Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
AT19715.complete Sequence
3442 bp assembled on 2008-06-05
GenBank Submission: BT044066.1
> AT19715.complete
CTAAATTTTTGTAAACAAATATTAACACAGCTTGTATATTTGAAAAATGA
GCAGAAGGAAATGGGACGCTTCCGAAGAGGACAGATTCATCGACATCTGG
ATCCACAACTTGCATCTGTTTGAGCCTGGCAAGAAACTGACAGAAACCTA
TGCGGAACTGGAGCCCTATTTTCGAGATGTTGGCGTAGAGATCAATGTTC
AAGGCATAAAGTCGAAAATGGAATCCCTGAAGCGGAAGTATTTCAATTTG
TTACACTCCGACCAGGAAGACCAAGCTATCACCTGGAGGCACTTCGATGC
GATGGCTTTGGTGGTGAGAGCATCTGCCAACGAGGGGAAGGATTCGGAAT
GGAAGGACTATACGCAGCCATCAAAGACGCCTCATAAAACGCGCTCTTCT
GTTTATATGAACAATCCCGCACAACGTATCAAATATGAGACACCATTCAA
AACCGTCTTCGTGGATGAAAGTGCTGTGAACTATTTTGACGATGAGGAAA
TGCCCAACGCCAAAAGAGTTAGGAAAAGATTCGGCAAAACCAGCAATGTC
AGAGTAAAGGCGCGAAGAGTTTGGCAGCCGGCGGAGGAATGCATATTCGT
TGATGTGTGGGAAAAGTTCGCTAGTCACATACAGAGTGATAGGAAAAAAA
TGGATGTCTACAAGGATATGCATAATGAACTGCAGCTGCGTGGTGTTGGC
ATATTACCGGGCGATATCAAATCCAAAATTGAATCACTTATGCGCACGTT
TAGAGCACAGCGAGATTCGGTGGGAGATAAGTCCGAGTGGATTCATTATT
CGAAGATTTTAAAGATCCAGACTCCTATTGATTTCACCAAGCTGGATGTA
TTTTCCGAGCACAGTAGCAGCTACGAAGACGATGCGTCCTGGTTCAAAGA
ATTGGAGCCGAAACCGGATCCCGATCCTATCAGCCATCCACCGAGCTCTA
GCGATTCCGTTGTCAATCAGTTTGACAATAAAACTCAGCCGAGCTCTCCC
GCGTGCAGTGAAGACTGTTTTTGGTCTGATACTGAACCTAGCCACTGCAA
GGTGTCTATTGAAGTGTTGGACCAAGATGAATCGACAAAGCCGTTCGAAT
CTCCCTCCATTGAAAAGCATAAGGCTGCTGAAGAATTTAGTCAATTTGTA
ACAAAAGAGCTAGCCGTCTTGAATGATGATTTGCTAATCGAAGCAAAACG
CCAAATATACAATATCATATGTGTCTTGCAGAAGAAACAGAATGAAGTAA
ATAAAAAAGCATAGTGACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAACCGGAATCAAGGGGTCTTCAAGTTTGTGGGTCTGACTGTAA
ACGATGAATGCAAGCTTGTGGTCCACCATGATGATCTACTTCGATTGCCC
AAGAGTATTCCCGCCGAAAGTATGAATGACTTGAAAACCAGGTGTCGTGC
GATTGTAGATCAGGGGGTTTTGTTAATCTACGACCATATACCAAGAATTC
AGAGGGCTAAAAATGATCTCGAGGCTAGTGAAAAGCGTGAGGAAACTCAA
AAAAAGTTGTCTAACCTAGTGGAAGAAAAAATGAATTTAATCGTCGAGGA
GATCGAACAGTTGTGCGGTGCATGCTCCAAACAAGAGTCACCCAACAAAA
GTCTCTATCGCGAGATGGCCGAGTTGCGTTCCCAGAAACAGGCCATGGAG
GTTCGTTATTTTGACGCCCAGAAGGAGCACACTGAACAGATGAACCAGTT
GCGGATCGAGCTCGATGCCAAGCTGAAACAGGAGCTGGCCAGTCGAGATC
AGATCATTGTAGAGCTGAGAAAGAGCCTGCGGCGAAGCGAGGATATGCTC
AGTGAGCAGTCCATTCGATTGGCCGAGAACAATTCCAAGCTATTGACCGA
GGATTCCACCATCGAGGTACTGCGCTCCGAGGTAGCCAAGCTCAAGACTG
TAAAAGAGCAAATGGTTAAGCGTCTGGAAGAGGCGGACAAAGGTCTGGAG
CGGGCTCGAAATTCCGTCGATAAGAACTTGAAACACATCGATTACCTGGA
GGGCGAACTGAAGGAGGCCCGTGAGCTCATTGTCCATCTGGAACAGCGTC
CAGATGCCATGGACGCGGGAGTTAAAGAAAAGGATTTGATCATTGCCGAT
TTGAAACTGCAGCTGCAAAGTCTCGAGCAGCATAAGAAGGTCATGAACAA
ACAGGTGGCCAATACAATAAAGCAGCATGCCGACTTTGAAGAGCTGGGTG
GAAACTATAAGGAAGCTCTACAGCAGATAAGCGATCTAAGGGAGACCCTA
AGTGTTACCAATGCCAAATTGGAGATGCAATCCAAGCTCGAAGTGCAGCT
GCGCAAGGAAGTGTCCAAGATGCGCGAGCAAATGGTTATCGATCAGAAGT
TGCTGAACGCTCGCAGCGAATTGATCGCAACACTGCAGAAGAATGAGGAG
GATAGCCGCACCAAACTAGACCAAATGTAAACAACAAGCTGAGTTCGAAG
GAGGAGGAGTTCTATAATCTCTACGGGACCCTCACGCACAAACAAAGGGA
AGTGAGGAGGCAGGAGCATATCATCAAGTTGTTAAAGGAGCAGAATTCGC
GGGTATCATTGTTGCGAGCCAATCAGGACGAGCGGAATGCCACGATGGAG
GAGGAAATCAAACATCTCAAAAACGCCCTTTGGCAATATGGGTGAACATT
TTTTTGAAGTTCTGCCGGCTGGCCAAATGGAGAGCATTAGAAGCGGTGGC
CACCCTGTGCGTCTGGACTCTTCCTGCAAGTTTCTGCAAGAGCCCAATCT
GCAAGAGCCCAATCTGCAGGAACCCAATCTGCAGGAGCCCAATCTGCAAG
ACGACACTCTGCAGGAACCCAATCTGCAAGAACCCAATCTGCAAGAGCCC
AATCTGCAGGAACCCAATCTGCAAGACGCCATTCTGCAGGAGCCCAATCT
GCAGGAACCTAATCTGCAAGACGCCACTCTGCAGGAGCCCAATCTGCAAG
ACGCCACTCTGCAGGAGCTCAATCTGCAAGACGCCACTCTGCAGGAGCCC
AATCTGCAAGAGCAGGAGATGTCCCAACCACGTGGTCGCATCTTTGAGCC
ACTGCAGCATCAACTGCTCGACGGCTTAATTCGCCCCGCCATTTAGTGCG
CTTGCGCTATCAACTACAACATCCAAATATTCGTCCTACAGATCCTACGC
GTCCACAAAAAGTCGCAAATTCCCTGCCACCCTCCTCTGCGATTGCGAAG
ACACCAGCGATCCCAAGACCAGCGTTAAACATCCAATTTGAACTACAAGA
ACCCAACCCAAATATCAACCCAACCCAACACATCCCAAAGGAGAACGCTT
AGCATGGAAATTCTTAAGATGAACAAACCAAATTTTTTGTAACCGTTGGC
CAAATGGCATTGTTTTTTGTACCAAAAAAAAAAAAAAAAAAA
AT19715.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:03:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SIP2-RA | 3202 | SIP2-RA | 926..2095 | 1310..2479 | 5835 | 99.9 | Plus |
SIP2.d | 2950 | SIP2.d | 771..1940 | 1310..2479 | 5835 | 99.9 | Plus |
SIP2-RC | 3144 | SIP2-RC | 825..1994 | 1310..2479 | 5835 | 99.9 | Plus |
SIP2-RA | 3202 | SIP2-RA | 2359..3102 | 2680..3423 | 3660 | 99.4 | Plus |
SIP2.d | 2950 | SIP2.d | 2174..2917 | 2680..3423 | 3660 | 99.4 | Plus |
SIP2-RC | 3144 | SIP2-RC | 2350..3093 | 2680..3423 | 3660 | 99.4 | Plus |
SIP2-RA | 3202 | SIP2-RA | 2133..2335 | 2477..2679 | 1015 | 100 | Plus |
SIP2.d | 2950 | SIP2.d | 1948..2150 | 2477..2679 | 1015 | 100 | Plus |
SIP2-RC | 3144 | SIP2-RC | 2032..2234 | 2477..2679 | 1015 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:26:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 8189802..8190545 | 3423..2680 | 3660 | 99.5 | Minus |
chr3R | 27901430 | chr3R | 22769737..22770256 | 752..1271 | 2540 | 99.2 | Plus |
chr2R | 21145070 | chr2R | 8191754..8192134 | 1951..1571 | 1905 | 100 | Minus |
chr2R | 21145070 | chr2R | 8191360..8191689 | 2281..1952 | 1650 | 100 | Minus |
chr3R | 27901430 | chr3R | 22769368..22769684 | 437..753 | 1555 | 99.4 | Plus |
chr2R | 21145070 | chr2R | 8190794..8190996 | 2679..2477 | 1000 | 99.5 | Minus |
chr2R | 21145070 | chr2R | 8191092..8191291 | 2479..2280 | 1000 | 100 | Minus |
chr3R | 27901430 | chr3R | 22768804..22769002 | 48..246 | 995 | 100 | Plus |
chr2R | 21145070 | chr2R | 8192196..8192357 | 1572..1411 | 810 | 100 | Minus |
chr2R | 21145070 | chr2R | 8190164..8190412 | 3031..2783 | 750 | 86.7 | Minus |
chr2R | 21145070 | chr2R | 8190194..8190442 | 3061..2813 | 750 | 86.7 | Minus |
chr3R | 27901430 | chr3R | 22769050..22769197 | 240..387 | 665 | 96.6 | Plus |
chr2R | 21145070 | chr2R | 8190237..8190442 | 3063..2858 | 625 | 86.9 | Minus |
chr2R | 21145070 | chr2R | 8190162..8190367 | 2988..2783 | 625 | 86.9 | Minus |
chr2R | 21145070 | chr2R | 8190164..8190397 | 3001..2783 | 610 | 85 | Minus |
chr2R | 21145070 | chr2R | 8190224..8190442 | 3061..2828 | 610 | 85 | Minus |
chr2R | 21145070 | chr2R | 8192451..8192551 | 1410..1310 | 505 | 100 | Minus |
chr2R | 21145070 | chr2R | 8190164..8190352 | 2971..2783 | 495 | 84.1 | Minus |
chr2R | 21145070 | chr2R | 8190167..8190337 | 2953..2783 | 495 | 86 | Minus |
chr2R | 21145070 | chr2R | 8190254..8190442 | 3061..2873 | 495 | 84.1 | Minus |
chr2R | 21145070 | chr2R | 8190272..8190442 | 3058..2888 | 495 | 86 | Minus |
chr2R | 21145070 | chr2R | 8190162..8190322 | 2943..2783 | 445 | 85.1 | Minus |
chr2R | 21145070 | chr2R | 8190282..8190442 | 3063..2903 | 445 | 85.1 | Minus |
chr2R | 21145070 | chr2R | 8190167..8190293 | 2908..2782 | 410 | 88.2 | Minus |
chr2R | 21145070 | chr2R | 8190317..8190443 | 3058..2932 | 410 | 88.2 | Minus |
chr2R | 21145070 | chr2R | 8190164..8190307 | 2926..2783 | 345 | 82.6 | Minus |
chr2R | 21145070 | chr2R | 8190299..8190442 | 3061..2918 | 345 | 82.6 | Minus |
chr2R | 21145070 | chr2R | 8190164..8190262 | 2881..2783 | 330 | 88.9 | Minus |
chr2R | 21145070 | chr2R | 8190344..8190442 | 3061..2963 | 330 | 88.9 | Minus |
chr3R | 27901430 | chr3R | 22769255..22769308 | 384..437 | 270 | 100 | Plus |
chr2R | 21145070 | chr2R | 8190162..8190277 | 2898..2783 | 250 | 81 | Minus |
chr2R | 21145070 | chr2R | 8190327..8190442 | 3063..2948 | 250 | 81 | Minus |
chr3R | 27901430 | chr3R | 22768572..22768618 | 1..47 | 235 | 100 | Plus |
chr2R | 21145070 | chr2R | 8190164..8190232 | 2851..2783 | 210 | 87 | Minus |
chr2R | 21145070 | chr2R | 8190374..8190442 | 3061..2993 | 210 | 87 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:54:12 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:26:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12302570..12303313 | 3423..2680 | 3660 | 99.5 | Minus |
3R | 32079331 | 3R | 26946699..26947218 | 752..1271 | 2600 | 100 | Plus |
2R | 25286936 | 2R | 12304522..12304902 | 1951..1571 | 1890 | 99.7 | Minus |
2R | 25286936 | 2R | 12304128..12304457 | 2281..1952 | 1650 | 100 | Minus |
3R | 32079331 | 3R | 26946330..26946646 | 437..753 | 1570 | 99.7 | Plus |
2R | 25286936 | 2R | 12303562..12303764 | 2679..2477 | 1015 | 100 | Minus |
2R | 25286936 | 2R | 12303860..12304059 | 2479..2280 | 1000 | 100 | Minus |
3R | 32079331 | 3R | 26945766..26945964 | 48..246 | 995 | 100 | Plus |
2R | 25286936 | 2R | 12304964..12305125 | 1572..1411 | 810 | 100 | Minus |
2R | 25286936 | 2R | 12302962..12303210 | 3061..2813 | 750 | 86.7 | Minus |
2R | 25286936 | 2R | 12302932..12303180 | 3031..2783 | 750 | 86.7 | Minus |
3R | 32079331 | 3R | 26946012..26946159 | 240..387 | 710 | 98.6 | Plus |
2R | 25286936 | 2R | 12302930..12303135 | 2988..2783 | 625 | 86.9 | Minus |
2R | 25286936 | 2R | 12303005..12303210 | 3063..2858 | 625 | 86.9 | Minus |
2R | 25286936 | 2R | 12302932..12303165 | 3001..2783 | 610 | 85 | Minus |
2R | 25286936 | 2R | 12302992..12303210 | 3061..2828 | 610 | 85 | Minus |
2R | 25286936 | 2R | 12305220..12305320 | 1410..1310 | 505 | 100 | Minus |
2R | 25286936 | 2R | 12302932..12303120 | 2971..2783 | 495 | 84.1 | Minus |
2R | 25286936 | 2R | 12302935..12303105 | 2953..2783 | 495 | 86 | Minus |
2R | 25286936 | 2R | 12303022..12303210 | 3061..2873 | 495 | 84.1 | Minus |
2R | 25286936 | 2R | 12303040..12303210 | 3058..2888 | 495 | 86 | Minus |
2R | 25286936 | 2R | 12302930..12303090 | 2943..2783 | 445 | 85.1 | Minus |
2R | 25286936 | 2R | 12303050..12303210 | 3063..2903 | 445 | 85.1 | Minus |
2R | 25286936 | 2R | 12302935..12303061 | 2908..2782 | 410 | 88.2 | Minus |
2R | 25286936 | 2R | 12303085..12303211 | 3058..2932 | 410 | 88.2 | Minus |
2R | 25286936 | 2R | 12302932..12303075 | 2926..2783 | 345 | 82.6 | Minus |
2R | 25286936 | 2R | 12303067..12303210 | 3061..2918 | 345 | 82.6 | Minus |
2R | 25286936 | 2R | 12302932..12303030 | 2881..2783 | 330 | 88.9 | Minus |
2R | 25286936 | 2R | 12303112..12303210 | 3061..2963 | 330 | 88.9 | Minus |
3R | 32079331 | 3R | 26946217..26946270 | 384..437 | 270 | 100 | Plus |
2R | 25286936 | 2R | 12302930..12303045 | 2898..2783 | 250 | 81 | Minus |
2R | 25286936 | 2R | 12303095..12303210 | 3063..2948 | 250 | 81 | Minus |
3R | 32079331 | 3R | 26945534..26945580 | 1..47 | 235 | 100 | Plus |
2R | 25286936 | 2R | 12303142..12303210 | 3061..2993 | 210 | 87 | Minus |
2R | 25286936 | 2R | 12302932..12303000 | 2851..2783 | 210 | 87 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:21:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 12303769..12304512 | 3423..2680 | 3660 | 99.4 | Minus |
3R | 31820162 | 3R | 26687530..26688049 | 752..1271 | 2600 | 100 | Plus |
2R | 25260384 | 2R | 12305721..12306101 | 1951..1571 | 1890 | 99.7 | Minus |
2R | 25260384 | 2R | 12305327..12305656 | 2281..1952 | 1650 | 100 | Minus |
3R | 31820162 | 3R | 26687161..26687477 | 437..753 | 1570 | 99.6 | Plus |
2R | 25260384 | 2R | 12304761..12304963 | 2679..2477 | 1015 | 100 | Minus |
2R | 25260384 | 2R | 12305059..12305258 | 2479..2280 | 1000 | 100 | Minus |
3R | 31820162 | 3R | 26686597..26686795 | 48..246 | 995 | 100 | Plus |
2R | 25260384 | 2R | 12306163..12306324 | 1572..1411 | 810 | 100 | Minus |
3R | 31820162 | 3R | 26686843..26686990 | 240..387 | 710 | 98.6 | Plus |
2R | 25260384 | 2R | 12306419..12306519 | 1410..1310 | 505 | 100 | Minus |
3R | 31820162 | 3R | 26687048..26687101 | 384..437 | 270 | 100 | Plus |
3R | 31820162 | 3R | 26686365..26686411 | 1..47 | 235 | 100 | Plus |
Blast to na_te.dros performed 2019-03-16 21:26:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
accord2 | 7650 | accord2 QBERT 7650bp | 6209..6284 | 1301..1230 | 173 | 72.4 | Minus |
gypsy4 | 6852 | gypsy4 GYPSY4 6852bp | 503..570 | 1236..1303 | 124 | 64.7 | Plus |
AT19715.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:27:27 Download gff for
AT19715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 8189802..8190545 | 2680..3423 | 99 | <- | Minus |
chr2R | 8190794..8190996 | 2477..2679 | 99 | <- | Minus |
chr2R | 8191095..8191289 | 2282..2476 | 100 | <- | Minus |
chr2R | 8191360..8191689 | 1952..2281 | 100 | <- | Minus |
chr2R | 8191754..8192133 | 1572..1951 | 100 | <- | Minus |
chr2R | 8192197..8192357 | 1411..1571 | 100 | <- | Minus |
chr2R | 8192451..8192553 | 1310..1410 | 98 | <- | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:14:33 Download gff for
AT19715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14252-RA | 1..1218 | 47..1264 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:05:01 Download gff for
AT19715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14252-RA | 1..1218 | 47..1264 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:56:03 Download gff for
AT19715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14252-RA | 1..1218 | 47..1264 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:52:18 Download gff for
AT19715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14252-RA | 1..1218 | 47..1264 | 99 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:19:43 Download gff for
AT19715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14252-RA | 1..1218 | 47..1264 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:27:46 Download gff for
AT19715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SIP2-RE | 771..2142 | 1310..2679 | 99 | -> | Plus |
SIP2-RE | 2164..2276 | 2680..2792 | 98 | == | Plus |
SIP2-RE | 2277..2520 | 2823..3063 | 86 | <- | Plus |
SIP2-RE | 2548..2907 | 3064..3423 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:05:01 Download gff for
AT19715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SIP2-RE | 771..2142 | 1310..2679 | 99 | -> | Plus |
SIP2-RE | 2164..2276 | 2680..2792 | 98 | == | Plus |
SIP2-RE | 2277..2520 | 2823..3063 | 86 | <- | Plus |
SIP2-RE | 2548..2907 | 3064..3423 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:56:03 Download gff for
AT19715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SIP2-RE | 771..2884 | 1310..3423 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:52:18 Download gff for
AT19715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SIP2-RE | 2548..2907 | 3064..3423 | 99 | | Plus |
SIP2-RE | 771..2142 | 1310..2679 | 99 | -> | Plus |
SIP2-RE | 2164..2276 | 2680..2792 | 98 | == | Plus |
SIP2-RE | 2277..2520 | 2823..3063 | 86 | <- | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:19:43 Download gff for
AT19715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SIP2-RE | 771..2884 | 1310..3423 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:27:27 Download gff for
AT19715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12304965..12305125 | 1411..1571 | 100 | <- | Minus |
2R | 12305220..12305322 | 1310..1410 | 98 | <- | Minus |
2R | 12304522..12304901 | 1572..1951 | 99 | <- | Minus |
2R | 12302570..12303313 | 2680..3423 | 99 | <- | Minus |
2R | 12303562..12303764 | 2477..2679 | 100 | <- | Minus |
2R | 12303863..12304057 | 2282..2476 | 100 | <- | Minus |
2R | 12304128..12304457 | 1952..2281 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:27:27 Download gff for
AT19715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12304965..12305125 | 1411..1571 | 100 | <- | Minus |
2R | 12305220..12305322 | 1310..1410 | 98 | <- | Minus |
2R | 12304522..12304901 | 1572..1951 | 99 | <- | Minus |
2R | 12302570..12303313 | 2680..3423 | 99 | <- | Minus |
2R | 12303562..12303764 | 2477..2679 | 100 | <- | Minus |
2R | 12303863..12304057 | 2282..2476 | 100 | <- | Minus |
2R | 12304128..12304457 | 1952..2281 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:27:27 Download gff for
AT19715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12304965..12305125 | 1411..1571 | 100 | <- | Minus |
2R | 12305220..12305322 | 1310..1410 | 98 | <- | Minus |
2R | 12304522..12304901 | 1572..1951 | 99 | <- | Minus |
2R | 12302570..12303313 | 2680..3423 | 99 | <- | Minus |
2R | 12303562..12303764 | 2477..2679 | 100 | <- | Minus |
2R | 12303863..12304057 | 2282..2476 | 100 | <- | Minus |
2R | 12304128..12304457 | 1952..2281 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:56:03 Download gff for
AT19715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8191633..8191962 | 1952..2281 | 100 | <- | Minus |
arm_2R | 8190075..8190818 | 2680..3423 | 99 | <- | Minus |
arm_2R | 8191067..8191269 | 2477..2679 | 100 | <- | Minus |
arm_2R | 8191368..8191562 | 2282..2476 | 100 | <- | Minus |
arm_2R | 8192027..8192406 | 1572..1951 | 99 | <- | Minus |
arm_2R | 8192470..8192630 | 1411..1571 | 100 | <- | Minus |
arm_2R | 8192725..8192827 | 1310..1410 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:33:31 Download gff for
AT19715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12306164..12306324 | 1411..1571 | 100 | <- | Minus |
2R | 12306419..12306521 | 1310..1410 | 98 | <- | Minus |
2R | 12303769..12304512 | 2680..3423 | 99 | <- | Minus |
2R | 12304761..12304963 | 2477..2679 | 100 | <- | Minus |
2R | 12305062..12305256 | 2282..2476 | 100 | <- | Minus |
2R | 12305327..12305656 | 1952..2281 | 100 | <- | Minus |
2R | 12305721..12306100 | 1572..1951 | 99 | <- | Minus |
AT19715.pep Sequence
Translation from 46 to 1263
> AT19715.pep
MSRRKWDASEEDRFIDIWIHNLHLFEPGKKLTETYAELEPYFRDVGVEIN
VQGIKSKMESLKRKYFNLLHSDQEDQAITWRHFDAMALVVRASANEGKDS
EWKDYTQPSKTPHKTRSSVYMNNPAQRIKYETPFKTVFVDESAVNYFDDE
EMPNAKRVRKRFGKTSNVRVKARRVWQPAEECIFVDVWEKFASHIQSDRK
KMDVYKDMHNELQLRGVGILPGDIKSKIESLMRTFRAQRDSVGDKSEWIH
YSKILKIQTPIDFTKLDVFSEHSSSYEDDASWFKELEPKPDPDPISHPPS
SSDSVVNQFDNKTQPSSPACSEDCFWSDTEPSHCKVSIEVLDQDESTKPF
ESPSIEKHKAAEEFSQFVTKELAVLNDDLLIEAKRQIYNIICVLQKKQNE
VNKKA*
AT19715.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:54:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG11513-PA | 320 | GG11513-PA | 6..310 | 1..322 | 1406 | 83.2 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:35:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14252-PA | 405 | CG14252-PA | 1..405 | 1..405 | 2146 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:54:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI24437-PA | 342 | GI24437-PA | 57..195 | 173..311 | 180 | 31.7 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:54:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL27231-PA | 428 | GL27231-PA | 1..427 | 58..403 | 369 | 30.9 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:54:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA12861-PB | 499 | GA12861-PB | 16..498 | 2..403 | 480 | 32.9 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:54:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM10353-PA | 808 | GM10353-PA | 6..335 | 1..348 | 1695 | 90.2 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:54:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD21315-PA | 393 | GD21315-PA | 6..392 | 1..405 | 1912 | 89.6 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 17:54:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ10712-PA | 344 | GJ10712-PA | 96..341 | 173..403 | 383 | 38.9 | Plus |
Dvir\GJ10712-PA | 344 | GJ10712-PA | 8..76 | 3..71 | 167 | 49.3 | Plus |
Dvir\GJ10711-PA | 168 | GJ10711-PA | 2..168 | 223..403 | 146 | 28.3 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:54:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE23701-PA | 389 | GE23701-PA | 4..387 | 1..403 | 1745 | 83.6 | Plus |
AT19715.hyp Sequence
Translation from 1310 to 2479
> AT19715.hyp
LRNQGVFKFVGLTVNDECKLVVHHDDLLRLPKSIPAESMNDLKTRCRAIV
DQGVLLIYDHIPRIQRAKNDLEASEKREETQKKLSNLVEEKMNLIVEEIE
QLCGACSKQESPNKSLYREMSELRSQKQAMEVRYFDAQKEHTEQMNQLRI
ELDAKLKQELASRDQIIVELRKSLRRSEDMLSEQSIRLAENNSKLLTEDS
TIEVLRSEVAKLKTVKEQMVKRLEEADKGLERARNSVDKNLKHIDYLEGE
LKEARELIVHLEQRPDAMDAGVKEKDLIIADLKLQLQSLEQHKKVMNKQV
ANTIKQHADFEELGGNYKEALQQISDLRETLSVTNAKLEMQSKLEVQLRK
EVSKMREQMVIDQKLLNARSELIATLQKNEEDSRTKLDQM*
AT19715.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:06:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SIP2-PG | 589 | CG13164-PG | 200..589 | 1..390 | 1921 | 100 | Plus |
SIP2-PE | 589 | CG13164-PE | 200..589 | 1..390 | 1921 | 100 | Plus |
SIP2-PC | 681 | CG13164-PC | 200..589 | 1..390 | 1921 | 100 | Plus |
SIP2-PA | 832 | CG13164-PA | 200..589 | 1..390 | 1921 | 100 | Plus |
Mhc-PL | 1936 | CG17927-PL | 844..1198 | 57..383 | 167 | 20.2 | Plus |