMIIAEAKRSIHDAICVVRSLVKDSRIVYGGGA AEISCSLAVAKEADQLSTLEQYAFRAFSVALESIPLALAENSGLHPIETL SELKARQVAEKKSSLGVDCMLSGDSDMKSHNVVESLHSKKQQILLSTQLV KMILKIDDVRSKNEGGM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cct5-PB | 512 | CG8439-PB | 1..512 | 6..517 | 2564 | 100 | Plus |
Cct5-PA | 542 | CG8439-PA | 37..542 | 12..517 | 2530 | 100 | Plus |
CG5525-PA | 533 | CG5525-PA | 26..528 | 9..509 | 823 | 37.6 | Plus |
CG7033-PA | 535 | CG7033-PA | 24..520 | 10..509 | 710 | 35.2 | Plus |
T-cp1-PA | 557 | CG5374-PA | 14..537 | 3..513 | 674 | 32 | Plus |