BDGP Sequence Production Resources |
Search the DGRC for AT19932
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 199 |
Well: | 32 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG17717-RB |
Protein status: | AT19932.pep: gold |
Preliminary Size: | 974 |
Sequenced Size: | 1094 |
Gene | Date | Evidence |
---|---|---|
CG17717 | 2002-01-01 | Sim4 clustering to Release 2 |
CG17717 | 2002-01-03 | Blastp of sequenced clone |
CG17717 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17717 | 2008-04-29 | Release 5.5 accounting |
CG17717 | 2008-08-15 | Release 5.9 accounting |
CG17717 | 2008-12-18 | 5.12 accounting |
1094 bp (1094 high quality bases) assembled on 2002-01-03
GenBank Submission: AY075239
> AT19932.complete CTAACGTTCAAGTTGTATGTAATATGTTGCAGAGAAATTCGGTGTAAAAA TTTGTTTTCTCAAAATTTGTTTTGTAACGCTCACAAGTGGACAAACGCCA CCAACCGCCGCCAAGCAGTTGTCAATATCATTGCAAGCAGTGCAGGCGCA CCACACAATAGCCGTTGCTTACCCGCAACAACATCTGTGTACCCGAGCAA TATGTCGCATCATCAACACGTTCTTTCCGAGGCCGCTGCCCTTCGTCTGA TTAACGGTCTGGAGTCAGCCGGCAATGCCACAATGCCACTCGGCGCTCAG CCGCCTCAGTCAGCGGCAGCTGAAGCAATCTGCTCGTCGCAAATCGTAGC ATCGGCACATGGCACGCCCACTGCATCCACGGCAGCACTGGAAATATCCT CAGCACGACAACGGATGCTGCGAAGTCACCTACAGGAGAGCCTCCATTCG GCGAACGAAAGCGGCAACTCGTGCCGCATCTGCCGCTGGAACCGCAACGA CATGGAGATCATCAAATGTCCCTGCAACTGCAAGGGCAGCGTGTGCTTGA AGCGCTGGATCATGCACAGGCGGGATAATCGCTGTGAGATCTGCAATGCG GTCTTTAATATCGCGGAGGAGCGGGCCAGTCTGAAGCAAATGATCCGAAC CTTCTGCTGCGGCCGTTGTTGCGGCCTGATTGTGAAGCATCTGCTATTTA GCGCCTCGCTAATGCCACTAGCCCATATCATCTTGCAGCAGGTGCTGCAG TGCATGGATAATATGAATCAGGGCAGCACCGATCAGTTAACCGTCCAGGA GGTGTTTGTCGCCTCTTGTGCCCTTCTGACCTCCAGTGCACTTTTCTTCC ACTTCTTTGAGTTTGTCACCACACGATTTATGCTCATCCGGAACATTCTC AGCCACTGGTGGATGTTTGGCAGCACCTCCGATTTTGAGCTGGTGGAGAT TGAGGATGATTCCATCGATTTTTTCGATGATTAGCCGATAATATGGACTG ATATAAAAATGATGATAATGGAAGGCAGAGCAGCATTCATGTTTACAGTT AAATAAATTATTTTATTATTTCATAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 6481575..6482117 | 1..543 | 2715 | 100 | Plus |
chrX | 22417052 | chrX | 6482595..6482930 | 739..1074 | 1680 | 100 | Plus |
chrX | 22417052 | chrX | 6482334..6482535 | 543..744 | 1010 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 6482598..6482903 | 742..1047 | 100 | -> | Plus |
chrX | 6481575..6482117 | 1..543 | 100 | -> | Plus |
chrX | 6482335..6482532 | 544..741 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17717-RB | 1..783 | 202..984 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17717-RB | 1..783 | 202..984 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17717-RB | 1..783 | 202..984 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17717-RB | 1..783 | 202..984 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17717-RB | 1..783 | 202..984 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17717-RB | 1..1074 | 1..1074 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17717-RB | 1..1074 | 1..1074 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17717-RB | 1..1074 | 1..1074 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17717-RB | 1..1074 | 1..1074 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17717-RB | 1..1074 | 1..1074 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6589290..6589832 | 1..543 | 99 | -> | Plus |
X | 6590051..6590248 | 544..741 | 100 | -> | Plus |
X | 6590314..6590646 | 742..1074 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6589290..6589832 | 1..543 | 99 | -> | Plus |
X | 6590051..6590248 | 544..741 | 100 | -> | Plus |
X | 6590314..6590646 | 742..1074 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6589290..6589832 | 1..543 | 99 | -> | Plus |
X | 6590051..6590248 | 544..741 | 100 | -> | Plus |
X | 6590314..6590646 | 742..1074 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 6483323..6483865 | 1..543 | 99 | -> | Plus |
arm_X | 6484084..6484281 | 544..741 | 100 | -> | Plus |
arm_X | 6484347..6484679 | 742..1074 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6597388..6597930 | 1..543 | 99 | -> | Plus |
X | 6598149..6598346 | 544..741 | 100 | -> | Plus |
X | 6598412..6598744 | 742..1074 | 99 | Plus |
Translation from 1 to 983
> AT19932.hyp LTFKLYVICCREIRCKNLFSQNLFCNAHKWTNATNRRQAVVNIIASSAGA PHNSRCLPATTSVYPSNMSHHQHVLSEAAALRLINGLESAGNATMPLGAQ PPQSAAAEAICSSQIVASAHGTPTASTAALEISSARQRMLRSHLQESLHS ANESGNSCRICRWNRNDMEIIKCPCNCKGSVCLKRWIMHRRDNRCEICNA VFNIAEERASLKQMIRTFCCGRCCGLIVKHLLFSASLMPLAHIILQQVLQ CMDNMNQGSTDQLTVQEVFVASCALLTSSALFFHFFEFVTTRFMLIRNIL SHWWMFGSTSDFELVEIEDDSIDFFDD*
Translation from 201 to 983
> AT19932.pep MSHHQHVLSEAAALRLINGLESAGNATMPLGAQPPQSAAAEAICSSQIVA SAHGTPTASTAALEISSARQRMLRSHLQESLHSANESGNSCRICRWNRND MEIIKCPCNCKGSVCLKRWIMHRRDNRCEICNAVFNIAEERASLKQMIRT FCCGRCCGLIVKHLLFSASLMPLAHIILQQVLQCMDNMNQGSTDQLTVQE VFVASCALLTSSALFFHFFEFVTTRFMLIRNILSHWWMFGSTSDFELVEI EDDSIDFFDD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22266-PA | 292 | GF22266-PA | 1..292 | 1..258 | 1011 | 69.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19596-PA | 277 | GG19596-PA | 1..277 | 1..260 | 1124 | 79.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12688-PA | 245 | GH12688-PA | 6..245 | 5..258 | 841 | 63.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17717-PB | 260 | CG17717-PB | 1..260 | 1..260 | 1370 | 100 | Plus |
CG17717-PA | 266 | CG17717-PA | 1..266 | 1..260 | 1353 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16362-PA | 302 | GI16362-PA | 116..302 | 78..258 | 854 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14305-PA | 277 | GL14305-PA | 1..252 | 1..245 | 817 | 63.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14623-PA | 265 | GA14623-PA | 1..265 | 1..258 | 854 | 63.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12500-PA | 273 | GM12500-PA | 1..273 | 1..260 | 1254 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16805-PA | 273 | GD16805-PA | 1..273 | 1..260 | 1248 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16731-PA | 158 | GJ16731-PA | 11..158 | 111..255 | 669 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20143-PA | 264 | GK20143-PA | 1..264 | 1..258 | 851 | 67.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16756-PA | 273 | GE16756-PA | 1..273 | 1..260 | 1103 | 82.1 | Plus |