BDGP Sequence Production Resources |
Search the DGRC for AT21479
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 214 |
Well: | 79 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG6485-RA |
Protein status: | AT21479.pep: gold |
Preliminary Size: | 717 |
Sequenced Size: | 904 |
Gene | Date | Evidence |
---|---|---|
CG6485 | 2002-01-01 | Sim4 clustering to Release 2 |
CG6485 | 2002-01-18 | Blastp of sequenced clone |
CG6485 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6485 | 2008-04-29 | Release 5.5 accounting |
CG6485 | 2008-08-15 | Release 5.9 accounting |
CG6485 | 2008-12-18 | 5.12 accounting |
904 bp (904 high quality bases) assembled on 2002-01-18
GenBank Submission: AY089390
> AT21479.complete CCTCGTGCCGAATTCGGCACGAGGATTCAACGTTAGGCGAATCTCATATA CACAGGGTTAAGTACGTACATATACATATATTTATACCGCTATGCTGCGC TTGCTTCAGCCCATCCGCCGCATCCACCTGGCACCCGTTCTCCGTTTGGG AGCACCGGTGAATGCCACTGAAATACGCAAAGCACTGAAGTTCGAGTTCT CCAAGGATAACCAGCGGAGGGTGAAGGCCCTGCTCGCCTGGTATCCGCAG GCGGAGTGGAAGGGAGCACTCCTGCCACTACTGGATATTGCCCAGCGGCA GCAGGGATGGCTTTCGATCAGTGCCGTTCAGGCCGTGGCCGAGACCATCA AGATAGATCCAATGGAGGCCTTCGAGGCGGCGCAGTTCTACACCATGTTC TTCATGAAGCCGCGCGGGAAATATGTGGTCAGTGTGTGCACCTCGACGCC CTGCAAATTGCGTGGGGGCGACGAAATCTTTGAGGCGTGCAAGAAAACGC TCAATCTAGAGCACGGCCAGACCACGCCGGACATGCAGTTCACGCTCAAG GAGGATTACTGCATGGGCGCCTGTGTGAATGCCCCCGTTCTGGCGGTCAA CGATGACATGTACGAGGACCTGGACGAGAAGAGTCTGGCCAACATCCTGG CGGATCTGCGCAATGACAAGTTGCCGCCCGCTGGTCCGCGCAACGGTAGG TTTGCCAGTGAGCCCAAGGGTGGACTTACCACCCTAAAGATCCAGCCACC GCCGCCCGGCTTCATGATGCAGAAACTACCAGATCCGAAGACCAAGAAGT GTCAGTAGCCATTGATTAAGTCTTAAAGCAATAAATTCCGCCTGCCTTCG GGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6485-RA | 843 | CG6485-RA | 16..843 | 25..852 | 4110 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 17309404..17310231 | 852..25 | 4125 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 17319967..17320796 | 854..25 | 4120 | 99.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 17313067..17313896 | 854..25 | 4120 | 99.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 17309404..17310231 | 25..852 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6485-RA | 1..717 | 92..808 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6485-RA | 1..717 | 92..808 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6485-RA | 1..717 | 92..808 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6485-RA | 1..717 | 92..808 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6485-RA | 1..717 | 92..808 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6485-RA | 16..843 | 25..852 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6485-RA | 16..843 | 25..852 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6485-RA | 16..843 | 25..852 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6485-RA | 16..843 | 25..852 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6485-RA | 16..843 | 25..852 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17319969..17320796 | 25..852 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17319969..17320796 | 25..852 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17319969..17320796 | 25..852 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 17313069..17313896 | 25..852 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17313069..17313896 | 25..852 | 99 | Minus |
Translation from 91 to 807
> AT21479.pep MLRLLQPIRRIHLAPVLRLGAPVNATEIRKALKFEFSKDNQRRVKALLAW YPQAEWKGALLPLLDIAQRQQGWLSISAVQAVAETIKIDPMEAFEAAQFY TMFFMKPRGKYVVSVCTSTPCKLRGGDEIFEACKKTLNLEHGQTTPDMQF TLKEDYCMGACVNAPVLAVNDDMYEDLDEKSLANILADLRNDKLPPAGPR NGRFASEPKGGLTTLKIQPPPPGFMMQKLPDPKTKKCQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24324-PA | 236 | GF24324-PA | 1..236 | 1..233 | 913 | 69.1 | Plus |
Dana\GF22392-PA | 242 | GF22392-PA | 44..239 | 32..227 | 614 | 57.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15826-PA | 238 | GG15826-PA | 1..238 | 1..238 | 1160 | 91.2 | Plus |
Dere\GG19123-PA | 242 | GG19123-PA | 44..239 | 32..227 | 609 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14917-PA | 248 | GH14917-PA | 7..248 | 3..237 | 651 | 51 | Plus |
Dgri\GH24933-PA | 242 | GH24933-PA | 39..239 | 27..227 | 611 | 54.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ND-24L-PA | 238 | CG6485-PA | 1..238 | 1..238 | 1254 | 100 | Plus |
ND-24-PB | 242 | CG5703-PB | 44..239 | 32..227 | 600 | 55.6 | Plus |
ND-24-PA | 242 | CG5703-PA | 44..239 | 32..227 | 600 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12897-PA | 246 | GI12897-PA | 5..246 | 1..237 | 651 | 51 | Plus |
Dmoj\GI14890-PA | 242 | GI14890-PA | 46..239 | 34..227 | 605 | 56.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20163-PA | 264 | GL20163-PA | 46..240 | 34..228 | 597 | 54.4 | Plus |
Dper\GL15498-PA | 190 | GL15498-PA | 27..173 | 17..163 | 512 | 62.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19629-PA | 245 | GA19629-PA | 14..245 | 3..235 | 747 | 59.7 | Plus |
Dpse\GA19069-PA | 264 | GA19069-PA | 44..240 | 32..228 | 596 | 53.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24346-PA | 241 | GM24346-PA | 1..241 | 1..238 | 1219 | 95.9 | Plus |
Dsec\GM13517-PA | 242 | GM13517-PA | 44..239 | 32..227 | 610 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12420-PA | 238 | GD12420-PA | 1..238 | 1..238 | 1234 | 97.1 | Plus |
Dsim\GD15675-PA | 242 | GD15675-PA | 44..239 | 32..227 | 610 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13038-PA | 247 | GJ13038-PA | 5..247 | 1..237 | 676 | 53.9 | Plus |
Dvir\GJ15322-PA | 129 | GJ15322-PA | 1..126 | 102..227 | 397 | 57.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25091-PA | 242 | GK25091-PA | 46..239 | 34..227 | 613 | 56.7 | Plus |
Translation from 91 to 807
> AT21479.hyp MLRLLQPIRRIHLAPVLRLGAPVNATEIRKALKFEFSKDNQRRVKALLAW YPQAEWKGALLPLLDIAQRQQGWLSISAVQAVAETIKIDPMEAFEAAQFY TMFFMKPRGKYVVSVCTSTPCKLRGGDEIFEACKKTLNLEHGQTTPDMQF TLKEDYCMGACVNAPVLAVNDDMYEDLDEKSLANILADLRNDKLPPAGPR NGRFASEPKGGLTTLKIQPPPPGFMMQKLPDPKTKKCQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6485-PA | 238 | CG6485-PA | 1..238 | 1..238 | 1254 | 100 | Plus |
CG5703-PB | 242 | CG5703-PB | 44..239 | 32..227 | 600 | 55.6 | Plus |
CG5703-PA | 242 | CG5703-PA | 44..239 | 32..227 | 600 | 55.6 | Plus |