BDGP Sequence Production Resources |
Search the DGRC for AT21555
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 215 |
Well: | 55 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG3814-RB |
Protein status: | AT21555.pep: gold |
Preliminary Size: | 919 |
Sequenced Size: | 1052 |
Gene | Date | Evidence |
---|---|---|
CG3814 | 2002-01-01 | Sim4 clustering to Release 2 |
CG3814 | 2002-01-09 | Blastp of sequenced clone |
CG3814 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3814 | 2008-04-29 | Release 5.5 accounting |
CG3814 | 2008-08-15 | Release 5.9 accounting |
CG3814 | 2008-12-18 | 5.12 accounting |
1052 bp (1052 high quality bases) assembled on 2002-01-09
GenBank Submission: AY075250
> AT21555.complete CTCCAGACCATTATCGTCTGCATTTTTGCTTTATCATTGCTTAAGTTAAC TTTGTTATCTGCACCACCACAGAAAGAAGTCCGGGTGTTTTAATTTCGGG TTGGCCCCATATCATGCGTTTGACCCGGCCACCTGTTCAGTAGTTCGTGT GAATTCCAGCAGGGCGTAGCTATAAAATGTATCACTACCAGCAAGGCGAT GAAACTGGCGCATACACAGATGCGGAAGCGGACAAGAGCTTCGCCTTCGA TGACCAGAGCATCCGGAAGGGATTTATTCGAAAGGTCTACTTGATATTGA TGTGCCAATTGCTGATCACTTTCGGTTTTGTTAGCGTATTTACGTTCTCG AAAGCTTCGCAGGAATGGGTGCAAAAAAATCCGGCACTGTTTTGGATAGC CTTGGCCGTTCTTATCGTGACCATGATCTGTATGGCCTGCTGCGAAAGTG TACGCCGTAAGACGCCTCTTAACTTCATCTTTCTTTTCCTGTTCACCGTG GCGGAGTCGTTCCTTCTGGGTATGGTCGCCGGACAGTTTGAGGCTGATGA GGTCCTGATGGCAGTGGGAATTACGGCCGCGGTGGCCCTGGGACTCACCC TGTTTGCCCTGCAGACCAAATACGATTTTACGATGTGCGGAGGAGTGTTG GTGGCCTGTCTGGTGGTCTTCATCATTTTTGGCATAATCGCTATCTTCAT CCCAGGCAAGGTGATCGGACTGGTCTATGCCTCCTTGGGAGCATTGCTCT TCTCCGTTTACTTGGTGTACGATACCCAGTTGATGCTGGGTGGTAATCAT AAGTACTCCATCAGTCCTGAGGAATACATCTTCGCCGCTCTAAACCTCTA CCTGGACATTATTAACATCTTCATGTACATACTGACCATTATCGGATTGT CTCGCAATTAGACTGGTCATTATGATCAATAGCTTCTATTCCAGTTTTAG AAATGTAACTTAATTTTATGTGCCCAGTGCCACCTTAGCCGGAAAGAAAT ACAAGACGACTAACTAATCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3814-RB | 1142 | CG3814-RB | 30..1051 | 1..1022 | 5050 | 99.6 | Plus |
CG3814-RA | 1347 | CG3814-RA | 406..1209 | 219..1022 | 3960 | 99.5 | Plus |
CG3814-RA | 1347 | CG3814-RA | 1..195 | 1..195 | 975 | 100 | Plus |
Nmda1.a | 1668 | Nmda1.a | 812..988 | 719..895 | 375 | 80.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 8762463..8763079 | 1020..404 | 3085 | 100 | Minus |
chr2R | 21145070 | chr2R | 8764070..8764265 | 196..1 | 980 | 100 | Minus |
chr2R | 21145070 | chr2R | 8763400..8763508 | 302..194 | 545 | 100 | Minus |
chr2R | 21145070 | chr2R | 8763140..8763243 | 405..302 | 520 | 100 | Minus |
chr2R | 21145070 | chr2R | 8764970..8765315 | 895..550 | 395 | 74.3 | Minus |
chr3R | 27901430 | chr3R | 9977843..9977997 | 880..726 | 295 | 79.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 12875162..12875780 | 1022..404 | 3035 | 99.4 | Minus |
2R | 25286936 | 2R | 12876771..12876966 | 196..1 | 980 | 100 | Minus |
2R | 25286936 | 2R | 12876101..12876209 | 302..194 | 545 | 100 | Minus |
2R | 25286936 | 2R | 12875841..12875944 | 405..302 | 520 | 100 | Minus |
2R | 25286936 | 2R | 12877671..12878016 | 895..550 | 395 | 74.3 | Minus |
3R | 32079331 | 3R | 14152993..14153147 | 880..726 | 295 | 79.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 12876361..12876979 | 1022..404 | 3035 | 99.3 | Minus |
2R | 25260384 | 2R | 12877970..12878165 | 196..1 | 980 | 100 | Minus |
2R | 25260384 | 2R | 12877300..12877408 | 302..194 | 545 | 100 | Minus |
2R | 25260384 | 2R | 12877040..12877143 | 405..302 | 520 | 100 | Minus |
2R | 25260384 | 2R | 12878870..12879046 | 895..719 | 375 | 80.7 | Minus |
3R | 31820162 | 3R | 13893824..13893978 | 880..726 | 295 | 79.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 8762463..8763078 | 405..1020 | 100 | <- | Minus |
chr2R | 8763141..8763242 | 303..404 | 100 | <- | Minus |
chr2R | 8763400..8763506 | 196..302 | 100 | <- | Minus |
chr2R | 8764071..8764265 | 1..195 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3814-RB | 1..735 | 177..911 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3814-RB | 1..735 | 177..911 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3814-RB | 1..735 | 177..911 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3814-RB | 1..735 | 177..911 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3814-RB | 1..735 | 177..911 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3814-RB | 1..1020 | 1..1020 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3814-RB | 1..1020 | 1..1020 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3814-RB | 1..1020 | 1..1020 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3814-RB | 1..1020 | 1..1020 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3814-RB | 1..1020 | 1..1020 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12876101..12876207 | 196..302 | 100 | <- | Minus |
2R | 12875164..12875779 | 405..1020 | 99 | <- | Minus |
2R | 12875842..12875943 | 303..404 | 100 | <- | Minus |
2R | 12876772..12876966 | 1..195 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12876101..12876207 | 196..302 | 100 | <- | Minus |
2R | 12875164..12875779 | 405..1020 | 99 | <- | Minus |
2R | 12875842..12875943 | 303..404 | 100 | <- | Minus |
2R | 12876772..12876966 | 1..195 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12876101..12876207 | 196..302 | 100 | <- | Minus |
2R | 12875164..12875779 | 405..1020 | 99 | <- | Minus |
2R | 12875842..12875943 | 303..404 | 100 | <- | Minus |
2R | 12876772..12876966 | 1..195 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 8762669..8763284 | 405..1020 | 99 | <- | Minus |
arm_2R | 8763347..8763448 | 303..404 | 100 | <- | Minus |
arm_2R | 8763606..8763712 | 196..302 | 100 | <- | Minus |
arm_2R | 8764277..8764471 | 1..195 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12876363..12876978 | 405..1020 | 99 | <- | Minus |
2R | 12877041..12877142 | 303..404 | 100 | <- | Minus |
2R | 12877300..12877406 | 196..302 | 100 | <- | Minus |
2R | 12877971..12878165 | 1..195 | 100 | Minus |
Translation from 176 to 910
> AT21555.pep MYHYQQGDETGAYTDAEADKSFAFDDQSIRKGFIRKVYLILMCQLLITFG FVSVFTFSKASQEWVQKNPALFWIALAVLIVTMICMACCESVRRKTPLNF IFLFLFTVAESFLLGMVAGQFEADEVLMAVGITAAVALGLTLFALQTKYD FTMCGGVLVACLVVFIIFGIIAIFIPGKVIGLVYASLGALLFSVYLVYDT QLMLGGNHKYSISPEEYIFAALNLYLDIINIFMYILTIIGLSRN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11999-PA | 247 | GF11999-PA | 6..247 | 3..244 | 1190 | 93.4 | Plus |
Dana\GF11997-PA | 323 | GF11997-PA | 89..323 | 11..244 | 892 | 73.6 | Plus |
Dana\GF18785-PA | 255 | GF18785-PA | 5..253 | 3..242 | 649 | 51.4 | Plus |
Dana\GF13645-PA | 255 | GF13645-PA | 30..251 | 18..239 | 491 | 45 | Plus |
Dana\GF15315-PA | 226 | GF15315-PA | 25..222 | 45..241 | 326 | 36.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22543-PA | 244 | GG22543-PA | 1..244 | 1..244 | 1262 | 99.2 | Plus |
Dere\GG22542-PA | 324 | GG22542-PA | 90..324 | 11..244 | 875 | 70.2 | Plus |
Dere\GG21447-PA | 264 | GG21447-PA | 32..261 | 14..240 | 629 | 50 | Plus |
Dere\GG23314-PA | 274 | GG23314-PA | 31..270 | 3..239 | 417 | 37.5 | Plus |
Dere\GG24567-PA | 221 | GG24567-PA | 23..218 | 44..241 | 239 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20517-PA | 246 | GH20517-PA | 5..246 | 3..244 | 1066 | 88.4 | Plus |
Dgri\GH20515-PA | 331 | GH20515-PA | 97..331 | 11..244 | 924 | 75.7 | Plus |
Dgri\GH19695-PA | 263 | GH19695-PA | 30..263 | 11..244 | 774 | 61.1 | Plus |
Dgri\GH23740-PA | 263 | GH23740-PA | 30..263 | 11..244 | 761 | 60.3 | Plus |
Dgri\GH21302-PA | 289 | GH21302-PA | 61..287 | 14..240 | 596 | 49.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Lfg-PB | 244 | CG3814-PB | 1..244 | 1..244 | 1238 | 100 | Plus |
Lfg-PD | 239 | CG3814-PD | 10..239 | 15..244 | 1157 | 100 | Plus |
Lfg-PA | 239 | CG3814-PA | 10..239 | 15..244 | 1157 | 100 | Plus |
Lfg-PC | 203 | CG3814-PC | 1..203 | 42..244 | 1023 | 100 | Plus |
Nmda1-PH | 313 | CG3798-PH | 79..313 | 11..244 | 877 | 71.5 | Plus |
Nmda1-PG | 313 | CG3798-PG | 79..313 | 11..244 | 877 | 71.5 | Plus |
Nmda1-PA | 313 | CG3798-PA | 79..313 | 11..244 | 877 | 71.5 | Plus |
Nmda1-PB | 313 | CG3798-PB | 79..313 | 11..244 | 877 | 71.5 | Plus |
Nmda1-PI | 316 | CG3798-PI | 82..316 | 11..244 | 877 | 71.5 | Plus |
Nmda1-PF | 316 | CG3798-PF | 82..316 | 11..244 | 877 | 71.5 | Plus |
Nmda1-PE | 324 | CG3798-PE | 90..324 | 11..244 | 877 | 71.5 | Plus |
Nmda1-PC | 324 | CG3798-PC | 90..324 | 11..244 | 877 | 71.5 | Plus |
Nmda1-PD | 324 | CG3798-PD | 90..324 | 11..244 | 877 | 71.5 | Plus |
CG9722-PA | 264 | CG9722-PA | 38..261 | 17..240 | 653 | 54.9 | Plus |
CG30379-PB | 295 | CG30379-PB | 72..291 | 20..239 | 454 | 37.7 | Plus |
CG33673-PB | 235 | CG33673-PB | 16..232 | 24..241 | 346 | 33.8 | Plus |
CG34430-PA | 264 | CG34430-PA | 30..232 | 20..228 | 198 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21062-PA | 244 | GI21062-PA | 1..244 | 1..244 | 1154 | 88.1 | Plus |
Dmoj\GI21061-PA | 324 | GI21061-PA | 90..324 | 11..244 | 890 | 72.3 | Plus |
Dmoj\GI24550-PA | 263 | GI24550-PA | 32..263 | 14..244 | 786 | 62.1 | Plus |
Dmoj\GI19790-PA | 285 | GI19790-PA | 57..279 | 15..236 | 550 | 50.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17451-PA | 245 | GL17451-PA | 4..245 | 3..244 | 1096 | 90.9 | Plus |
Dper\GL17450-PA | 319 | GL17450-PA | 85..319 | 11..244 | 903 | 71.9 | Plus |
Dper\GL23305-PA | 282 | GL23305-PA | 26..252 | 4..236 | 668 | 59.2 | Plus |
Dper\GL11699-PA | 304 | GL11699-PA | 77..300 | 16..239 | 534 | 46.4 | Plus |
Dper\GL18462-PA | 223 | GL18462-PA | 22..214 | 43..235 | 338 | 38.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17704-PA | 245 | GA17704-PA | 4..245 | 3..244 | 1101 | 91.3 | Plus |
Dpse\GA17704-PB | 237 | GA17704-PB | 8..237 | 15..244 | 1039 | 91.7 | Plus |
Dpse\GA17693-PC | 308 | GA17693-PC | 74..308 | 11..244 | 903 | 71.9 | Plus |
Dpse\GA17693-PB | 310 | GA17693-PB | 76..310 | 11..244 | 903 | 71.9 | Plus |
Dpse\GA17693-PA | 319 | GA17693-PA | 85..319 | 11..244 | 903 | 71.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20328-PA | 244 | GM20328-PA | 1..244 | 1..244 | 1261 | 99.2 | Plus |
Dsec\GM20327-PA | 324 | GM20327-PA | 90..324 | 11..244 | 890 | 71.5 | Plus |
Dsec\GM25879-PA | 264 | GM25879-PA | 38..263 | 17..242 | 640 | 54 | Plus |
Dsec\GM20992-PA | 243 | GM20992-PA | 41..239 | 9..239 | 377 | 33.8 | Plus |
Dsec\GM16580-PA | 222 | GM16580-PA | 24..219 | 40..241 | 250 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25805-PA | 244 | GD25805-PA | 1..244 | 1..244 | 1261 | 99.2 | Plus |
Dsim\GD25804-PA | 324 | GD25804-PA | 90..324 | 11..244 | 893 | 71.5 | Plus |
Dsim\GD20449-PA | 262 | GD20449-PA | 36..261 | 17..242 | 643 | 54.4 | Plus |
Dsim\GD10521-PA | 284 | GD10521-PA | 50..280 | 9..239 | 433 | 36.4 | Plus |
Dsim\GD10520-PA | 275 | GD10520-PA | 41..271 | 9..239 | 427 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21986-PA | 244 | GJ21986-PA | 1..244 | 1..244 | 1172 | 90.2 | Plus |
Dvir\GJ21985-PA | 333 | GJ21985-PA | 96..333 | 8..244 | 883 | 71.4 | Plus |
Dvir\GJ22617-PA | 262 | GJ22617-PA | 15..262 | 4..244 | 855 | 64.5 | Plus |
Dvir\GJ15114-PA | 302 | GJ15114-PA | 72..299 | 10..238 | 578 | 49.8 | Plus |
Dvir\GJ22864-PA | 199 | GJ22864-PA | 9..196 | 53..241 | 311 | 41.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20879-PA | 244 | GK20879-PA | 1..244 | 1..244 | 1111 | 85.2 | Plus |
Dwil\GK20878-PA | 323 | GK20878-PA | 89..323 | 11..244 | 902 | 71.5 | Plus |
Dwil\GK19213-PA | 271 | GK19213-PA | 42..271 | 14..243 | 740 | 60 | Plus |
Dwil\GK21973-PA | 299 | GK21973-PA | 69..297 | 10..240 | 590 | 49.4 | Plus |
Dwil\GK20410-PA | 176 | GK20410-PA | 9..173 | 53..217 | 225 | 31.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13413-PA | 244 | GE13413-PA | 1..244 | 1..244 | 1266 | 99.6 | Plus |
Dyak\GE13412-PA | 324 | GE13412-PA | 90..324 | 11..244 | 880 | 70.2 | Plus |
Dyak\GE10054-PA | 264 | GE10054-PA | 38..263 | 17..242 | 669 | 56.2 | Plus |
Dyak\GE19159-PA | 242 | GE19159-PA | 36..238 | 5..239 | 388 | 34.5 | Plus |
Dyak\GE15302-PA | 223 | GE15302-PA | 23..219 | 44..241 | 263 | 33.7 | Plus |
Translation from 176 to 910
> AT21555.hyp MYHYQQGDETGAYTDAEADKSFAFDDQSIRKGFIRKVYLILMCQLLITFG FVSVFTFSKASQEWVQKNPALFWIALAVLIVTMICMACCESVRRKTPLNF IFLFLFTVAESFLLGMVAGQFEADEVLMAVGITAAVALGLTLFALQTKYD FTMCGGVLVACLVVFIIFGIIAIFIPGKVIGLVYASLGALLFSVYLVYDT QLMLGGNHKYSISPEEYIFAALNLYLDIINIFMYILTIIGLSRN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3814-PB | 244 | CG3814-PB | 1..244 | 1..244 | 1238 | 100 | Plus |
CG3814-PD | 239 | CG3814-PD | 10..239 | 15..244 | 1157 | 100 | Plus |
CG3814-PA | 239 | CG3814-PA | 10..239 | 15..244 | 1157 | 100 | Plus |
CG3814-PC | 203 | CG3814-PC | 1..203 | 42..244 | 1023 | 100 | Plus |
Nmda1-PH | 313 | CG3798-PH | 79..313 | 11..244 | 877 | 71.5 | Plus |