Clone AT20767 Report

Search the DGRC for AT20767

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:207
Well:67
Vector:pOTB7
Associated Gene/TranscriptCG11068-RA
Protein status:AT20767.pep: gold
Preliminary Size:1102
Sequenced Size:1274

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11068 2002-01-01 Sim4 clustering to Release 2
CG11068 2002-01-03 Blastp of sequenced clone
CG11068 2003-01-01 Sim4 clustering to Release 3
CG11068 2008-04-29 Release 5.5 accounting
CG11068 2008-08-15 Release 5.9 accounting
CG11068 2008-12-18 5.12 accounting

Clone Sequence Records

AT20767.complete Sequence

1274 bp (1274 high quality bases) assembled on 2002-01-03

GenBank Submission: AY075241

> AT20767.complete
CTGGTCCGGAATAGACATTGTCGACTGACTTTCTTATTTTTTATTGTATC
AGTTAAAATTCTCAATGTGTCGATAAGAAAACAGACGCTGAACGAAAAAA
ACAAGAAAATTCGTAGTGTTATTCATTTGTTTGCCTGCCCCAACCCAAAG
AATAAAGTGTGATTTTCACAATGGCCAAGGATCAAGAGGGAAACACATAT
CAACCAACCGTCCCGGAGTCCACGGAGGACCAAAAACGGGAGCAGCGTGC
CCGCCTCATCAAAGCATTGAGCCGCTTCAAGCCCCGCGATGCCAGTCCGC
TTCAGTTCTACAACTGCGTTCGCGAATTGTGCATCATGCACAATTGCAGC
ATCGACGAGGGTCTGGAACGAGCGGCATTAACTTGGCCAGGACTTAGCAT
GCGACAGCGTGAGCTATACGATTCGCAACGTCACGCAGAACTACCGATAC
CTGTTCCACGTCACCTGATCTACCGAGCATTCCAGAAGGAGAGCAAGGGT
CTGTGGTCCCTGGGCCGCTCCTCGGTGGGTGGCAACAAGCAGAGCACCCG
CTACACCCTGGAGTCCTACAAGCCGCCGCCCAAGTTGTCCCGTCTAAAGA
CGCAGCTGAATGAGCGTCGTCCCAAGTACGACAATCTATTGGATCTGCCG
CCCAAGGAGGCAGCTATGCGCGTGCCACCGGAGCCGAATCGTAAATTTTC
CAGGGTATCACCATCATCCGGTCGACGGATACGTAGTTTTACGCCACCGG
CCGTTACGCGTGTTCGATCCATTCAGCAGATTCTGTCAATGGCCAGTGTG
GACATGAAGAAGAGCTTACGGTTACGGAATCCGGGTAAATGCAATCGAAC
CAAGAAACCCGAAACGGTTGAAGCCGGCAAATCGCAACCGGATAAACTGC
CAACCGGAATTTCCAAGCTGACGAAAAAGAAGACGATCAAACGCAAAGGC
ATCGCCTCCAAGGCAAAGCGTTTGGCCAAGGATGAGGATCTGCTGTCCTC
GAACAGCTGGGAAGAGGCCATCGGATGTGTTCGTCGGCGTCTCATGATGT
ACAAGCCCTTAAAGTCCTAAATCCTAACTATATATACTACATATATATAT
GTATATACCCCACAAAATGGTGTCAGTAAGTGTAGTTTTTACTTGTTAAA
GAATTACATCATTGTCCTCAATTGAAAGGCTGATTGTTAGTCGTGCTCTT
CTTTAAGACAACGCAAGCCCCAAGATGTTAAATTAAAAGTATGTGCTTAT
AACTCAAAAAAAAAAAAAAAAAAA

AT20767.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:34:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG11068-RA 1419 CG11068-RA 74..1330 1..1257 6285 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 21:27:56
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 13846354..13847184 425..1255 4155 100 Plus
chrX 22417052 chrX 13845861..13846285 1..425 2125 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:54:59 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 21:27:54
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13955744..13956576 425..1257 4165 100 Plus
X 23542271 X 13955251..13955675 1..425 2125 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:02:44
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 13963842..13964674 425..1257 4165 100 Plus
X 23527363 X 13963349..13963773 1..425 2125 100 Plus
Blast to na_te.dros performed on 2019-03-15 21:27:54 has no hits.

AT20767.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 21:28:48 Download gff for AT20767.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 13845861..13846285 1..425 100 -> Plus
chrX 13846355..13847184 426..1255 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:15:39 Download gff for AT20767.complete
Subject Subject Range Query Range Percent Splice Strand
CG11068-RA 1..900 171..1070 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:57:23 Download gff for AT20767.complete
Subject Subject Range Query Range Percent Splice Strand
CG11068-RA 1..900 171..1070 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:48:45 Download gff for AT20767.complete
Subject Subject Range Query Range Percent Splice Strand
CG11068-RA 1..900 171..1070 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:22:09 Download gff for AT20767.complete
Subject Subject Range Query Range Percent Splice Strand
CG11068-RA 1..900 171..1070 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:54:07 Download gff for AT20767.complete
Subject Subject Range Query Range Percent Splice Strand
CG11068-RA 1..900 171..1070 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:21:57 Download gff for AT20767.complete
Subject Subject Range Query Range Percent Splice Strand
CG11068-RA 1..1255 1..1255 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:57:23 Download gff for AT20767.complete
Subject Subject Range Query Range Percent Splice Strand
CG11068-RA 1..1255 1..1255 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:48:45 Download gff for AT20767.complete
Subject Subject Range Query Range Percent Splice Strand
CG11068-RA 1..1255 1..1255 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:22:09 Download gff for AT20767.complete
Subject Subject Range Query Range Percent Splice Strand
CG11068-RA 1..1255 1..1255 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:07 Download gff for AT20767.complete
Subject Subject Range Query Range Percent Splice Strand
CG11068-RA 16..1270 1..1255 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:28:48 Download gff for AT20767.complete
Subject Subject Range Query Range Percent Splice Strand
X 13955251..13955675 1..425 100 -> Plus
X 13955745..13956574 426..1255 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:28:48 Download gff for AT20767.complete
Subject Subject Range Query Range Percent Splice Strand
X 13955251..13955675 1..425 100 -> Plus
X 13955745..13956574 426..1255 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:28:48 Download gff for AT20767.complete
Subject Subject Range Query Range Percent Splice Strand
X 13955251..13955675 1..425 100 -> Plus
X 13955745..13956574 426..1255 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:48:45 Download gff for AT20767.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 13849284..13849708 1..425 100 -> Plus
arm_X 13849778..13850607 426..1255 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:57:04 Download gff for AT20767.complete
Subject Subject Range Query Range Percent Splice Strand
X 13963349..13963773 1..425 100 -> Plus
X 13963843..13964672 426..1255 100   Plus

AT20767.pep Sequence

Translation from 170 to 1069

> AT20767.pep
MAKDQEGNTYQPTVPESTEDQKREQRARLIKALSRFKPRDASPLQFYNCV
RELCIMHNCSIDEGLERAALTWPGLSMRQRELYDSQRHAELPIPVPRHLI
YRAFQKESKGLWSLGRSSVGGNKQSTRYTLESYKPPPKLSRLKTQLNERR
PKYDNLLDLPPKEAAMRVPPEPNRKFSRVSPSSGRRIRSFTPPAVTRVRS
IQQILSMASVDMKKSLRLRNPGKCNRTKKPETVEAGKSQPDKLPTGISKL
TKKKTIKRKGIASKAKRLAKDEDLLSSNSWEEAIGCVRRRLMMYKPLKS*

AT20767.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 03:02:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19230-PA 345 GF19230-PA 58..344 12..298 884 66.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 03:02:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17818-PA 301 GG17818-PA 1..299 1..299 1314 85.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 03:02:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17676-PA 253 GH17676-PA 11..144 24..158 366 49.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:10:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG11068-PA 299 CG11068-PA 1..299 1..299 1549 100 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 03:02:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14824-PA 331 GL14824-PA 1..198 1..198 659 65.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 03:02:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26242-PA 331 GA26242-PA 1..198 1..198 654 64.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 03:02:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17648-PA 301 GM17648-PA 1..299 1..299 1478 93.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 03:02:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24157-PA 136 GD24157-PA 1..134 166..299 605 88.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 03:02:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19034-PA 301 GJ19034-PA 24..181 23..193 429 48.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 03:02:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25845-PA 190 GK25845-PA 3..174 22..191 557 61.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 03:02:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17113-PA 302 GE17113-PA 1..300 1..299 1393 88 Plus

AT20767.hyp Sequence

Translation from 170 to 1069

> AT20767.hyp
MAKDQEGNTYQPTVPESTEDQKREQRARLIKALSRFKPRDASPLQFYNCV
RELCIMHNCSIDEGLERAALTWPGLSMRQRELYDSQRHAELPIPVPRHLI
YRAFQKESKGLWSLGRSSVGGNKQSTRYTLESYKPPPKLSRLKTQLNERR
PKYDNLLDLPPKEAAMRVPPEPNRKFSRVSPSSGRRIRSFTPPAVTRVRS
IQQILSMASVDMKKSLRLRNPGKCNRTKKPETVEAGKSQPDKLPTGISKL
TKKKTIKRKGIASKAKRLAKDEDLLSSNSWEEAIGCVRRRLMMYKPLKS*

AT20767.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:08:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG11068-PA 299 CG11068-PA 1..299 1..299 1549 100 Plus