BDGP Sequence Production Resources |
Search the DGRC for AT21490
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 214 |
Well: | 90 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG6497-RA |
Protein status: | AT21490.pep: gold |
Preliminary Size: | 837 |
Sequenced Size: | 1265 |
Gene | Date | Evidence |
---|---|---|
CG6497 | 2002-01-01 | Sim4 clustering to Release 2 |
CG6497 | 2002-05-18 | Blastp of sequenced clone |
CG6497 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6497 | 2008-04-29 | Release 5.5 accounting |
CG6497 | 2008-08-15 | Release 5.9 accounting |
CG6497 | 2008-12-18 | 5.12 accounting |
1265 bp (1265 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118703
> AT21490.complete GGAACATAAGTACCAAAATTAACCGAAACGAAAATTCAAACCCAGTCGGA CTCATCCCCTACCAGCCAGGAACCATACACCGAAAAAAGAAGGAACCAAA GGACACAGGACATAATGGAGCTGTGGCAGAAGCTACGAGTGCAGTTTAAT GACTTCTTCCACGCGAACTACCCGTACATAGCGCTCTACAGCGGACTGGG CGTGGCAGTAACAGCCTACTTGCACTACCAATGGAGCGTGCACCACTACG ACCTCATGTACTGGAAGCGTTTGGCGGAGGTCTTCTCGCAGGACATCGAC TGCATCCAGCTGGCTATACTGCTCTTGATCTTCGCGATCAACGCCATTTT CGTATTCATCATCCTGAGCGTCTATCTGCGCCCAGCCCTCGACAATGGCA GTGAGATGTCCTTGCTGGAGATCAAGGATCGCTATGCCCGGTTCATACTG CTCCGCCTGATAGCCCGTCTCGATCGCATACAGTCGAAGATCTCAGCGAA GCGTAAGAGCCTCACCTTCCAGCACTATGTGAGGGCACACACGAACATGG TAAAGGCGGTGGCCGTGTTCCGCAAGGATGCACGCAAGCTAATCCTGCCG AATGAGAGCGAGATCCTGATGCCCATCGAGGACATCTACGGGGTGGCTGA TGACGAAGAACGACTGCTTCGGCGATCGGGCTACTACAAGCTGATCATCG ACACCACCGACGAGACGGTCAAGTCTCTGTTCAACGCCAAGCTGGAGGAG ATCCTGTTCCCAACCAGCTAGACGACTCGGCGGTTCCGATTGAAACTTTG AGTAAACTGCAGTCCAACACTAATTGCCTTTATCTACTCTGCCAGAGCCG CAGCTCCGAGGGCCCCTTCTTAAAGCCGTTTTATTGTTTCAATTGTTTGG CTTGCCAGCTTTTTATGGCCGCATTGTGCGCCGGGCCAACAATAACAGGC CAGTCGGAGACTGTCAGCCGTCCCCAACCCCCAATAACAATAATGGCAAA AGAAACAGCAGCAGAAACAGCAGCAGAAACAGAAGCAGAAGCAGTTGCAG AACCAGACCAGAACTAGAAACAAAACTCCAACCAGGAACAGAGACTAAAC TAAAATGCCAGCCCATGTCTGCACAGCTCAAAACAATATCTAATGTTGTC TACGGCAAAATATTTTGCAAAGCGTCTTTTTGTTTTGCCCGATTTCTGTG TCCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6497-RA | 1277 | CG6497-RA | 67..1273 | 1..1207 | 6005 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 17242171..17243376 | 1206..1 | 6000 | 99.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 17252731..17253937 | 1207..1 | 6005 | 99.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 17245831..17247037 | 1207..1 | 6005 | 99.8 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 17242396..17243376 | 1..981 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6497-RA | 1..657 | 115..771 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6497-RA | 1..657 | 115..771 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6497-RA | 1..657 | 115..771 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6497-RA | 1..657 | 115..771 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6497-RA | 1..657 | 115..771 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6497-RA | 67..1272 | 1..1206 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6497-RA | 67..1272 | 1..1206 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6497-RA | 1..1206 | 1..1206 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6497-RA | 67..1272 | 1..1206 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6497-RA | 1..1206 | 1..1206 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17252732..17253937 | 1..1206 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17252732..17253937 | 1..1206 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17252732..17253937 | 1..1206 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 17245832..17247037 | 1..1206 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17245832..17247037 | 1..1206 | 99 | Minus |
Translation from 114 to 770
> AT21490.pep MELWQKLRVQFNDFFHANYPYIALYSGLGVAVTAYLHYQWSVHHYDLMYW KRLAEVFSQDIDCIQLAILLLIFAINAIFVFIILSVYLRPALDNGSEMSL LEIKDRYARFILLRLIARLDRIQSKISAKRKSLTFQHYVRAHTNMVKAVA VFRKDARKLILPNESEILMPIEDIYGVADDEERLLRRSGYYKLIIDTTDE TVKSLFNAKLEEILFPTS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24325-PA | 209 | GF24325-PA | 1..209 | 1..209 | 931 | 82.8 | Plus |
Dana\GF24323-PA | 207 | GF24323-PA | 6..207 | 2..199 | 160 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15827-PA | 218 | GG15827-PA | 1..218 | 1..218 | 1100 | 95 | Plus |
Dere\GG15825-PA | 203 | GG15825-PA | 18..184 | 18..190 | 153 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15304-PA | 211 | GH15304-PA | 1..210 | 1..208 | 622 | 62.4 | Plus |
Dgri\GH16584-PA | 194 | GH16584-PA | 14..174 | 22..194 | 145 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6497-PB | 218 | CG6497-PB | 1..218 | 1..218 | 1108 | 100 | Plus |
CG6497-PA | 218 | CG6497-PA | 1..218 | 1..218 | 1108 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12898-PA | 210 | GI12898-PA | 1..210 | 1..209 | 689 | 66.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15499-PA | 384 | GL15499-PA | 194..384 | 20..209 | 658 | 64.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19639-PA | 210 | GA19639-PA | 1..210 | 1..209 | 697 | 62.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24347-PA | 218 | GM24347-PA | 1..218 | 1..218 | 1133 | 98.6 | Plus |
Dsec\GM24345-PA | 198 | GM24345-PA | 55..179 | 64..190 | 138 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12421-PA | 218 | GD12421-PA | 1..218 | 1..218 | 1132 | 98.2 | Plus |
Dsim\GD12419-PA | 189 | GD12419-PA | 55..179 | 64..190 | 145 | 29.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13039-PA | 210 | GJ13039-PA | 1..210 | 1..209 | 688 | 66.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20350-PA | 210 | GK20350-PA | 6..210 | 5..209 | 799 | 72.7 | Plus |
Dwil\GK20348-PA | 204 | GK20348-PA | 9..195 | 9..202 | 159 | 23.9 | Plus |
Dwil\GK19175-PA | 214 | GK19175-PA | 32..213 | 30..218 | 145 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22167-PA | 218 | GE22167-PA | 1..218 | 1..218 | 1080 | 92.7 | Plus |
Translation from 114 to 770
> AT21490.hyp MELWQKLRVQFNDFFHANYPYIALYSGLGVAVTAYLHYQWSVHHYDLMYW KRLAEVFSQDIDCIQLAILLLIFAINAIFVFIILSVYLRPALDNGSEMSL LEIKDRYARFILLRLIARLDRIQSKISAKRKSLTFQHYVRAHTNMVKAVA VFRKDARKLILPNESEILMPIEDIYGVADDEERLLRRSGYYKLIIDTTDE TVKSLFNAKLEEILFPTS*