BDGP Sequence Production Resources |
Search the DGRC for AT21004
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 210 |
Well: | 4 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG17991-RA |
Protein status: | AT21004.pep: gold |
Preliminary Size: | 885 |
Sequenced Size: | 1108 |
Gene | Date | Evidence |
---|---|---|
CG17991 | 2002-01-01 | Sim4 clustering to Release 2 |
CG17991 | 2002-01-18 | Blastp of sequenced clone |
CG17991 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17991 | 2008-04-29 | Release 5.5 accounting |
CG17991 | 2008-08-15 | Release 5.9 accounting |
CG17991 | 2008-12-18 | 5.12 accounting |
1108 bp (1108 high quality bases) assembled on 2002-01-18
GenBank Submission: AY089386
> AT21004.complete ATTAATTGTAAACATATGCCCTGGAGTTTTCTCAGACTCAAGTTTTATAT ACAACAAGATCAATAATGGCTAGCAACGTTGCTGCGCCACAAGCTTCAGC TGGAGGAGATTCGACGGAACTGGAGCGCTGTTGCTGGATCTGTTTTGAGA CCGATAAGGAGGCAGGTCGCCAGGCTTGGGTGAATCCATGTCTCTGCCGA GGAACCAATAAGTGGGTGCACCAGAGCTGCATTTCCCTCTGGATCGACGA GAAGACCCGAATAAACAACAATCTGCAAGCCGTTTCCTGTCCACAATGCC AAACGGAGTACACCATTGCATACCCGAATCTCTGGATTTTCGATAGGGCT TTGGAGCTGACCAACGATCTTATCCTAACAAACTTATATAATTGCCTGGC CAATGTCTTCACTGTGGTCTTTGCCTATTGGTCAGCGGTTTCATTCGGAG CAAAAACATATTTGCAGATCACTGGTCAGGAAGGTCACGTTCATCAAATA ATTCAATCGGGAGACCTGTTGGTTGTTCTGGTCGGATTCCCATTAATCTC GGTAGTTCTGATACTTGGACGCTTAATTCCCTGGGAAGATGCCCTGTTGC GCTTCATTAGAATATGTTATTCATTGCTGCGAAGTCTTTCAATGATGTGC CTAGGACGGAAATATGACCACCAGACCGAACCATACCCTTCTGCACCAAT GACCGAATATTCGGCATCGCGGGTGGTCTGTGGAGCCATCCTCTTGCCCA CCATATCCATGTACGTGGGTAGAGTTCTTTACAGCTCTGTCGACGATAGA TTGCAACAAACTCTTCTTGGGGGATTGACTTTCATAGCGATCAAGGGATT CCTCAAAATGTACCTCATGCATAGCCAATACATCTGTCGTATGAAGCGTC GTGTTTTGGATTACACGAAGGAAAACCTAGCGGAGGCAGACGGACACTAG GTAAACTCAAGATCTGCAAGAGAAGCAAGAAGTAATTTGAATATCTATTT AAATTGTAAAGTGTACAATTTTCCTAAGACTACGTGTCAATAGTGCATTC TTACTACCAATCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17991-RA | 1070 | CG17991-RA | 1..1067 | 1..1067 | 5260 | 99.5 | Plus |
CG18766.a | 1692 | CG18766.a | 1635..1692 | 1067..1010 | 275 | 98.2 | Minus |
CG18766.c | 1790 | CG18766.c | 1733..1790 | 1067..1010 | 275 | 98.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 23064197..23065260 | 1..1064 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17991-RA | 1..885 | 66..950 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17991-RA | 1..885 | 66..950 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17991-RA | 1..885 | 66..950 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17991-RA | 1..885 | 66..950 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17991-RA | 1..885 | 66..950 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17991-RA | 1..1064 | 1..1064 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17991-RA | 1..1064 | 1..1064 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17991-RA | 1..1064 | 1..1064 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17991-RA | 1..1064 | 1..1064 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17991-RA | 1..1064 | 1..1064 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27241267..27242330 | 1..1064 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27241267..27242330 | 1..1064 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27241267..27242330 | 1..1064 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 23066989..23068052 | 1..1064 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26982098..26983161 | 1..1064 | 99 | Plus |
Translation from 65 to 949
> AT21004.pep MASNVAAPQASAGGDSTELERCCWICFETDKEAGRQAWVNPCLCRGTNKW VHQSCISLWIDEKTRINNNLQAVSCPQCQTEYTIAYPNLWIFDRALELTN DLILTNLYNCLANVFTVVFAYWSAVSFGAKTYLQITGQEGHVHQIIQSGD LLVVLVGFPLISVVLILGRLIPWEDALLRFIRICYSLLRSLSMMCLGRKY DHQTEPYPSAPMTEYSASRVVCGAILLPTISMYVGRVLYSSVDDRLQQTL LGGLTFIAIKGFLKMYLMHSQYICRMKRRVLDYTKENLAEADGH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16812-PA | 403 | GF16812-PA | 66..348 | 13..288 | 750 | 52.3 | Plus |
Dana\GF21788-PA | 469 | GF21788-PA | 62..350 | 9..288 | 569 | 41.1 | Plus |
Dana\GF20973-PA | 346 | GF20973-PA | 42..330 | 20..290 | 439 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11538-PA | 306 | GG11538-PA | 1..306 | 1..294 | 1060 | 65.7 | Plus |
Dere\GG11621-PA | 388 | GG11621-PA | 50..342 | 2..288 | 744 | 51.5 | Plus |
Dere\GG18582-PA | 384 | GG18582-PA | 32..332 | 2..288 | 538 | 37.3 | Plus |
Dere\GG17980-PA | 325 | GG17980-PA | 27..316 | 16..287 | 440 | 36.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14233-PA | 413 | GH14233-PA | 89..363 | 20..288 | 702 | 50.5 | Plus |
Dgri\GH12186-PA | 303 | GH12186-PA | 15..287 | 18..288 | 538 | 40.9 | Plus |
Dgri\GH24859-PA | 290 | GH24859-PA | 5..289 | 20..284 | 395 | 33.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17991-PA | 294 | CG17991-PA | 1..294 | 1..294 | 1563 | 100 | Plus |
CG9855-PC | 382 | CG9855-PC | 46..335 | 2..288 | 715 | 52.4 | Plus |
CG9855-PA | 382 | CG9855-PA | 46..335 | 2..288 | 715 | 52.4 | Plus |
CG16781-PA | 383 | CG16781-PA | 38..332 | 20..294 | 493 | 37.7 | Plus |
CG16781-PB | 386 | CG16781-PB | 41..335 | 20..294 | 493 | 37.7 | Plus |
CG10761-PA | 323 | CG10761-PA | 31..316 | 20..287 | 434 | 35.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22140-PA | 421 | GI22140-PA | 76..354 | 16..288 | 707 | 50.5 | Plus |
Dmoj\GI14409-PA | 305 | GI14409-PA | 10..301 | 15..291 | 441 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22354-PA | 389 | GL22354-PA | 72..346 | 13..288 | 714 | 51.8 | Plus |
Dper\GL20188-PA | 337 | GL20188-PA | 18..319 | 7..288 | 381 | 31.4 | Plus |
Dper\GL13124-PA | 345 | GL13124-PA | 22..266 | 11..288 | 369 | 34.8 | Plus |
Dper\GL13782-PA | 311 | GL13782-PA | 20..309 | 18..286 | 328 | 32.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22076-PB | 398 | GA22076-PB | 72..353 | 13..288 | 729 | 52.1 | Plus |
Dpse\GA23069-PA | 404 | GA23069-PA | 39..322 | 11..288 | 476 | 39.5 | Plus |
Dpse\GA10551-PA | 339 | GA10551-PA | 20..321 | 7..288 | 376 | 31.1 | Plus |
Dpse\GA26791-PA | 311 | GA26791-PA | 20..309 | 18..286 | 333 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10380-PA | 285 | GM10380-PA | 1..285 | 1..294 | 1105 | 74.3 | Plus |
Dsec\GM10705-PA | 382 | GM10705-PA | 57..335 | 15..288 | 738 | 52.3 | Plus |
Dsec\GM12725-PA | 388 | GM12725-PA | 34..326 | 16..292 | 492 | 36.2 | Plus |
Dsec\GM11202-PA | 325 | GM11202-PA | 17..316 | 1..287 | 434 | 34.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19682-PA | 382 | GD19682-PA | 57..335 | 15..288 | 730 | 52 | Plus |
Dsim\GD16331-PA | 388 | GD16331-PA | 34..326 | 16..292 | 526 | 37.8 | Plus |
Dsim\GD24575-PA | 320 | GD24575-PA | 17..316 | 1..287 | 429 | 34.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24258-PA | 420 | GJ24258-PA | 67..345 | 16..288 | 717 | 51.6 | Plus |
Dvir\GJ19393-PA | 367 | GJ19393-PA | 18..293 | 16..288 | 529 | 40.8 | Plus |
Dvir\GJ18757-PA | 307 | GJ18757-PA | 4..300 | 7..288 | 460 | 34.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13759-PA | 401 | GK13759-PA | 67..347 | 15..288 | 729 | 51.9 | Plus |
Dwil\GK10150-PA | 387 | GK10150-PA | 26..319 | 18..294 | 573 | 42 | Plus |
Dwil\GK10149-PA | 307 | GK10149-PA | 26..302 | 20..287 | 456 | 38 | Plus |
Dwil\GK19914-PA | 329 | GK19914-PA | 26..314 | 14..288 | 437 | 35.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25355-PA | 374 | GE25355-PA | 32..326 | 2..288 | 746 | 51.9 | Plus |
Dyak\GE16894-PA | 387 | GE16894-PA | 34..316 | 16..288 | 466 | 38.2 | Plus |
Dyak\GE17474-PA | 327 | GE17474-PA | 28..318 | 15..287 | 426 | 32.9 | Plus |
Translation from 65 to 949
> AT21004.hyp MASNVAAPQASAGGDSTELERCCWICFETDKEAGRQAWVNPCLCRGTNKW VHQSCISLWIDEKTRINNNLQAVSCPQCQTEYTIAYPNLWIFDRALELTN DLILTNLYNCLANVFTVVFAYWSAVSFGAKTYLQITGQEGHVHQIIQSGD LLVVLVGFPLISVVLILGRLIPWEDALLRFIRICYSLLRSLSMMCLGRKY DHQTEPYPSAPMTEYSASRVVCGAILLPTISMYVGRVLYSSVDDRLQQTL LGGLTFIAIKGFLKMYLMHSQYICRMKRRVLDYTKENLAEADGH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17991-PA | 294 | CG17991-PA | 1..294 | 1..294 | 1563 | 100 | Plus |
CG9855-PC | 382 | CG9855-PC | 46..335 | 2..288 | 715 | 52.4 | Plus |
CG9855-PA | 382 | CG9855-PA | 46..335 | 2..288 | 715 | 52.4 | Plus |
CG16781-PA | 383 | CG16781-PA | 38..332 | 20..294 | 493 | 37.7 | Plus |
CG16781-PB | 386 | CG16781-PB | 41..335 | 20..294 | 493 | 37.7 | Plus |