![]() | BDGP Sequence Production Resources |
Search the DGRC for AT20328
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 203 |
Well: | 28 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG4390-RB |
Protein status: | AT20328.pep: gold |
Sequenced Size: | 1154 |
Gene | Date | Evidence |
---|---|---|
CG4390-RB | 2009-06-22 | Replacement based on scoring |
1154 bp assembled on 2009-07-30
GenBank Submission: BT088985.1
> AT20328.complete CAAACGTCAAGCAATACTCGATCGAAATCACAAAGTTATTGCAGCTCCCT TGGGAATGGGAAGAAATTTCCTTCGTCTGCCCAGTGTGAGTGGTAGAAGC TCATTCGTATATTCCATAGTCGCCTGTTCAAATCTTCCCAAGCGACGGAG CATTGTGCTCAGTTTTGGCCACATTATGACCGAGAACATGACGCTCGAAC AGCTGTCCGCAAATAAGTGCTTCGAGGGCGAGCAACGCGTGTATCGCCAT CGCTCGGACACCTTGAAGTGCGACATGACCTTTGGCGTCTTCCTGCCGCC GGCCGCTTTGGAGGGTAAACCGTGTCCGGTGCTGTTCTTCCTCAGCGGAC TGACCTGCACGCATGAGAACTTCATCCAGAAGAGCGGATTCCAGCAGCAC GCCGCCCGCCACAACCTGATCGTCGTCAATCCGGACACTTCGCCCAGGGG CGTGGAAATTGCCGGCCAAGATGATGCATACGACTTTGGAAGCGGGGCTG GATTCTATGTGGATGCAAAGGAGGAGCCGTGGTCGAAGCACTACAAGATG TACAGCTATGTGACCCAGGAGCTGGTGGATGTGGTCAATGCCAATCTGCC CGTGGTTCCCGGTAAACGCGGTATATTCGGCCACAGTATGGGCGGCCACG GAGCCCTGATCTGCGCGCTTAAGAATCCCGGGCTGTACCAGTCGGTGTCC GCTTTTGCGCCGATTGCCAATCCCACCGAGTGCCCGTGGGGCAAGAAGGC CTTTGCCGGCTATCTGGGCTCCAATCCGGATGACTGGGCCCTGTGGGATG CCACGCATCTGGTGTCGCAGTACGAGAGCACTCCGCAGGAGCTCTTCATC GACCAAGGTGCAGCAGACAACTTCCTGGCCGGCAAGCAGCTGCTGCCGGA GAACCTGCTGGCTGCCGCAGATGGCAACGATCACATCCAGACCATCTTCA AGCAGCGCGAGGGATACGATCACAGCTACTTCTACATCGCCACGTTCGTC GCCGAACACATCGCCTACCATGCCGCCCTGCTCACAGCTTCCGCTTGATG ATATTCCGCTTGTACATAATCGTTGGTTTCCACCGAAACCATAATTCAAC GTAAATTTGGCAGTAAATAAACAAATTTCGACGGAGAAAAAAAAAAAAAA AAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 15880366..15881317 | 185..1136 | 99 | <- | Minus |
chr3R | 15883510..15883693 | 1..184 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4390-RB | 1..993 | 56..1048 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4390-RB | 1..993 | 56..1048 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4390-RB | 1..993 | 56..1048 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4390-RB | 1..993 | 56..1048 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4390-RB | 16..1151 | 1..1136 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4390-RB | 16..1151 | 1..1136 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4390-RB | 16..1151 | 1..1136 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4390-RB | 1..1136 | 1..1136 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20056423..20057374 | 185..1136 | 99 | <- | Minus |
3R | 20059567..20059750 | 1..184 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20056423..20057374 | 185..1136 | 99 | <- | Minus |
3R | 20059567..20059750 | 1..184 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20056423..20057374 | 185..1136 | 99 | <- | Minus |
3R | 20059567..20059750 | 1..184 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 15882145..15883096 | 185..1136 | 99 | <- | Minus |
arm_3R | 15885289..15885472 | 1..184 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19797254..19798205 | 185..1136 | 99 | <- | Minus |
3R | 19800398..19800581 | 1..184 | 100 | Minus |
Translation from 1 to 1047
> AT20328.hyp KRQAILDRNHKVIAAPLGMGRNFLRLPSVSGRSSFVYSIVACSNLPKRRS IVLSFGHIMTENMTLEQLSANKCFEGEQRVYRHRSDTLKCDMTFGVFLPP AALEGKPCPVLFFLSGLTCTHENFIQKSGFQQHAARHNLIVVNPDTSPRG VEIAGQDDAYDFGSGAGFYVDAKEEPWSKHYKMYSYVTQELVDVVNANLP VVPGKRGIFGHSMGGHGALICALKNPGLYQSVSAFAPIANPTECPWGKKA FAGYLGSNPDDWALWDATHLVSQYESTPQELFIDQGAADNFLAGKQLLPE NLLAAADGNDHIQTIFKQREGYDHSYFYIATFVAEHIAYHAALLTASA*
Translation from 1 to 1047
> AT20328.pep KRQAILDRNHKVIAAPLGMGRNFLRLPSVSGRSSFVYSIVACSNLPKRRS IVLSFGHIMTENMTLEQLSANKCFEGEQRVYRHRSDTLKCDMTFGVFLPP AALEGKPCPVLFFLSGLTCTHENFIQKSGFQQHAARHNLIVVNPDTSPRG VEIAGQDDAYDFGSGAGFYVDAKEEPWSKHYKMYSYVTQELVDVVNANLP VVPGKRGIFGHSMGGHGALICALKNPGLYQSVSAFAPIANPTECPWGKKA FAGYLGSNPDDWALWDATHLVSQYESTPQELFIDQGAADNFLAGKQLLPE NLLAAADGNDHIQTIFKQREGYDHSYFYIATFVAEHIAYHAALLTASA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17336-PA | 327 | GF17336-PA | 1..327 | 19..347 | 1443 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15619-PA | 330 | GG15619-PA | 1..330 | 19..348 | 1724 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23926-PA | 285 | GH23926-PA | 1..285 | 63..346 | 1306 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4390-PB | 330 | CG4390-PB | 1..330 | 19..348 | 1763 | 100 | Plus |
CG4390-PA | 286 | CG4390-PA | 1..286 | 63..348 | 1541 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10052-PA | 285 | GI10052-PA | 1..285 | 63..346 | 1292 | 82.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12516-PA | 338 | GL12516-PA | 16..336 | 24..347 | 1394 | 79.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27533-PA | 338 | GA27533-PA | 16..336 | 24..347 | 1397 | 79.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17704-PA | 328 | GM17704-PA | 1..328 | 19..346 | 1758 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20081-PA | 328 | GD20081-PA | 1..328 | 19..346 | 1765 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23787-PA | 285 | GJ23787-PA | 1..285 | 63..346 | 1256 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22793-PA | 285 | GK22793-PA | 1..285 | 63..346 | 1330 | 83.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25088-PA | 330 | GE25088-PA | 1..330 | 19..348 | 1731 | 96.7 | Plus |