BDGP Sequence Production Resources |
Search the DGRC for AT21108
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 211 |
Well: | 8 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG13870-RB |
Protein status: | AT21108.pep: gold |
Preliminary Size: | 1812 |
Sequenced Size: | 1930 |
Gene | Date | Evidence |
---|---|---|
CG13870 | 2002-09-15 | Blastp of sequenced clone |
CG13870 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13870 | 2008-04-29 | Release 5.5 accounting |
CG13870 | 2008-08-15 | Release 5.9 accounting |
CG13870 | 2008-12-18 | 5.12 accounting |
1930 bp (1930 high quality bases) assembled on 2002-09-15
GenBank Submission: BT001337
> AT21108.complete CACAAAACTCGGTAAAGTTAATGTATATATTTAAGAAATAAAGTAGTACA GCAAACATGGAGAAGAGCACACTGAAGATCAATAATGAGGACCGGCAGAA TTTTGTGGCCACACGGATGAGTCTGCCGCTCTTTATGGTGTCCCGCAATC GTATTAGAAAGGAAAATTTACCGCGAGTGGAGAAGCAATTTAAGTTGGCC GAAAACAGACGAGAGGCCTTCAGCAAAGCCACCTTTGATCACTACCGCCA CATTACGGGTTTCGACAAGACGCCAAAGAATCCGTATCCGGAACGTCGAA GGCTACACATCGATCGGAGTATGACCAAATGGAGGGGCTGGCAACTGCCC CCAAATCATTACGGAGTGCCCCCGGAACCGTATCTCCGACTGAAGGGCAC CAAGGGCTCCGTATTCGCCAAGCCGCACACGAATCATAGTCGCGTCTCCA TTAAACCACCGCCATATCATTTTTACGAACTTCCGGCGGAAATCGAGAGG CTCTTCAAGCGCCCGAACTTGCAAAAGGGTATCTTCCTTTCAAATGCCCG CGATCGTCGACCGACCACACACGCCATGATTTCCAATCTGTCTGGCTGCT GGCGTAATCCCAAGGATGCCGGTCCCTGCGACACCCATACAAACATCTTT GAGTTGGCCGCAAATGCTGTACCCGTCACAAAGGCGCCACGCCCTAATCC GCACCTGTTTCTGCGCCACTCCTGTGTGCCCACCAAGCCCAATCGACTGA TCCGACGCCATATCAGCATGGAACCGGCTCCAGGTCGCTACTGCACCAGT TATCCGAATGTGTGTCCCTGTCCGTCTGGTAAGACCAGTGTGCCGGGACT ACAGCTGATGATTGATGACCAGAAGCGCCTGAAGTTTCGCCGCCTGCCAT TTGAAAGGATCAGTCGAAAGCGACTCTGTGAGCCGGATTGGCGCCATGTC GAGGGCCAAGGCCATCGTCATGTCTTCCTAATGGGACGCAAAGATAGACC CAAGCCCACCAAGAAACCCACTTCTTCCAAAAAGCAGGGCAAGCCGATAA GCATGTATGCCGATTCCAAGTACATTAACATGCTGAGCCAGCCGCAGCGA CATCCCATTTCCATTCGGGCGTATCCGGTTCCTCCGTACGTGCCCAAGAT CACCTACAACTGTGCAGCCAAGCGGGTGATCCGCAAGCAATTGAAGAACA ACAAGAAGATCGCCTTCAATAGTGGCCAGGAGCGATGGAAGGATGGCGAA CGACCGATGCAGCTGACCGCACGCCAACTGGAGGCCATCAAGCAGAAGCT ACCGCCGGAGAGGCGACTGATGGACTATCCCATTGAGCTGCCGGAGGTGA TTCCCAGTCGACTGACCCAGGTGCCCGATCACCAGAGGGTCACCTACATG CCCAAGTTGCGCAAGCGTCTGTTCAAGTTCCTGCCGATTCCCGGTGCTCG GGTCCTGGTCACCGACAGCGATATACGTCCGGACATTGTTTTCGATCCGG AGCACCCGACCGGACTGTACCGGCGCAAGATCGATGAGACCGCGTTCTAC AAGGACTCCGTGTTGCGGGCGATGGAGAATAAGGAGGGTTCAGATGCTAC CGGTTTGAACGAATCACAGTCGCAATCGCAGTCCCAATTGGATTCGCCCC ATCAGTCCATGATCCGAAACAATGGTAGCGCTGCGGATCCGTTGGAACCC AAGAGCGCTTCCCAGATATCATTCCATGAATAAAATGGCCAGCGGCTCTG CTCCACGTTCGTTCCCGTTTCGAATCCATTTCGTTTTTGATTTATGATCC ACGCTCCAGTGAATTCACGTGGCCACATGAAGCTAAGGCAAGAACTAAGT GTGATGGCCGAAGAAAATAAGCTAAAAAGTCCTAAATAAAGATGGGAAAA TTATTCACTTGGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 16231652..16233020 | 544..1912 | 6800 | 99.8 | Plus |
chr2R | 21145070 | chr2R | 16231197..16231539 | 201..543 | 1700 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 16230856..16231000 | 1..145 | 710 | 99.3 | Plus |
chr2R | 21145070 | chr2R | 16231058..16231114 | 145..201 | 285 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 20344650..20346022 | 544..1916 | 6865 | 100 | Plus |
2R | 25286936 | 2R | 20344195..20344537 | 201..543 | 1715 | 100 | Plus |
2R | 25286936 | 2R | 20343854..20343998 | 1..145 | 725 | 100 | Plus |
2R | 25286936 | 2R | 20344056..20344112 | 145..201 | 285 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 20345849..20347221 | 544..1916 | 6865 | 100 | Plus |
2R | 25260384 | 2R | 20345394..20345736 | 201..543 | 1715 | 100 | Plus |
2R | 25260384 | 2R | 20345053..20345197 | 1..145 | 725 | 100 | Plus |
2R | 25260384 | 2R | 20345255..20345311 | 145..201 | 285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 16230856..16230999 | 1..144 | 99 | -> | Plus |
chr2R | 16231058..16231114 | 145..201 | 100 | -> | Plus |
chr2R | 16231198..16231539 | 202..543 | 99 | -> | Plus |
chr2R | 16231652..16233020 | 544..1912 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13870-RB | 1..1677 | 57..1733 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13870-RB | 1..1677 | 57..1733 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13870-RB | 1..1677 | 57..1733 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13870-RB | 1..1677 | 57..1733 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13870-RB | 1..1677 | 57..1733 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13870-RB | 10..1782 | 1..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13870-RB | 10..1782 | 1..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13870-RB | 10..1921 | 1..1912 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13870-RB | 10..1782 | 1..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13870-RB | 10..1921 | 1..1912 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20343854..20343997 | 1..144 | 100 | -> | Plus |
2R | 20344056..20344112 | 145..201 | 100 | -> | Plus |
2R | 20344196..20344537 | 202..543 | 100 | -> | Plus |
2R | 20344650..20346018 | 544..1912 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20343854..20343997 | 1..144 | 100 | -> | Plus |
2R | 20344056..20344112 | 145..201 | 100 | -> | Plus |
2R | 20344196..20344537 | 202..543 | 100 | -> | Plus |
2R | 20344650..20346018 | 544..1912 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20343854..20343997 | 1..144 | 100 | -> | Plus |
2R | 20344056..20344112 | 145..201 | 100 | -> | Plus |
2R | 20344196..20344537 | 202..543 | 100 | -> | Plus |
2R | 20344650..20346018 | 544..1912 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 16231359..16231502 | 1..144 | 100 | -> | Plus |
arm_2R | 16231561..16231617 | 145..201 | 100 | -> | Plus |
arm_2R | 16231701..16232042 | 202..543 | 100 | -> | Plus |
arm_2R | 16232155..16233523 | 544..1912 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20345395..20345736 | 202..543 | 100 | -> | Plus |
2R | 20345849..20347217 | 544..1912 | 100 | Plus | |
2R | 20345053..20345196 | 1..144 | 100 | -> | Plus |
2R | 20345255..20345311 | 145..201 | 100 | -> | Plus |
Translation from 56 to 1732
> AT21108.pep MEKSTLKINNEDRQNFVATRMSLPLFMVSRNRIRKENLPRVEKQFKLAEN RREAFSKATFDHYRHITGFDKTPKNPYPERRRLHIDRSMTKWRGWQLPPN HYGVPPEPYLRLKGTKGSVFAKPHTNHSRVSIKPPPYHFYELPAEIERLF KRPNLQKGIFLSNARDRRPTTHAMISNLSGCWRNPKDAGPCDTHTNIFEL AANAVPVTKAPRPNPHLFLRHSCVPTKPNRLIRRHISMEPAPGRYCTSYP NVCPCPSGKTSVPGLQLMIDDQKRLKFRRLPFERISRKRLCEPDWRHVEG QGHRHVFLMGRKDRPKPTKKPTSSKKQGKPISMYADSKYINMLSQPQRHP ISIRAYPVPPYVPKITYNCAAKRVIRKQLKNNKKIAFNSGQERWKDGERP MQLTARQLEAIKQKLPPERRLMDYPIELPEVIPSRLTQVPDHQRVTYMPK LRKRLFKFLPIPGARVLVTDSDIRPDIVFDPEHPTGLYRRKIDETAFYKD SVLRAMENKEGSDATGLNESQSQSQSQLDSPHQSMIRNNGSAADPLEPKS ASQISFHE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12264-PA | 569 | GF12264-PA | 1..568 | 1..557 | 2198 | 75.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22031-PA | 566 | GG22031-PA | 1..566 | 1..558 | 2752 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20834-PA | 571 | GH20834-PA | 1..521 | 1..509 | 1700 | 62.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13870-PB | 558 | CG13870-PB | 1..558 | 1..558 | 2999 | 100 | Plus |
CG13870-PA | 568 | CG13870-PA | 1..568 | 1..558 | 2978 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20936-PA | 574 | GI20936-PA | 8..543 | 6..526 | 1622 | 59.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17661-PA | 632 | GL17661-PA | 1..570 | 1..555 | 1918 | 63.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12586-PA | 635 | GA12586-PA | 1..527 | 1..512 | 1927 | 67.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22013-PA | 566 | GM22013-PA | 1..566 | 1..558 | 2853 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11512-PA | 558 | GD11512-PA | 1..558 | 1..558 | 2868 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20661-PA | 581 | GJ20661-PA | 1..565 | 1..556 | 1741 | 60 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15978-PA | 621 | GK15978-PA | 3..513 | 2..510 | 1742 | 64 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12109-PA | 564 | GE12109-PA | 1..564 | 1..558 | 2752 | 91.5 | Plus |
Translation from 56 to 1732
> AT21108.hyp MEKSTLKINNEDRQNFVATRMSLPLFMVSRNRIRKENLPRVEKQFKLAEN RREAFSKATFDHYRHITGFDKTPKNPYPERRRLHIDRSMTKWRGWQLPPN HYGVPPEPYLRLKGTKGSVFAKPHTNHSRVSIKPPPYHFYELPAEIERLF KRPNLQKGIFLSNARDRRPTTHAMISNLSGCWRNPKDAGPCDTHTNIFEL AANAVPVTKAPRPNPHLFLRHSCVPTKPNRLIRRHISMEPAPGRYCTSYP NVCPCPSGKTSVPGLQLMIDDQKRLKFRRLPFERISRKRLCEPDWRHVEG QGHRHVFLMGRKDRPKPTKKPTSSKKQGKPISMYADSKYINMLSQPQRHP ISIRAYPVPPYVPKITYNCAAKRVIRKQLKNNKKIAFNSGQERWKDGERP MQLTARQLEAIKQKLPPERRLMDYPIELPEVIPSRLTQVPDHQRVTYMPK LRKRLFKFLPIPGARVLVTDSDIRPDIVFDPEHPTGLYRRKIDETAFYKD SVLRAMENKEGSDATGLNESQSQSQSQLDSPHQSMIRNNGSAADPLEPKS ASQISFHE*