AT21373.complete Sequence
1214 bp (1214 high quality bases) assembled on 2002-04-21
GenBank Submission: AY113288
> AT21373.complete
GTCACCACATGTTTTTGGCTTACACATATATATTCGTATATTAATAGGTC
TATTCAATCATTTGTATTTTTAACCCACGACATGGAGGACTCACAAAGGA
AACACGCCGGTTCCAAAGGATTTCGAGCTTTGGAAAATCGAAAACAAGAC
ATCGCCTACAATCACTATTTGAATTCGTTTGTCAAGCTGGAGGACAGACG
GTATCTACCCAACGATAATGTGATACATCAACTAGTCCCCCTGAGGGCAG
CAGTGGGAACAATCGTGATGACACCCACCCAGTTCAACGAGGTGCACTTC
TCTCCACTGGGAACGTGCTTCTATTTCAGCGAGAATAATGTCCCCAATGA
TCCACTGACTATGGCACTTCTAGAGCGCGAAAAGCTGAATGCAACTAAAA
CGATTTCATGCATTTACTCATAGACCATCGTATTCGTGAGCACCCGAGAT
TCCAAGGGCTTCAATATCTCCGGCTACATCGATTTGGAGCACAGTTTGCG
TAGATACAAGACCGCTGGATCGAAGTCTCATCCGTGGGCAGATATTTTCG
CCGGTCGCCGCCGCCTGGAGCCCAATCATCAGGATCTAAGCTTCATCAAT
TGGAGCAACGGCAGGGTGCATTCCAACGACTCGGATAACTACAAGGTTAT
TCCGGATGCCGTCAAGGGTTTGTGCTTCGCGCACAAGGGCGATGGTTCGA
TGCTCAGCATAGAGAAGTATATAACCGAAGAGCATCCGTTGTGCAAATTT
ATAGAATCGCCAAAACACGGCTCCACTGTCGTCTACGATCATTATATACG
GCGAAAGATGTGATTGCTGCCAGATCACATTATAATCGAAACATAAATTC
AGAATGCACTTCAACCGATCATCAAAGAGCTTTTACTGGCAATCAAAGCA
TTTTAGAAATCAAAACAATATCGTGATCATGAAACTGGCAGCCAGGGAGA
GGATAAACAATCGCCAGACTGACTGATGCCGCCGACGTCATGGACAAGCG
TCGCAGGGAAAATGCGCGAGAGCAAGTTGCGTATACGACGTGTGGTACTC
GGACTCTCCGCCGTGAACTGGAGAGAGCTTCCCATCGGCTGAGATGACAT
TCTTGGCCGTGCCAGTGAGTTCCGGCAGTCAGTAGGCGTGCGAAGCGCTC
CAAGACTGGGTGCTTCCGTTGCGTGAAAATAAATTGTGAAGAAGAAAAAA
AAAAAAAAAAAAAA
AT21373.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:14:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14017-RA | 1182 | CG14017-RA | 409..1182 | 424..1197 | 3855 | 99.8 | Plus |
CG14017-RB | 609 | CG14017-RB | 1..609 | 1..609 | 3045 | 100 | Plus |
CG14017-RA | 1182 | CG14017-RA | 1..408 | 1..408 | 2040 | 100 | Plus |
GluRIIA-RI | 3251 | GluRIIA-RI | 1..67 | 1131..1197 | 335 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:54:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 5553450..5554235 | 409..1194 | 3915 | 99.9 | Plus |
chr2L | 23010047 | chr2L | 5552995..5553402 | 1..408 | 2040 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:55:23 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:54:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5554352..5555140 | 409..1197 | 3930 | 99.9 | Plus |
2L | 23513712 | 2L | 5553897..5554304 | 1..408 | 2040 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:44:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5554352..5555140 | 409..1197 | 3930 | 99.8 | Plus |
2L | 23513712 | 2L | 5553897..5554304 | 1..408 | 2040 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-15 17:54:17 has no hits.
AT21373.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:55:14 Download gff for
AT21373.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 5552995..5553402 | 1..408 | 100 | -> | Plus |
chr2L | 5553450..5554235 | 409..1194 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:16:19 Download gff for
AT21373.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RA | 1..717 | 82..813 | 97 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:00:56 Download gff for
AT21373.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RA | 1..717 | 82..813 | 97 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:50:08 Download gff for
AT21373.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RA | 1..717 | 82..813 | 97 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:54:19 Download gff for
AT21373.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RA | 1..717 | 82..813 | 97 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:50:07 Download gff for
AT21373.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RA | 1..717 | 82..813 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:42:09 Download gff for
AT21373.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RA | 1..1179 | 1..1194 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:00:56 Download gff for
AT21373.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RA | 1..1179 | 1..1194 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:50:08 Download gff for
AT21373.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RA | 1..1179 | 1..1194 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:54:20 Download gff for
AT21373.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RA | 1..1179 | 1..1194 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:50:07 Download gff for
AT21373.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RA | 1..1179 | 1..1194 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:55:14 Download gff for
AT21373.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5553897..5554304 | 1..408 | 100 | -> | Plus |
2L | 5554352..5555137 | 409..1194 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:55:14 Download gff for
AT21373.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5553897..5554304 | 1..408 | 100 | -> | Plus |
2L | 5554352..5555137 | 409..1194 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:55:14 Download gff for
AT21373.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5553897..5554304 | 1..408 | 100 | -> | Plus |
2L | 5554352..5555137 | 409..1194 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:50:08 Download gff for
AT21373.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5553897..5554304 | 1..408 | 100 | -> | Plus |
arm_2L | 5554352..5555137 | 409..1194 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:26:28 Download gff for
AT21373.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5553897..5554304 | 1..408 | 100 | -> | Plus |
2L | 5554352..5555137 | 409..1194 | 99 | | Plus |
AT21373.hyp Sequence
Translation from 1 to 422
> AT21373.hyp
VTTCFWLTHIYSYINRSIQSFVFLTHDMEDSQRKHAGSKGFRALENRKQD
IAYNHYLNSFVKLEDRRYLPNDNVIHQLVPLRAAVGTIVMTPTQFNEVHF
SPLGTCFYFSENNVPNDPLTMALLEREKLNATKTISCIYS*
AT21373.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:09:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14017-PA | 238 | CG14017-PA | 1..111 | 28..138 | 574 | 99.1 | Plus |
AT21373.pep Sequence
Translation from 81 to 422
> AT21373.pep
MEDSQRKHAGSKGFRALENRKQDIAYNHYLNSFVKLEDRRYLPNDNVIHQ
LVPLRAAVGTIVMTPTQFNEVHFSPLGTCFYFSENNVPNDPLTMALLERE
KLNATKTISCIYS*
AT21373.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:50:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF15571-PA | 282 | GF15571-PA | 69..155 | 25..111 | 293 | 60.9 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:50:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG25082-PA | 245 | GG25082-PA | 1..118 | 1..111 | 409 | 67.8 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:17:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14017-PA | 238 | CG14017-PA | 1..111 | 1..111 | 574 | 99.1 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:50:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL26367-PA | 223 | GL26367-PA | 10..96 | 26..111 | 222 | 50.6 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:50:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA12701-PA | 223 | GA12701-PA | 10..96 | 26..111 | 222 | 50.6 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:50:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM18557-PA | 117 | GM18557-PA | 1..110 | 1..110 | 517 | 89.1 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:50:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD23351-PA | 238 | GD23351-PA | 1..111 | 1..111 | 523 | 89.2 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:50:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE25504-PA | 229 | GE25504-PA | 1..102 | 1..111 | 431 | 73.9 | Plus |