BDGP Sequence Production Resources |
Search the DGRC for AT20169
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 201 |
Well: | 69 |
Vector: | pOTB7 |
Associated Gene/Transcript | Ime4-RA |
Protein status: | AT20169.pep: gold |
Preliminary Size: | 1827 |
Sequenced Size: | 1954 |
Gene | Date | Evidence |
---|---|---|
CG5933 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5933 | 2002-04-21 | Blastp of sequenced clone |
CG5933 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5933 | 2008-04-29 | Release 5.5 accounting |
CG5933 | 2008-08-15 | Release 5.9 accounting |
CG5933 | 2008-12-18 | 5.12 accounting |
1954 bp (1954 high quality bases) assembled on 2002-04-21
GenBank Submission: AY113286
> AT20169.complete AAACAATGGCAGATGCGTGGGACATAAAATCACTCAAGACAAAGCGGAAC ACGCTCCGCGAGAAGCTGGAAAAGCGCAAGAAGGAGCGCATTGAGATTCT CTCGGACATTCAGGAGGATCTGACGAATCCCAAAAAGGAACTCGTTGAGG CTGACTTGGAAGTACAGAAGGAGGTGCTGCAGGCCCTCAGTTCCTGCTCC CTGGCCCTGCCCATTGTCTCCACACAGGTGGTGGAAAAGATTGCCGGCAG CAGCCTGGAGATGGTGAACTTTATTCTAGGCAAACTGGCCAACCAGGGTG CAATTGTGATCCGGAACGTGACCATCGGCACCGAGGCCGGCTGCGAAATC ATCTCTGTGCAGCCCAAGGAGCTGAAGGAGATCCTGGAAGACACCAACGA TACGTGTCAGCAAAAGGAGGAGGAGGCCAAGAGAAAGTTGGAAGTCGACG ATGTTGATCAGCCACAGGAGAAGACAATAAAACTGGAGTCCACTGTAGCG CGGAAAGAGTCCACAAGCCTGGATGCTCCGGACGACATTATGATGCTGCT ATCCATGCCTTCCACCCGCGAAAAACAGAGTAAGCAGGTGGGCGAGGAGA TTCTTGAGCTGCTTACTAAGCCTACGGCCAAAGAGCGATCCGTGGCTGAG AAGTTTAAGTCCCACGGCGGAGCGCAGGTCATGGAGTTTTGCTCCCACGG CACAAAAGTCGAGTGCCTGAAGGCTCAACAAGCCACCGCCGAGATGGCGG CCAAAAAGAAACAAGAAAGAAGAGACGAAAAGGAGCTTCGCCCGGATGTT GATGCGGGCGAAAACGTCACCGGTAAGGTACCCAAGACAGAATCGGCAGC CGAGGATGGAGAAATCATTGCGGAGGTTATAAACAATTGCGAAGCCGAGT CGCAGGAATCCACCGATGGCAGCGATACCTGCAGCAGTGAGACAACAGAC AAGTGCACCAAACTGCATTTCAAAAAGATCATCCAGGCTCACACGGACGA ATCTCTGGGGGACTGCAGTTTCCTAAACACCTGCTTCCACATGGCCACCT GCAAGTACGTGCACTATGAGGTGGACACCCTGCCGCATATAAACACAAAC AAGCCCACGGATGTGAAAACCAAATTGAGCCTCAAGCGCAGCGTAGACTC CAGTTGCACGCTCTATCCGCCGCAATGGATTCAATGCGACCTACGCTTCT TGGACATGACGGTCCTGGGAAAGTTCGCTGTGGTGATGGCCGATCCTCCC TGGGATATCCACATGGAATTGCCCTACGGCACAATGTCGGACGATGAAAT GAGAGCACTGGGCGTGCCGGCACTTCAGGATGACGGCTTGATCTTTCTGT GGGTCACTGGACGAGCCATGGAACTTGGCCGCGACTGCCTCAAGTTGTGG GGCTATGAGCGCGTGGACGAACTCATCTGGGTAAAGACCAACCAACTGCA GCGAATTATTCGCACTGGGCGCACTGGTCATTGGCTAAACCACGGCAAGG AGCACTGTTTGGTGGGCATGAAAGGCAATCCCACAAACCTGAACCGCGGA CTCGATTGCGATGTGATCGTTGCGGAGGTGCGGGCCACCTCTCACAAGCC GGATGAGATTTATGGTATTATCGAGCGTCTAAGCCCGGGTACTCGCAAGA TCGAGCTCTTTGGGCGTCCGCACAACATCCAACCGAACTGGATAACCCTG GGAAACCAACTGGATGGCATTCGACTGGTGGATCCGGAGCTAATTACGCA GTTCCAGAAGCGTTATCCAGATGGTAACTGCATGTCGCCAGCTTCTGCCA ATGCGGCGTCGATCAATGGAATACAAAAGTAGGATTAAAATAGTATTTGC TGTATGAATTGAGACCTCGACAAGCCAGAGTTGTGTACAGACTCAATTAT AGTAAGATAAATTATTATTAAAGCTTTTACAAACCGAAAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 19856145..19857642 | 439..1936 | 7460 | 99.9 | Plus |
chr3R | 27901430 | chr3R | 19855782..19856076 | 144..438 | 1475 | 100 | Plus |
chr3R | 27901430 | chr3R | 19855577..19855725 | 1..149 | 730 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 24032760..24034260 | 439..1939 | 7475 | 99.9 | Plus |
3R | 32079331 | 3R | 24032397..24032691 | 144..438 | 1475 | 100 | Plus |
3R | 32079331 | 3R | 24032192..24032340 | 1..149 | 730 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 23773591..23775091 | 439..1939 | 7475 | 99.8 | Plus |
3R | 31820162 | 3R | 23773228..23773522 | 144..438 | 1475 | 100 | Plus |
3R | 31820162 | 3R | 23773023..23773171 | 1..149 | 730 | 99.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 19855577..19855720 | 1..144 | 100 | -> | Plus |
chr3R | 19855783..19856076 | 145..438 | 100 | -> | Plus |
chr3R | 19856145..19857642 | 439..1936 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5933-RA | 1..1827 | 6..1832 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5933-RA | 1..1827 | 6..1832 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ime4-RA | 1..1827 | 6..1832 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5933-RA | 1..1827 | 6..1832 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ime4-RA | 1..1827 | 6..1832 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5933-RA | 1..1832 | 1..1832 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5933-RA | 1..1936 | 1..1936 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ime4-RA | 36..1971 | 1..1936 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5933-RA | 1..1832 | 1..1832 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ime4-RA | 36..1971 | 1..1936 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24032192..24032335 | 1..144 | 100 | -> | Plus |
3R | 24032398..24032691 | 145..438 | 100 | -> | Plus |
3R | 24032760..24034257 | 439..1936 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24032192..24032335 | 1..144 | 100 | -> | Plus |
3R | 24032398..24032691 | 145..438 | 100 | -> | Plus |
3R | 24032760..24034257 | 439..1936 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24032192..24032335 | 1..144 | 100 | -> | Plus |
3R | 24032398..24032691 | 145..438 | 100 | -> | Plus |
3R | 24032760..24034257 | 439..1936 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 19857914..19858057 | 1..144 | 100 | -> | Plus |
arm_3R | 19858120..19858413 | 145..438 | 100 | -> | Plus |
arm_3R | 19858482..19859979 | 439..1936 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23773229..23773522 | 145..438 | 100 | -> | Plus |
3R | 23773591..23775088 | 439..1936 | 99 | Plus | |
3R | 23773023..23773166 | 1..144 | 100 | -> | Plus |
Translation from 2 to 1831
> AT20169.hyp TMADAWDIKSLKTKRNTLREKLEKRKKERIEILSDIQEDLTNPKKELVEA DLEVQKEVLQALSSCSLALPIVSTQVVEKIAGSSLEMVNFILGKLANQGA IVIRNVTIGTEAGCEIISVQPKELKEILEDTNDTCQQKEEEAKRKLEVDD VDQPQEKTIKLESTVARKESTSLDAPDDIMMLLSMPSTREKQSKQVGEEI LELLTKPTAKERSVAEKFKSHGGAQVMEFCSHGTKVECLKAQQATAEMAA KKKQERRDEKELRPDVDAGENVTGKVPKTESAAEDGEIIAEVINNCEAES QESTDGSDTCSSETTDKCTKLHFKKIIQAHTDESLGDCSFLNTCFHMATC KYVHYEVDTLPHINTNKPTDVKTKLSLKRSVDSSCTLYPPQWIQCDLRFL DMTVLGKFAVVMADPPWDIHMELPYGTMSDDEMRALGVPALQDDGLIFLW VTGRAMELGRDCLKLWGYERVDELIWVKTNQLQRIIRTGRTGHWLNHGKE HCLVGMKGNPTNLNRGLDCDVIVAEVRATSHKPDEIYGIIERLSPGTRKI ELFGRPHNIQPNWITLGNQLDGIRLVDPELITQFQKRYPDGNCMSPASAN AASINGIQK*
Translation from 5 to 1831
> AT20169.pep MADAWDIKSLKTKRNTLREKLEKRKKERIEILSDIQEDLTNPKKELVEAD LEVQKEVLQALSSCSLALPIVSTQVVEKIAGSSLEMVNFILGKLANQGAI VIRNVTIGTEAGCEIISVQPKELKEILEDTNDTCQQKEEEAKRKLEVDDV DQPQEKTIKLESTVARKESTSLDAPDDIMMLLSMPSTREKQSKQVGEEIL ELLTKPTAKERSVAEKFKSHGGAQVMEFCSHGTKVECLKAQQATAEMAAK KKQERRDEKELRPDVDAGENVTGKVPKTESAAEDGEIIAEVINNCEAESQ ESTDGSDTCSSETTDKCTKLHFKKIIQAHTDESLGDCSFLNTCFHMATCK YVHYEVDTLPHINTNKPTDVKTKLSLKRSVDSSCTLYPPQWIQCDLRFLD MTVLGKFAVVMADPPWDIHMELPYGTMSDDEMRALGVPALQDDGLIFLWV TGRAMELGRDCLKLWGYERVDELIWVKTNQLQRIIRTGRTGHWLNHGKEH CLVGMKGNPTNLNRGLDCDVIVAEVRATSHKPDEIYGIIERLSPGTRKIE LFGRPHNIQPNWITLGNQLDGIRLVDPELITQFQKRYPDGNCMSPASANA ASINGIQK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17033-PA | 608 | GF17033-PA | 1..608 | 1..608 | 2858 | 90.7 | Plus |
Dana\GF14632-PA | 397 | GF14632-PA | 135..365 | 385..594 | 255 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11246-PA | 608 | GG11246-PA | 1..608 | 1..608 | 3183 | 97.5 | Plus |
Dere\GG10531-PA | 397 | GG10531-PA | 135..365 | 385..594 | 255 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18483-PA | 611 | GH18483-PA | 1..609 | 1..603 | 2671 | 83.9 | Plus |
Dgri\GH11588-PA | 401 | GH11588-PA | 139..369 | 385..594 | 241 | 28.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mettl3-PA | 608 | CG5933-PA | 1..608 | 1..608 | 3162 | 100 | Plus |
Mettl14-PA | 397 | CG7818-PA | 135..365 | 385..594 | 253 | 29.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24144-PA | 617 | GI24144-PA | 1..616 | 1..607 | 2667 | 83.3 | Plus |
Dmoj\GI17157-PA | 405 | GI17157-PA | 148..367 | 389..590 | 254 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18735-PA | 397 | GL18735-PA | 135..341 | 385..569 | 251 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19241-PA | 612 | GA19241-PA | 1..611 | 1..607 | 2823 | 88.4 | Plus |
Dpse\GA20607-PA | 397 | GA20607-PA | 135..341 | 385..569 | 251 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26549-PA | 584 | GM26549-PA | 1..584 | 1..608 | 3059 | 94.9 | Plus |
Dsec\GM16880-PA | 397 | GM16880-PA | 135..365 | 385..594 | 255 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21054-PA | 431 | GD21054-PA | 1..425 | 1..425 | 2180 | 97.6 | Plus |
Dsim\GD21055-PA | 154 | GD21055-PA | 1..154 | 455..608 | 851 | 100 | Plus |
Dsim\GD23521-PA | 397 | GD23521-PA | 135..365 | 385..594 | 255 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24659-PA | 614 | GJ24659-PA | 1..613 | 1..607 | 2713 | 83.8 | Plus |
Dvir\GJ17661-PA | 406 | GJ17661-PA | 144..350 | 385..569 | 247 | 30.4 | Plus |