BDGP Sequence Production Resources |
Search the DGRC for AT20596
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 205 |
Well: | 96 |
Vector: | pOTB7 |
Associated Gene/Transcript | Strip-RA |
Protein status: | AT20596.pep: gold |
Preliminary Size: | 3806 |
Sequenced Size: | 3551 |
Gene | Date | Evidence |
---|---|---|
CG11526 | 2008-04-29 | Release 5.5 accounting |
CG11526 | 2008-08-15 | Release 5.9 accounting |
CG11526 | 2008-12-18 | 5.12 accounting |
3551 bp (3551 high quality bases) assembled on 2006-01-20
GenBank Submission: BT024459
> AT20596.complete GCCGTAAACGCCAGATCCTCGATGATGCAGTCCATCCAGTCTAGGATCAA CGTGCTTAACACCATTGCTGCTTCCAGCAAGCGGATTGAACGCGCCAGCG TTGACACGAACCCTTATTTCAAATTTAAAACAGCGGCAATTGCATCAGTC GCTGCCACATCCGAGCGAACGGCCTTGCCAGACGGCCAACACCATTTGCT GTTTGGTATTTTCCAACTACACAGCAAACGGTCGTACGAATTTTCTTCTT TTTCCATTGTGCGTTTTTGTTTTTGGCGAGAAACAAATTGCAGTCGAAAT TACCCAGTGAAATGCAGTGCGAATTGCTTAGTACGTCCATGTGCTACTAA GACCAAGTGGGAGAGAAAACCAGCGAGCAGGAGCAACCACGCCCACGCCA GGCGCACCGCCCACCGCCGCAGGATACACATACACGAGTAGCCCACACTC ACGCACATACACTTGCACACAAAAGAGATCCCTGTGTGGCGAAAAAGGAT TTGCGGAATGATGCTCACATCCATAAACAACTCCTTTGAGCAGGACACCC ACGATGCGGACGCCAACTGCGACGGGCCCGACCTGGACTTCGTGTACGCG GACGTGGATGGCTATCAGAACGAGATCGCTGAACTGTATAGCTACACGGA GTTCAGCGAGTTTCAGATGAACGTGAAGGCCTTCGAGGACCAGATGGAGC TGTACGACCTGCCGCCCAACTGGCAGAAGCAGGACTCCGCCTCCCAGCGC GGCATCGTGATGAAGCTGGTGGACCAGCTGGAGGTCTCCGATCGATCCTT TCGCATGCAGGCCGCCCGGTGCATCCTTTACCTGGCCCAAGGCTGCTGGG CGGAGGTTCAGTCGGACGAGGAGCAGCACCAGATCACCAGGGACAATGTG CTGGTGCTCTACCAACTCGGCGTCTTCGCCTCCTTCATCGACCTGCTCAA CATGGAGATCGAAAGCGCCTGCTCTCCGGACATTGTGGCCGTCAAGATCA CTAACGTCACGCTTGTGGACTCCACGGACATTCGGGTGATCCTATCTGTG CTCTACATCATCACAGAAACGATTCGCGATGAAAAGGAAAAGGGCAGCGA AGACTACAGAGAGCTGGCCGACTCCTTTGTGCAAGAAATCAACTCACCAC TACCAGATGGCGAACTTCTGGCCGTCAAGCTGTTGGGCATGATCACACGG TTTTGCAGTGGCGCAGCACCGCAGTTCCCCATGAAGAAGGTTGTCCTCCT GCTGTGGAAAGTTTCGCTGCTGGGACTGGGAGGCATGGATGTGCTCAAGA ATCTCAAGAACGAGTATCGATTGAAGGTGGGTTTGGAACCCATCACCGAG GACACGCTGGAGGTTACCAAGTGCATGCGAGCCAGCTCACCGCCGGCCAC AGCTACTGATATACTGGAGAACCAGTATCCCAAGCGGAACTTCAAACGCT CCCTGATGAAGCAGCGTTTTTTGGACGAGCCCGAGCAGATAGACATGGAG ATGGGCGGCAACGAGGGTCAAAATAATGCCAACAATGGCAGCGGCAATGG CGGAAACGGGGAGGAGGAACTCTCTCAGTACTACAGACCCTACGATGACC CCTCTTCGTCCGCATCCACCACCTCGACGGCAAATCCAAACAACCAGCCT AGCCTAACACAGCCACCCGCTGCTGTGCCTCCGGTACAGATCACGGCTCG CCTGCCCTGGACGCCCAAGGTGCGACAAAAGGACATTGACCAGTTTCTGG ACATTTCGCGGAATAAGTTCATCGGGTATTCGCTGATTGGTGACCACGAG AGTCTGGCTGGACTGCCGCAACCCATTCACGAGGGCTTTAAGACGCTGCA GCGGCACATGTATATGAGCCTGGCCGATGTGCAAATCAAGAAGGAGGAGG ACATAGCTAGGAACCCCATTTCCACGCACGAAGACGAAATCAAACTGACC CCGGCTGAGGTGTTGTACCAAGCCATCCTGCCAAACCTGCCGCAGTATAT GATCGCCCTCCTTAAGGTCCTGCTGGCAGCTTCGCCAACGTCCAAGTCCA AGACGGAGAGCATTAACATAATGGCCGATGTGCTGCCTAGGAAGATGCCG CTGACGGCCACCCAATCAACAAAGCTAACCGTCGACATTGGTCGGCACAA GGAGATCATTGTGAAGGCTGTCTCGGCCATCATCCTGCTATATTTAAAGC ATTTCAAGATAAACCATGTTTACCAGTTTGAGTTCATGTCGCAGCATCTC GTGTTCGCCAACTGCATCCCGCTGGTTTTGAAGTTCTTCAATCAGACAAT CACGGAGTACGTGAACACCAAGAACTCCATTCCTCTGCTCGATTTCCCGT CGTGTGTGATTGGTGAGCAACCGGATTTGAGTGGCGATAGCTTTGTGTAT GGCGGAGAGATGTCCGATAAGTCCTACTCTTGGCGGAACGTGTTCTCCTG CATAAACCTGCTGCGCATCCTCAACAAGCTGATCAAGTGGAAGCACTCGC GAGTGATGATGCTGGTGGTATTCAAGTCGGCACCAATCCTGAAGAAGACG CTTAAGGTGCGCCACGCCATGATGCAGCTGTACGTGCTGAAGCTGCTCAA GATGCAGACCAAGTACTTGGGCCGCCAGTGGCGGAAGTCCAATATGAAGA CCATGAGTGCAATTTACGCCAAGGTGCGGCATCGTCTAAACGACGATTGG GCCTTTGGCAACGACTTGGAGTCGCGTCCCTGGGACTTCCAGGCGGAGGA GTGTACGCTGCGGGCCTGCGTGGATCGATTCAACCTGCGACGCTATCCGG AAGCCACCCAGAAGTGTGGAAACAACGGCACGGCAGCTCAGAATGCGGAG AACGCCCAGCAATCCAACATGATGGCGGGCAACAATGGATGTGGCAATAA TGGCGACGCAAATGGCTATGGAAACAACGGTGGCGGTGGCAATGGCGGCC ACAACCAGCAGCAGCAGCTCAACGACTATGGTGTGGAGGGTGGCTTTCCC AGCGACGAGATCCTTACCCACTCGGACTTTGCCTTCTTCGGTCACTCGGG TTGGTGGGATCGCAAGGTCGAGCTGACGGATTACTTCAAGGCCAATTACG CGGTCTGGCTGGAGGAGGAGGTCTACAACAGTCAGACCGACTGGGACGCC CTCTAGGGCAGGGCTGCCATCGCTGCTCTAATATCCACATGCGCGTCATA AAAGCAAGAAGTTATTAACGTAATTGTAAGCATTAAGAAGTACATTGATA TAATCCATGTAGCCCGACCACGATTGAAACACCAACTACTCACTGAATTG GCAATAATTTGGCAAGCCACGGGCCTCCGCTGCGCTCCTCTTCACTAACT AGCATACGCGAATACCATACCCATAGCGATGACAAGCCTGTATATGTAAT GATTGTATTTTTTAATTTATATATTTATTATTTTACCTGTTCTGCGAGCC CTTGAAACGGATCGCGGCAATCGGCTTCTGTAGCGGAATAAACAAATTTG CTAGTTCGAAAACGACACTTGGCTTGAGGTTAAAAAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11526-RA | 3596 | CG11526-RA | 66..3596 | 1..3531 | 17415 | 99.5 | Plus |
CG11526-RB | 3377 | CG11526-RB | 389..3377 | 543..3531 | 14795 | 99.6 | Plus |
CG11526-RB | 3377 | CG11526-RB | 282..389 | 1..108 | 540 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 3322320..3324046 | 3172..1446 | 8485 | 99.4 | Minus |
chr3L | 24539361 | chr3L | 3324110..3325447 | 1445..108 | 6585 | 99.5 | Minus |
chr3L | 24539361 | chr3L | 3321894..3322253 | 3531..3172 | 1785 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 3328106..3328207 | 108..7 | 510 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 3322910..3324636 | 3172..1446 | 8485 | 99.4 | Minus |
3L | 28110227 | 3L | 3324700..3326037 | 1445..108 | 6600 | 99.6 | Minus |
3L | 28110227 | 3L | 3322481..3322843 | 3534..3172 | 1815 | 100 | Minus |
3L | 28110227 | 3L | 3328699..3328806 | 108..1 | 540 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 3322910..3324636 | 3172..1446 | 8485 | 99.4 | Minus |
3L | 28103327 | 3L | 3324700..3326037 | 1445..108 | 6600 | 99.5 | Minus |
3L | 28103327 | 3L | 3322481..3322843 | 3534..3172 | 1815 | 100 | Minus |
3L | 28103327 | 3L | 3328699..3328806 | 108..1 | 540 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 3321894..3322252 | 3173..3531 | 91 | <- | Minus |
chr3L | 3322320..3324046 | 1446..3172 | 99 | <- | Minus |
chr3L | 3324110..3325446 | 109..1445 | 99 | <- | Minus |
chr3L | 3328106..3328216 | 1..108 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11526-RA | 1..2649 | 508..3156 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11526-RA | 1..2649 | 508..3156 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11526-RA | 1..2649 | 508..3156 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11526-RA | 1..2649 | 508..3156 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Strip-RA | 1..2649 | 508..3156 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11526-RA | 66..3596 | 1..3531 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11526-RA | 66..3596 | 1..3531 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11526-RA | 66..3596 | 1..3531 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11526-RA | 66..3596 | 1..3531 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Strip-RA | 66..3596 | 1..3531 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3322484..3322842 | 3173..3531 | 100 | <- | Minus |
3L | 3322910..3324636 | 1446..3172 | 99 | <- | Minus |
3L | 3324700..3326036 | 109..1445 | 99 | <- | Minus |
3L | 3328699..3328806 | 1..108 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3322484..3322842 | 3173..3531 | 100 | <- | Minus |
3L | 3322910..3324636 | 1446..3172 | 99 | <- | Minus |
3L | 3324700..3326036 | 109..1445 | 99 | <- | Minus |
3L | 3328699..3328806 | 1..108 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3322484..3322842 | 3173..3531 | 100 | <- | Minus |
3L | 3322910..3324636 | 1446..3172 | 99 | <- | Minus |
3L | 3324700..3326036 | 109..1445 | 99 | <- | Minus |
3L | 3328699..3328806 | 1..108 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 3322484..3322842 | 3173..3531 | 100 | <- | Minus |
arm_3L | 3322910..3324636 | 1446..3172 | 99 | <- | Minus |
arm_3L | 3324700..3326036 | 109..1445 | 99 | <- | Minus |
arm_3L | 3328699..3328806 | 1..108 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3322484..3322842 | 3173..3531 | 100 | <- | Minus |
3L | 3322910..3324636 | 1446..3172 | 99 | <- | Minus |
3L | 3324700..3326036 | 109..1445 | 99 | <- | Minus |
3L | 3328699..3328806 | 1..108 | 100 | Minus |
Translation from 507 to 3155
> AT20596.pep MMLTSINNSFEQDTHDADANCDGPDLDFVYADVDGYQNEIAELYSYTEFS EFQMNVKAFEDQMELYDLPPNWQKQDSASQRGIVMKLVDQLEVSDRSFRM QAARCILYLAQGCWAEVQSDEEQHQITRDNVLVLYQLGVFASFIDLLNME IESACSPDIVAVKITNVTLVDSTDIRVILSVLYIITETIRDEKEKGSEDY RELADSFVQEINSPLPDGELLAVKLLGMITRFCSGAAPQFPMKKVVLLLW KVSLLGLGGMDVLKNLKNEYRLKVGLEPITEDTLEVTKCMRASSPPATAT DILENQYPKRNFKRSLMKQRFLDEPEQIDMEMGGNEGQNNANNGSGNGGN GEEELSQYYRPYDDPSSSASTTSTANPNNQPSLTQPPAAVPPVQITARLP WTPKVRQKDIDQFLDISRNKFIGYSLIGDHESLAGLPQPIHEGFKTLQRH MYMSLADVQIKKEEDIARNPISTHEDEIKLTPAEVLYQAILPNLPQYMIA LLKVLLAASPTSKSKTESINIMADVLPRKMPLTATQSTKLTVDIGRHKEI IVKAVSAIILLYLKHFKINHVYQFEFMSQHLVFANCIPLVLKFFNQTITE YVNTKNSIPLLDFPSCVIGEQPDLSGDSFVYGGEMSDKSYSWRNVFSCIN LLRILNKLIKWKHSRVMMLVVFKSAPILKKTLKVRHAMMQLYVLKLLKMQ TKYLGRQWRKSNMKTMSAIYAKVRHRLNDDWAFGNDLESRPWDFQAEECT LRACVDRFNLRRYPEATQKCGNNGTAAQNAENAQQSNMMAGNNGCGNNGD ANGYGNNGGGGNGGHNQQQQLNDYGVEGGFPSDEILTHSDFAFFGHSGWW DRKVELTDYFKANYAVWLEEEVYNSQTDWDAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23912-PA | 889 | GF23912-PA | 1..889 | 1..882 | 4614 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14265-PA | 882 | GG14265-PA | 1..882 | 1..882 | 4761 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15524-PA | 923 | GH15524-PA | 1..923 | 1..882 | 4274 | 88.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Strip-PC | 882 | CG11526-PC | 1..882 | 1..882 | 4625 | 100 | Plus |
Strip-PA | 882 | CG11526-PA | 1..882 | 1..882 | 4625 | 100 | Plus |
Strip-PB | 927 | CG11526-PB | 54..927 | 9..882 | 4570 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16801-PA | 903 | GI16801-PA | 1..903 | 1..882 | 4267 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16094-PA | 892 | GL16094-PA | 1..892 | 1..882 | 4124 | 89.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11051-PA | 898 | GA11051-PA | 1..898 | 1..882 | 4175 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14058-PA | 935 | GM14058-PA | 62..935 | 9..882 | 4719 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13333-PA | 361 | GD13333-PA | 1..361 | 522..882 | 1981 | 99.4 | Plus |
Dsim\GD13332-PA | 286 | GD13332-PA | 62..283 | 9..230 | 1165 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12546-PA | 907 | GJ12546-PA | 1..907 | 1..882 | 4321 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20380-PA | 907 | GK20380-PA | 1..907 | 1..882 | 4172 | 89.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20691-PA | 913 | GE20691-PA | 40..913 | 9..882 | 4706 | 98.7 | Plus |
Translation from 507 to 3155
> AT20596.hyp MMLTSINNSFEQDTHDADANCDGPDLDFVYADVDGYQNEIAELYSYTEFS EFQMNVKAFEDQMELYDLPPNWQKQDSASQRGIVMKLVDQLEVSDRSFRM QAARCILYLAQGCWAEVQSDEEQHQITRDNVLVLYQLGVFASFIDLLNME IESACSPDIVAVKITNVTLVDSTDIRVILSVLYIITETIRDEKEKGSEDY RELADSFVQEINSPLPDGELLAVKLLGMITRFCSGAAPQFPMKKVVLLLW KVSLLGLGGMDVLKNLKNEYRLKVGLEPITEDTLEVTKCMRASSPPATAT DILENQYPKRNFKRSLMKQRFLDEPEQIDMEMGGNEGQNNANNGSGNGGN GEEELSQYYRPYDDPSSSASTTSTANPNNQPSLTQPPAAVPPVQITARLP WTPKVRQKDIDQFLDISRNKFIGYSLIGDHESLAGLPQPIHEGFKTLQRH MYMSLADVQIKKEEDIARNPISTHEDEIKLTPAEVLYQAILPNLPQYMIA LLKVLLAASPTSKSKTESINIMADVLPRKMPLTATQSTKLTVDIGRHKEI IVKAVSAIILLYLKHFKINHVYQFEFMSQHLVFANCIPLVLKFFNQTITE YVNTKNSIPLLDFPSCVIGEQPDLSGDSFVYGGEMSDKSYSWRNVFSCIN LLRILNKLIKWKHSRVMMLVVFKSAPILKKTLKVRHAMMQLYVLKLLKMQ TKYLGRQWRKSNMKTMSAIYAKVRHRLNDDWAFGNDLESRPWDFQAEECT LRACVDRFNLRRYPEATQKCGNNGTAAQNAENAQQSNMMAGNNGCGNNGD ANGYGNNGGGGNGGHNQQQQLNDYGVEGGFPSDEILTHSDFAFFGHSGWW DRKVELTDYFKANYAVWLEEEVYNSQTDWDAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Strip-PC | 882 | CG11526-PC | 1..882 | 1..882 | 4625 | 100 | Plus |
Strip-PA | 882 | CG11526-PA | 1..882 | 1..882 | 4625 | 100 | Plus |
Strip-PB | 927 | CG11526-PB | 54..927 | 9..882 | 4570 | 99.7 | Plus |