BDGP Sequence Production Resources |
Search the DGRC for AT20942
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 209 |
Well: | 42 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG1690-RA |
Protein status: | AT20942.pep: gold |
Preliminary Size: | 578 |
Sequenced Size: | 1094 |
Gene | Date | Evidence |
---|---|---|
CG1690 | 2002-01-01 | Sim4 clustering to Release 2 |
CG1690 | 2002-01-18 | Blastp of sequenced clone |
CG1690 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1690 | 2008-04-29 | Release 5.5 accounting |
CG1690 | 2008-08-15 | Release 5.9 accounting |
CG1690 | 2008-12-18 | 5.12 accounting |
1094 bp (1094 high quality bases) assembled on 2002-01-18
GenBank Submission: AY089384
> AT20942.complete GTCAAAACTAGTTTTCACCTGCCAGTGTTTAAGGCCAAAAATCTTTGATT TTACGAACGTTCGTCAACATAAATTGTTGTACTAAATTCAAAGAAACTAA ATCCGCTTCCAAGACGCGATTACAGTGATTGCACACTACACCCAATATTA GGCGATTAAATTATTTGTACGCTCCAACGATTAAAAAACTCAATACCCAA TGGATGCCGCCGAGGGTCAAAGCTTGGTGATCAAAATGGCGCAAAAGAAC AAGGAGACCCAGACTGTGAAGCTGGTGCCCGGAGGCGGTCTGGTCAACAA CTGGTTTGCCCCGGCTACGTATGGGCCAGCAGGGATTCCATTTGGGGCTA GTCCCATGATCCCACCGCCGCCCGTTCCGAATCACAGCGTATCGTGCCAG TTTTACATGGACCGGGAGGAGCAGCTGTACCGCCGCGCCTGCCAGATGAA GGGCATCCGGGTGGAGCGGGTCTCTGAGATCCGCGAGGAGGAGGACGACT CGAACGGCTCCGAGGAGGAGCCTTCGAAGGGCATCCGCTACCGCTACACC CTGGACGAGATGAAAAGCTTCAACCCATACCGTTTTATCAACTTTTAAAT GTTCCCAAAACGTCCCAAATAGCCGTCATAGACGTCATAGCCGTCACACT TTCACTTTTACCCACATCGCACCGTCAGCACCTCAATATTCAAGTTGATT TAAGATCCATAACTAGGTCTAGCTTCGCCACCCTACCCACATAAGATGTC AGCTTATAGGTTTATCTTGCATGCCTAAAAATCGCAAGGAGAATCACACG AAAAACAGGAACCCAGGACACTGCCCATTTGCTTGTTGTTGCCGTATTTC CATGTAGACTCAAGATCCAAGACTAGCACTAACTTCGCCACTACTTCCAC AATTTCACATTAGATGCAAGATTATATGGACATCGTGCATGCCTCCAAAG CGTATTGGGAATCACAAATGAAACAGGAACCCCGGACACGGCTCATTTGC TTGTTGTTACCGTATCACTCGCCCGATGAAAACAATAAAGAATTGTTCAT AAATGACATCCTGGGATGTCAACAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1690-RA | 1134 | CG1690-RA | 36..1113 | 1..1078 | 5360 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 5644363..5645182 | 1073..254 | 4100 | 100 | Minus |
chr2R | 21145070 | chr2R | 5645250..5645503 | 254..1 | 1270 | 100 | Minus |
chr2R | 21145070 | chr2R | 5644421..5644530 | 847..738 | 190 | 78.2 | Minus |
chr2R | 21145070 | chr2R | 5644589..5644698 | 1015..906 | 190 | 78.2 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 9756923..9757747 | 1078..254 | 4095 | 99.8 | Minus |
2R | 25286936 | 2R | 9757815..9758068 | 254..1 | 1270 | 100 | Minus |
2R | 25286936 | 2R | 9756986..9757095 | 847..738 | 190 | 78.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 5644363..5645181 | 255..1073 | 100 | <- | Minus |
chr2R | 5645250..5645503 | 1..254 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1690-RA | 1..399 | 200..598 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1690-RA | 1..399 | 200..598 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1690-RA | 1..399 | 200..598 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1690-RA | 1..399 | 200..598 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1690-RA | 1..399 | 200..598 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1690-RA | 1..1073 | 1..1073 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1690-RA | 1..1073 | 1..1073 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1690-RA | 1..1073 | 1..1073 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1690-RA | 1..1073 | 1..1073 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1690-RA | 1..1073 | 1..1073 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9756928..9757746 | 255..1073 | 99 | <- | Minus |
2R | 9757815..9758068 | 1..254 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9756928..9757746 | 255..1073 | 99 | <- | Minus |
2R | 9757815..9758068 | 1..254 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9756928..9757746 | 255..1073 | 99 | <- | Minus |
2R | 9757815..9758068 | 1..254 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 5644433..5645251 | 255..1073 | 99 | <- | Minus |
arm_2R | 5645320..5645573 | 1..254 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9758127..9758945 | 255..1073 | 99 | <- | Minus |
2R | 9759014..9759267 | 1..254 | 100 | Minus |
Translation from 199 to 597
> AT20942.pep MDAAEGQSLVIKMAQKNKETQTVKLVPGGGLVNNWFAPATYGPAGIPFGA SPMIPPPPVPNHSVSCQFYMDREEQLYRRACQMKGIRVERVSEIREEEDD SNGSEEEPSKGIRYRYTLDEMKSFNPYRFINF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11482-PA | 132 | GF11482-PA | 1..132 | 1..132 | 506 | 73.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25265-PA | 132 | GG25265-PA | 1..132 | 1..132 | 597 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22849-PA | 119 | GH22849-PA | 1..117 | 1..132 | 274 | 52.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1690-PB | 132 | CG1690-PB | 1..132 | 1..132 | 704 | 100 | Plus |
CG1690-PA | 132 | CG1690-PA | 1..132 | 1..132 | 704 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21228-PA | 115 | GI21228-PA | 1..113 | 1..132 | 356 | 63.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17322-PA | 131 | GL17322-PA | 1..129 | 1..132 | 223 | 45.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14205-PA | 131 | GA14205-PA | 1..129 | 1..132 | 226 | 45.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20582-PA | 80 | GM20582-PA | 1..80 | 53..132 | 408 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10054-PA | 132 | GD10054-PA | 1..132 | 1..132 | 673 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20831-PA | 115 | GJ20831-PA | 1..113 | 1..132 | 354 | 62.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15617-PA | 154 | GK15617-PA | 1..152 | 1..130 | 336 | 53.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22094-PA | 132 | GE22094-PA | 1..132 | 1..132 | 638 | 87.9 | Plus |
Translation from 199 to 597
> AT20942.hyp MDAAEGQSLVIKMAQKNKETQTVKLVPGGGLVNNWFAPATYGPAGIPFGA SPMIPPPPVPNHSVSCQFYMDREEQLYRRACQMKGIRVERVSEIREEEDD SNGSEEEPSKGIRYRYTLDEMKSFNPYRFINF*