AT19986.complete Sequence
757 bp (757 high quality bases) assembled on 2002-01-03
GenBank Submission: AY089376.1
> AT19986.complete
TTTAGAGATAATCAAAATTAGCTGTTTTCATTTTCGTAAGCATGAACATT
AACCCAATAATCAGATCTATTCTCAGCCGCTTCAGAGGCTGCACCATCAG
AAGTTATCTGGTTGTTCTGCCCGATCAGAGTCGCATAGAAAATCAACTAA
AACTGGAGGATCTGCAAACAGAACGCGGAATCTTGGATCTGCAATCCCAT
GAGCTGGCACTCAAGCAAAAGCGCGTCGAGGCCAATCTAACCGACCTGAC
CCGCTGCATCCGTGGCATGGAGTTCGATGTGAAGGTGAATTCCAATCGCG
AGAGGAAGGAGAGAAAATCTGATCGACGCCCCCCAGCTGATAAGAAATCA
CCCAAAGTCGGTGATTTCAGCGAATAGCAAAATCCCCCCGGGTGCTTCCC
AATCCCAAGGGCATACGAGTGCAGCGTATAAAAACAAGCTATTGCCGGAG
GTCGGCATTCAGATTCACTTGAGATTGCCAACCATGAAGCTGATCGCATT
GTGCTGCCTGCTCCTTTTGGGCCTCCTGGGCTTCCTAGCTGCTCCCGGCG
TCGCCTCGCCATCTCGCCACACTGGACCAGGAAACGGATCGGGATCTGGA
GCTGGGTCCGGAAATCCGTTCAGGTCTCCAAGCTCACAGCAACGACCACT
GTACTACGACGCTCCGATTGGGAAACCATCGAAGACTATGTACGCCTGAC
GTAAAGAATGAAACAATAAAGATTTGAAACGCCTAAACTAAAAAAAAAAA
AAAAAAA
AT19986.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 20:56:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
IM18-RA | 739 | IM18-RA | 1..739 | 1..739 | 3665 | 99.7 | Plus |
CG10332-RA | 739 | CG10332-RA | 1..739 | 1..739 | 3665 | 99.7 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:47:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 19487161..19487726 | 739..174 | 2815 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 19487921..19488020 | 100..1 | 500 | 100 | Minus |
chr2R | 21145070 | chr2R | 19487797..19487869 | 171..99 | 350 | 98.6 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:54:25 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:47:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23600911..23601482 | 742..171 | 2860 | 100 | Minus |
2R | 25286936 | 2R | 23601674..23601773 | 100..1 | 485 | 99 | Minus |
2R | 25286936 | 2R | 23601550..23601622 | 171..99 | 350 | 98.6 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:15:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 23602110..23602681 | 742..171 | 2860 | 100 | Minus |
2R | 25260384 | 2R | 23602873..23602972 | 100..1 | 485 | 99 | Minus |
2R | 25260384 | 2R | 23602749..23602821 | 171..99 | 350 | 98.6 | Minus |
Blast to na_te.dros performed on 2019-03-16 21:47:43 has no hits.
AT19986.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:48:47 Download gff for
AT19986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 19487161..19487729 | 171..739 | 99 | <- | Minus |
chr2R | 19487798..19487867 | 101..170 | 98 | <- | Minus |
chr2R | 19487921..19488020 | 1..100 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:14:50 Download gff for
AT19986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10332-RA | 1..336 | 42..377 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:55:11 Download gff for
AT19986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10332-RA | 1..336 | 42..377 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:02:40 Download gff for
AT19986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10332-RA | 1..336 | 42..377 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:37:44 Download gff for
AT19986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10332-RA | 1..336 | 42..377 | 99 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:31:24 Download gff for
AT19986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10332-RA | 1..336 | 42..377 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-27 15:32:54 Download gff for
AT19986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
IM18-RA | 1..739 | 1..739 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:55:11 Download gff for
AT19986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10332-RA | 1..739 | 1..739 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:02:40 Download gff for
AT19986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10332-RA | 1..739 | 1..739 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:37:44 Download gff for
AT19986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
IM18-RA | 1..739 | 1..739 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:31:24 Download gff for
AT19986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
IM18-RA | 1..739 | 1..739 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:48:47 Download gff for
AT19986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23600914..23601482 | 171..739 | 100 | <- | Minus |
2R | 23601551..23601620 | 101..170 | 98 | <- | Minus |
2R | 23601674..23601773 | 1..100 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:48:47 Download gff for
AT19986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23600914..23601482 | 171..739 | 100 | <- | Minus |
2R | 23601551..23601620 | 101..170 | 98 | <- | Minus |
2R | 23601674..23601773 | 1..100 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:48:47 Download gff for
AT19986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23600914..23601482 | 171..739 | 100 | <- | Minus |
2R | 23601551..23601620 | 101..170 | 98 | <- | Minus |
2R | 23601674..23601773 | 1..100 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:02:40 Download gff for
AT19986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19488437..19489005 | 171..739 | 100 | <- | Minus |
arm_2R | 19489074..19489143 | 101..170 | 98 | <- | Minus |
arm_2R | 19489197..19489296 | 1..100 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:20:36 Download gff for
AT19986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23602131..23602699 | 171..739 | 100 | <- | Minus |
2R | 23602768..23602837 | 101..170 | 98 | <- | Minus |
2R | 23602891..23602990 | 1..100 | 99 | | Minus |
AT19986.hyp Sequence
Translation from 41 to 376
> AT19986.hyp
MDINPIIRSILSRFRGCTIRSYLVVLPDQSRIENQLKLEDLQTERGILDL
QSHELALKQKRVEANLTDLTRCIRGMEFDVKVNSNRERKERKSDRRPPAD
KKSPKVGDFSE*
AT19986.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:07:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10332-PA | 111 | CG10332-PA | 1..111 | 1..111 | 561 | 100 | Plus |
AT19986.pep Sequence
Translation from 483 to 698
> AT19986.pep
MKLIALCCLLLLGLLGFLAAPGVASPSRHTGPGNGSGSGAGSGNPFRSPS
SQQRPLYYDAPIGKPSKTMYA*
AT19986.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:18:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG20014-PA | 71 | GG20014-PA | 19..71 | 19..71 | 212 | 79.2 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:34:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
IM18-PB | 71 | CG33706-PB | 1..71 | 1..71 | 375 | 100 | Plus |
IM18-PA | 71 | CG33706-PA | 1..71 | 1..71 | 375 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:18:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM15526-PA | 69 | GM15526-PA | 1..69 | 1..71 | 188 | 85.9 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:18:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD25031-PA | 69 | GD25031-PA | 1..69 | 1..71 | 188 | 85.9 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:18:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE11551-PA | 66 | GE11551-PA | 1..66 | 1..71 | 129 | 77.5 | Plus |