BDGP Sequence Production Resources |
Search the DGRC for AT19988
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 199 |
Well: | 88 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG14262-RA |
Protein status: | AT19988.pep: gold |
Preliminary Size: | 939 |
Sequenced Size: | 1012 |
Gene | Date | Evidence |
---|---|---|
CG14262 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14262 | 2002-01-03 | Blastp of sequenced clone |
CG14262 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14262 | 2008-04-29 | Release 5.5 accounting |
CG14262 | 2008-08-15 | Release 5.9 accounting |
CG14262 | 2008-12-18 | 5.12 accounting |
1012 bp (1012 high quality bases) assembled on 2002-01-03
GenBank Submission: AY075240
> AT19988.complete GTTTCCCTGGCAGGAATGTCAGACTCTGAGAAGGAGGCCGCCGGCAAAGC CCACCTGGGAAGCAACAATCGGTGGTCCGACCTGGAGGAGGAGGAGGAGG GTGAGGCGAACGACCAGGGAGGGATCCAGAACTTGAGGCCGGAACTCGTT GTGCCCAGAACCACAGCTGCATCGGATGTTGAGGAGAATTTACCATTGGG TTCTCCGAGTGATGGGTCCAAACGCGCTACGAGTAGAAACCGCAGACTGG AATACTTTCGCAGTGGAGCCGATGCCGATTGCCAGGTGCACGTCCTGAGC AACTGCCCCCAATCCGATGAGCCGGCGGTCAGTGTGTGCTACAAGAAGTT TGGCTGCCATCGGATCTTCCTGGCCACCGCCTCCGACAAACTGGAGCAGG ACGTGTACCAGAACAAGGACTGGAACGGCGTACTCCAGATCAATGGGGTT TCGCCCGAGAGCGTGGAGATCTTCCTGGAGTTCATATACACCTTCGAGGT GACCTCGCCGCTGGTCCAGCTGAAGCTGGTGGGGGATATGTTCATCCTGT CCTGCGCGTACAACATGCCGGAGCTCCTTCGCTCCTTTGCTGAGAAACTA AAGGAGCAGGAATTGCCTCTGGATGGCATCTTTCCTGCCTTCGACCTAGC ATTCCGGCATAACATCATCGATGTGGAGCGCGTTTGCATCGAGAAAATCA TAGAGGAAGGCGCATCATTGATCCACGAACCCAGTTTAATGAAACTCCCG GTCTATGCTCTAAACTACGCCATCCAGCACTGGCTGGTGGCGGATGCAGT GCCTCCCGATGAACTCATCACGATTTTAAAGCAGTATCAGGAGATCAATG AGATTACATTCGCCAACACGCAAAAATTCCCGCACTTCACCAAAATTATC AAGTATTTCCCCAATGTTCTTCTGGACGCCGAGGGATTCATCAATCAAAA CTAGAAAACTACTTGGAATTCCCAAAAGCTTCGCGCATAAAACCCAAAAA AAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 23087306..23087607 | 694..995 | 100 | <- | Minus |
chr3R | 23087661..23088353 | 1..693 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14262-RA | 1..939 | 16..954 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14262-RA | 1..939 | 16..954 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14262-RA | 1..939 | 16..954 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14262-RA | 1..939 | 16..954 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14262-RA | 1..939 | 16..954 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14262-RA | 10..1004 | 1..995 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14262-RA | 10..1004 | 1..995 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14262-RA | 10..1004 | 1..995 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14262-RA | 10..1004 | 1..995 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14262-RA | 10..1004 | 1..995 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27264374..27264675 | 694..995 | 100 | <- | Minus |
3R | 27264729..27265421 | 1..693 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27264374..27264675 | 694..995 | 100 | <- | Minus |
3R | 27264729..27265421 | 1..693 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27264374..27264675 | 694..995 | 100 | <- | Minus |
3R | 27264729..27265421 | 1..693 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 23090096..23090397 | 694..995 | 100 | <- | Minus |
arm_3R | 23090451..23091143 | 1..693 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27005205..27005506 | 694..995 | 100 | <- | Minus |
3R | 27005560..27006252 | 1..693 | 99 | Minus |
Translation from 1 to 953
> AT19988.hyp VSLAGMSDSEKEAAGKAHLGSNNRWSDLEEEEEGEANDQGGIQNLRPELV VPRTTAASDVEENLPLGSPSDGSKRATSRNRRLEYFRSGADADCQVHVLS NCPQSDEPAVSVCYKKFGCHRIFLATASDKLEQDVYQNKDWNGVLQINGV SPESVEIFLEFIYTFEVTSPLVQLKLVGDMFILSCAYNMPELLRSFAEKL KEQELPLDGIFPAFDLAFRHNIIDVERVCIEKIIEEGASLIHEPSLMKLP VYALNYAIQHWLVADAVPPDELITILKQYQEINEITFANTQKFPHFTKII KYFPNVLLDAEGFINQN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14262-PA | 312 | CG14262-PA | 1..312 | 6..317 | 1626 | 100 | Plus |
CG14260-PA | 249 | CG14260-PA | 6..237 | 81..314 | 262 | 29.6 | Plus |
CG14260-PB | 166 | CG14260-PB | 6..144 | 81..221 | 178 | 31.5 | Plus |
Translation from 15 to 953
> AT19988.pep MSDSEKEAAGKAHLGSNNRWSDLEEEEEGEANDQGGIQNLRPELVVPRTT AASDVEENLPLGSPSDGSKRATSRNRRLEYFRSGADADCQVHVLSNCPQS DEPAVSVCYKKFGCHRIFLATASDKLEQDVYQNKDWNGVLQINGVSPESV EIFLEFIYTFEVTSPLVQLKLVGDMFILSCAYNMPELLRSFAEKLKEQEL PLDGIFPAFDLAFRHNIIDVERVCIEKIIEEGASLIHEPSLMKLPVYALN YAIQHWLVADAVPPDELITILKQYQEINEITFANTQKFPHFTKIIKYFPN VLLDAEGFINQN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18717-PA | 323 | GF18717-PA | 76..322 | 65..311 | 975 | 69.2 | Plus |
Dana\GF16280-PA | 260 | GF16280-PA | 6..234 | 76..307 | 266 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12123-PA | 319 | GG12123-PA | 1..319 | 1..312 | 1417 | 83.6 | Plus |
Dere\GG11540-PA | 249 | GG11540-PA | 6..237 | 76..309 | 272 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21482-PA | 274 | GH21482-PA | 10..272 | 51..312 | 866 | 61.2 | Plus |
Dgri\GH19505-PA | 312 | GH19505-PA | 6..234 | 76..307 | 304 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14262-PA | 312 | CG14262-PA | 1..312 | 1..312 | 1626 | 100 | Plus |
CG14260-PA | 249 | CG14260-PA | 6..237 | 76..309 | 262 | 29.6 | Plus |
CG14260-PB | 166 | CG14260-PB | 6..144 | 76..216 | 178 | 31.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10513-PA | 298 | GI10513-PA | 58..294 | 72..309 | 815 | 60.5 | Plus |
Dmoj\GI22256-PA | 265 | GI22256-PA | 6..219 | 76..293 | 290 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23048-PA | 297 | GL23048-PA | 4..297 | 18..311 | 759 | 50.5 | Plus |
Dper\GL24485-PA | 400 | GL24485-PA | 6..232 | 76..307 | 255 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12866-PA | 297 | GA12866-PA | 4..297 | 18..311 | 766 | 50.8 | Plus |
Dpse\GA12865-PA | 389 | GA12865-PA | 6..232 | 76..307 | 256 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10115-PA | 318 | GM10115-PA | 1..318 | 1..312 | 1528 | 90.6 | Plus |
Dsec\GM10382-PA | 249 | GM10382-PA | 6..237 | 76..309 | 270 | 30.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15079-PA | 235 | GD15079-PA | 1..214 | 1..208 | 986 | 87.5 | Plus |
Dsim\GD15081-PA | 71 | GD15081-PA | 1..71 | 242..312 | 361 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23194-PA | 312 | GJ23194-PA | 74..311 | 73..311 | 844 | 63.2 | Plus |
Dvir\GJ24047-PA | 340 | GJ24047-PA | 6..236 | 76..309 | 283 | 28.7 | Plus |