BDGP Sequence Production Resources |
Search the DGRC for AT20903
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 209 |
Well: | 3 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG13544-RA |
Protein status: | AT20903.pep: gold |
Preliminary Size: | 1104 |
Sequenced Size: | 1248 |
Gene | Date | Evidence |
---|---|---|
CG13544 | 2002-01-01 | Sim4 clustering to Release 2 |
CG13544 | 2002-01-03 | Blastp of sequenced clone |
CG13544 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13544 | 2008-04-29 | Release 5.5 accounting |
CG13544 | 2008-08-15 | Release 5.9 accounting |
CG13544 | 2008-12-18 | 5.12 accounting |
1248 bp (1248 high quality bases) assembled on 2002-01-03
GenBank Submission: AY075246
> AT20903.complete AACACTAAACATATACACTTAAATTAGGAAGAAGTAGAGCGGTTTATTTT GCAGGATGTTCTCAGGACTTATACCCATGATGCAGCAGACTCGGAGGGCC ACGGTTCCACTAGGTGGGGACAGCCGAAGTGGCAACACCGAGTCCCAAAT TGGATCCAGTAAATCTTCTAATTGCAGATTGCACCTAATTTCGCGAACCG GAAAGCTTCTTCTGGACTACAAGCAATACAAGGCAGCCCGAACTATCCAA AACAACTGGCGGAAATTCTATTTTCGAAAGTATTTCAAGGATCTAAGAAA GGCGGTCATCACGATTCAGCGCTGGTGGCGCGGATTCTCGGTCCGAAAAA ACCACTTCAGGTATGTGGAGAACCTGCTGCAGAAGCGGGTTCAGGATCAC CACCATCGGGCGGCCACCAAGATCCAGGCCCTATTCCGAGGATGGAAGAG CCGGCGCACCATTCACGATCACAGCAAATTGCTCAGGAAGCAGGTGTGCG CCGCCGAGGATCTGCTCAATTGCGTGGCCTTCAAGCTGCACCACCTGCTC CGCACCTTCGCGATTCCAGGTGTATATTCGCTCAAGAACTCAAACTGCAT GTCGCGAGTAGAGAAGCTGCTGGCCAGCTTGCATTTTCGCTTCCACAATG GAAGGGTTAAGACGCAACTGGCTAAAGAACTGGCCGATCGAGGAAAGGAT ACGGAAACTTTCAAGAGGAGCAACAAGTTCAGCAAAGTCCCATTCGAAGG AGCCCGCTATTGGAGCCAATGCAAGCCAAAGTGCGAGGCCGCCCTGAAAA TGTCCAAGAATATTGAAAGGCGCATGTACAGAATCATCGAGATTTACGAT GCTTCACAGAGAGAAGCCCATGCGGCGTTGGTCGAAAAGAATAGGGCGTA CAGAAAGCACAAGGGGCTTATGCAGAACATCAAGAAATCGGCGGAGAAGA GTAAACGCGACTTCTGCGGCGATGTCATCGCCAGTATGAGACGCTGGAAA ATCCTGGTGGACAACGATTTGACTGTGGACAAGAACATATTCAAAAACCC GCAAAATTTGGAGAGGTTCGTTGCTGAAATATCGCAATATGCAAATGAGT TCGAGAACTGCACCTGCTATTGCCGCATTCCCGTATTCACCGAAATCTAT TGCGGCTAAATGTCATTAAAACCAGTAGTCTCGTACCAAGTAGTGAAAAT AAATACAATTTTCTAACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13544-RA | 1296 | CG13544-RA | 75..1295 | 1..1221 | 6000 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 19026260..19026659 | 594..195 | 2000 | 100 | Minus |
chr2R | 21145070 | chr2R | 19025520..19025835 | 1218..903 | 1580 | 100 | Minus |
chr2R | 21145070 | chr2R | 19025892..19026205 | 908..595 | 1555 | 99.7 | Minus |
chr2R | 21145070 | chr2R | 19026848..19026973 | 126..1 | 630 | 100 | Minus |
chr2R | 21145070 | chr2R | 19026724..19026793 | 195..126 | 350 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 23139820..23140219 | 594..195 | 1970 | 99.5 | Minus |
2R | 25286936 | 2R | 23139077..23139395 | 1221..903 | 1565 | 99.4 | Minus |
2R | 25286936 | 2R | 23139452..23139765 | 908..595 | 1525 | 99 | Minus |
2R | 25286936 | 2R | 23140408..23140533 | 126..1 | 615 | 99.2 | Minus |
2R | 25286936 | 2R | 23140284..23140353 | 195..126 | 350 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 23141019..23141418 | 594..195 | 1970 | 99.5 | Minus |
2R | 25260384 | 2R | 23140276..23140594 | 1221..903 | 1565 | 99.3 | Minus |
2R | 25260384 | 2R | 23140651..23140964 | 908..595 | 1525 | 99 | Minus |
2R | 25260384 | 2R | 23141607..23141732 | 126..1 | 615 | 99.2 | Minus |
2R | 25260384 | 2R | 23141483..23141552 | 195..126 | 350 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 19025520..19025835 | 903..1218 | 100 | <- | Minus |
chr2R | 19025898..19026205 | 595..902 | 100 | <- | Minus |
chr2R | 19026260..19026658 | 196..594 | 100 | <- | Minus |
chr2R | 19026724..19026792 | 127..195 | 100 | <- | Minus |
chr2R | 19026848..19026973 | 1..126 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13544-RA | 1..1104 | 56..1159 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13544-RA | 1..1104 | 56..1159 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13544-RA | 1..1104 | 56..1159 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13544-RA | 1..1104 | 56..1159 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13544-RA | 1..1104 | 56..1159 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13544-RA | 52..1269 | 1..1218 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13544-RA | 52..1269 | 1..1218 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13544-RA | 45..1262 | 1..1218 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13544-RA | 52..1269 | 1..1218 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13544-RA | 45..1262 | 1..1218 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23140284..23140352 | 127..195 | 100 | <- | Minus |
2R | 23140408..23140533 | 1..126 | 99 | Minus | |
2R | 23139080..23139395 | 903..1218 | 99 | <- | Minus |
2R | 23139458..23139765 | 595..902 | 99 | <- | Minus |
2R | 23139820..23140218 | 196..594 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23140284..23140352 | 127..195 | 100 | <- | Minus |
2R | 23140408..23140533 | 1..126 | 99 | Minus | |
2R | 23139080..23139395 | 903..1218 | 99 | <- | Minus |
2R | 23139458..23139765 | 595..902 | 99 | <- | Minus |
2R | 23139820..23140218 | 196..594 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23140284..23140352 | 127..195 | 100 | <- | Minus |
2R | 23140408..23140533 | 1..126 | 99 | Minus | |
2R | 23139080..23139395 | 903..1218 | 99 | <- | Minus |
2R | 23139458..23139765 | 595..902 | 99 | <- | Minus |
2R | 23139820..23140218 | 196..594 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 19027343..19027741 | 196..594 | 99 | <- | Minus |
arm_2R | 19027807..19027875 | 127..195 | 100 | <- | Minus |
arm_2R | 19027931..19028056 | 1..126 | 99 | Minus | |
arm_2R | 19026981..19027288 | 595..902 | 99 | <- | Minus |
arm_2R | 19026603..19026918 | 903..1218 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23140297..23140612 | 903..1218 | 99 | <- | Minus |
2R | 23140675..23140982 | 595..902 | 99 | <- | Minus |
2R | 23141037..23141435 | 196..594 | 99 | <- | Minus |
2R | 23141501..23141569 | 127..195 | 100 | <- | Minus |
2R | 23141625..23141750 | 1..126 | 99 | Minus |
Translation from 55 to 1158
> AT20903.pep MFSGLIPMMQQTRRATVPLGGDSRSGNTESQIGSSKSSNCRLHLISRTGK LLLDYKQYKAARTIQNNWRKFYFRKYFKDLRKAVITIQRWWRGFSVRKNH FRYVENLLQKRVQDHHHRAATKIQALFRGWKSRRTIHDHSKLLRKQVCAA EDLLNCVAFKLHHLLRTFAIPGVYSLKNSNCMSRVEKLLASLHFRFHNGR VKTQLAKELADRGKDTETFKRSNKFSKVPFEGARYWSQCKPKCEAALKMS KNIERRMYRIIEIYDASQREAHAALVEKNRAYRKHKGLMQNIKKSAEKSK RDFCGDVIASMRRWKILVDNDLTVDKNIFKNPQNLERFVAEISQYANEFE NCTCYCRIPVFTEIYCG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13314-PA | 366 | GF13314-PA | 1..365 | 1..366 | 1077 | 56 | Plus |
Dana\GF14926-PA | 315 | GF14926-PA | 2..309 | 58..364 | 480 | 34 | Plus |
Dana\GF14929-PA | 578 | GF14929-PA | 33..344 | 29..339 | 378 | 34 | Plus |
Dana\GF14929-PA | 578 | GF14929-PA | 321..509 | 45..232 | 320 | 38.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20062-PA | 367 | GG20062-PA | 1..367 | 1..367 | 1683 | 83.7 | Plus |
Dere\GG25178-PA | 352 | GG25178-PA | 9..334 | 28..349 | 484 | 35.7 | Plus |
Dere\GG25181-PA | 391 | GG25181-PA | 52..343 | 46..354 | 393 | 33.3 | Plus |
Dere\GG25182-PA | 307 | GG25182-PA | 40..278 | 35..278 | 339 | 32.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10387-PA | 350 | GH10387-PA | 30..349 | 46..366 | 798 | 48.8 | Plus |
Dgri\GH23059-PA | 329 | GH23059-PA | 22..323 | 51..354 | 653 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13544-PA | 367 | CG13544-PA | 1..367 | 1..367 | 1944 | 100 | Plus |
CG31735-PC | 312 | CG31735-PC | 4..294 | 60..349 | 486 | 36.4 | Plus |
CG31735-PA | 312 | CG31735-PA | 4..294 | 60..349 | 486 | 36.4 | Plus |
CG12448-PC | 352 | CG12448-PC | 40..351 | 34..366 | 428 | 30.4 | Plus |
CG18063-PD | 371 | CG18063-PD | 43..355 | 45..354 | 398 | 30.6 | Plus |
CG18063-PE | 372 | CG18063-PE | 44..356 | 45..354 | 398 | 30.6 | Plus |
CG18063-PC | 372 | CG18063-PC | 44..356 | 45..354 | 398 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21130-PA | 355 | GI21130-PA | 38..354 | 48..366 | 807 | 48.9 | Plus |
Dmoj\GI12944-PA | 310 | GI12944-PA | 1..302 | 53..356 | 621 | 42 | Plus |
Dmoj\GI17366-PA | 304 | GI17366-PA | 61..296 | 48..281 | 294 | 33.5 | Plus |
Dmoj\GI17367-PA | 209 | GI17367-PA | 6..156 | 82..232 | 214 | 34.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11293-PA | 587 | GL11293-PA | 241..586 | 23..366 | 1010 | 55.2 | Plus |
Dper\GL15300-PA | 351 | GL15300-PA | 4..343 | 28..367 | 641 | 37.4 | Plus |
Dper\GL15302-PA | 357 | GL15302-PA | 49..310 | 46..304 | 424 | 35.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12353-PA | 543 | GA12353-PA | 201..542 | 27..366 | 1006 | 55.3 | Plus |
Dpse\GA29041-PA | 635 | GA29041-PA | 269..626 | 14..366 | 640 | 37.5 | Plus |
Dpse\GA11642-PA | 357 | GA11642-PA | 49..310 | 46..304 | 424 | 35.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15577-PA | 359 | GM15577-PA | 1..359 | 1..367 | 1675 | 86.6 | Plus |
Dsec\GM18639-PA | 353 | GM18639-PA | 39..335 | 45..349 | 394 | 33.3 | Plus |
Dsec\GM18642-PA | 375 | GM18642-PA | 20..329 | 32..362 | 382 | 30.3 | Plus |
Dsec\GM18643-PA | 208 | GM18643-PA | 43..197 | 45..198 | 299 | 37.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25077-PA | 367 | GD25077-PA | 1..367 | 1..367 | 1915 | 96.5 | Plus |
Dsim\GD24026-PA | 352 | GD24026-PA | 29..334 | 45..349 | 481 | 36.7 | Plus |
Dsim\GD24029-PA | 393 | GD24029-PA | 38..347 | 32..362 | 391 | 30.6 | Plus |
Dsim\GD24030-PA | 371 | GD24030-PA | 43..355 | 45..354 | 377 | 28.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18189-PA | 334 | GJ18189-PA | 4..333 | 39..366 | 773 | 45.9 | Plus |
Dvir\GJ20979-PA | 263 | GJ20979-PA | 1..262 | 101..366 | 660 | 47.7 | Plus |
Dvir\GJ18044-PA | 246 | GJ18044-PA | 7..193 | 83..316 | 178 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19591-PA | 368 | GK19591-PA | 1..367 | 1..366 | 952 | 49 | Plus |
Dwil\GK24765-PA | 346 | GK24765-PA | 10..345 | 26..366 | 819 | 47.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11599-PA | 362 | GE11599-PA | 1..362 | 1..367 | 1707 | 85 | Plus |
Dyak\GE21188-PA | 350 | GE21188-PA | 4..342 | 22..359 | 500 | 35.6 | Plus |
Dyak\GE21222-PA | 392 | GE21222-PA | 52..343 | 46..354 | 397 | 32.7 | Plus |
Dyak\GE21233-PA | 391 | GE21233-PA | 45..375 | 45..354 | 336 | 26.6 | Plus |
Translation from 55 to 1158
> AT20903.hyp MFSGLIPMMQQTRRATVPLGGDSRSGNTESQIGSSKSSNCRLHLISRTGK LLLDYKQYKAARTIQNNWRKFYFRKYFKDLRKAVITIQRWWRGFSVRKNH FRYVENLLQKRVQDHHHRAATKIQALFRGWKSRRTIHDHSKLLRKQVCAA EDLLNCVAFKLHHLLRTFAIPGVYSLKNSNCMSRVEKLLASLHFRFHNGR VKTQLAKELADRGKDTETFKRSNKFSKVPFEGARYWSQCKPKCEAALKMS KNIERRMYRIIEIYDASQREAHAALVEKNRAYRKHKGLMQNIKKSAEKSK RDFCGDVIASMRRWKILVDNDLTVDKNIFKNPQNLERFVAEISQYANEFE NCTCYCRIPVFTEIYCG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13544-PA | 367 | CG13544-PA | 1..367 | 1..367 | 1944 | 100 | Plus |
CG31735-PC | 312 | CG31735-PC | 4..294 | 60..349 | 486 | 36.4 | Plus |
CG31735-PA | 312 | CG31735-PA | 4..294 | 60..349 | 486 | 36.4 | Plus |
CG12448-PC | 352 | CG12448-PC | 40..351 | 34..366 | 428 | 30.4 | Plus |
CG18063-PD | 371 | CG18063-PD | 43..355 | 45..354 | 398 | 30.6 | Plus |