Clone AT21585 Report

Search the DGRC for AT21585

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:215
Well:85
Vector:pOTB7
Associated Gene/TranscriptCG3568-RA
Protein status:AT21585.pep: gold
Preliminary Size:1412
Sequenced Size:1717

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3568 2002-01-01 Sim4 clustering to Release 2
CG3568 2002-04-21 Blastp of sequenced clone
CG3568 2003-01-01 Sim4 clustering to Release 3
CG3568 2008-04-29 Release 5.5 accounting
CG3568 2008-08-15 Release 5.9 accounting
CG3568 2008-12-18 5.12 accounting

Clone Sequence Records

AT21585.complete Sequence

1717 bp (1717 high quality bases) assembled on 2002-04-21

GenBank Submission: AY113290

> AT21585.complete
GACATATATTCCTATCAGCGGCGAACTTTTTTGTCCGGACTCCTAAAAGT
GACTCCAAAAAGTGCGATGAGATCTTTTCTTTATATGCTCTCCCAACGTC
CCAAATTGGCATGTTTGTGCGGAAAATCTATTATCATATGGCCTGGTAAA
CGTACAAATCTGCCGGAAAATGCTTTCACTCAGCGGATGCTTCAAGAATG
TGGCCAAATGGCAAAGCCGGACGCTTCGGTGGATCTCGATAATTTCAAAG
CTATTTCGGAGCAGTCTCCCGCCGAGTTTGGCATCGATTCCTGCCGAGTG
AAGGCACAGCCGGAAGATCGAAGTGACCGCATACGGGAACAAATCGCATC
CGCCTATCCGGTGATTCACGAACGGACCCTCCTACTCTTTATCAGCTTCT
TAGAGCACAAGCTCACGTTCGGCAGCGAGCAGGAGAAGGCCATCTACAAG
GACATGACTGTGGTTGACCTTGTGCAGCGCCTGCTGGCGAAGAGATGTGT
GTGGTTCTTTGGCGCTAACGACTATTACCGTACAATGCAGGGAAATATTG
GTAACGAGGGCTTCGAGGCAGTGGGTACGCCCGCCGAAAAGGAACCCCTC
ACTTTGACCTCGGTGCTCAGCTACGACGAGATCAAGCTGTCCGCCCTGCT
CTACGTGTCCTGCCACTCGGAGTTCATTAACAATGGCAGTAGGGTCAATG
GGGGTGAGGTGCTGCAGAATAAGGACACTATCGAACGGGAGGGCGTTGTG
ATTGGACTAATTGGAGCTCGTTTCGAGCGTCCCGATGTGATGGAGTACCA
GGATATCATGATTACTAAAACCCAAAATACTGAGGCCAATGGCTACGGTT
TCGATTTGGAACAGATATCCAGCGAGACGGTCACACCTGCATCAGATTTG
CGCAGAATCTGGCGCGAGTTCTACGAGGAGCCCAGGGACTTCATTTACGC
CGACACTCCGTATGATACTACGCGTTTCGAAGAGGTTTCTCAGGGCATCT
TCGATCACCAGGTAATGCGCAAGCGATATGCCATCAGTTTCGACACCCTG
CTCTTGGAGGCACAGGACAGAGCATTTAAGGCTGGTAAGCCCGCCTATAT
CCATGTGGTCGGCATCGGACTGGGCGTTTGGAAGGCAGCTAGACAGCAGG
AGCGCACCTTCCTTGAATCTTTTGAGGGACGATTGCGGGCACTTGGAGAA
CGACTAAGCCACATCGGAGTGGTACACTTCTCATGGTTTCATTTGGCATG
TGTGGGCAGCTTGCATGACGGAGCCATCATTCCCGTGGACAAACATCCCC
AGGGTGGCATTCGCATTCGCAATTCGGTCCGAAATCCCGGAGACAAACTA
ACGGAGGACATGTTGCCCGTGGTGACATACGCCTGGGATGGAAATGCCCT
GCCTGGCAACGAATTTTGGGCGAATATGCTAATCAGCACTGGGGATCCAG
CAGCAGCCTGTTCCACTTTAATCTCTGAACTCCAAAATCCCCACATTAAT
GTGCACTATATGAACGGAGCCAATCTGCACATTGCATCAGTGGAACACGG
ACTACTCCATGTAGGCGACTACGCTAGGCGACTGATTGTGTAAACACAAT
GTATCTAAGCACTATGTAATCCTTAAAATATATTACAATAAAGAGATCAG
CTTTTTTGCTGATACATATGTACATATGTACATATGTACATATGAAAAAA
AAAAAAAAAAAAAAAAA

AT21585.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:14:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG3568-RA 1780 CG3568-RA 41..1736 1..1696 8480 100 Plus
CG2909-RA 2103 CG2909-RA 1191..1253 1099..1161 180 85.7 Plus
CG3568-RA 1780 CG3568-RA 1711..1744 1663..1696 155 97 Plus
CG2909-RA 2103 CG2909-RA 711..772 613..674 145 82.2 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 12:01:45
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 4436052..4437053 421..1422 5010 100 Plus
chrX 22417052 chrX 4435514..4435789 1..276 1380 100 Plus
chrX 22417052 chrX 4437110..4437382 1422..1694 1365 100 Plus
chrX 22417052 chrX 4435853..4436000 275..422 740 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:55:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 12:01:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4543175..4544176 421..1422 5010 100 Plus
X 23542271 X 4542637..4542912 1..276 1380 100 Plus
X 23542271 X 4544233..4544507 1422..1696 1375 100 Plus
X 23542271 X 4542976..4543123 275..422 740 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:44:54
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 4551273..4552274 421..1422 5010 100 Plus
X 23527363 X 4550735..4551010 1..276 1380 100 Plus
X 23527363 X 4552331..4552605 1422..1696 1375 100 Plus
X 23527363 X 4551074..4551221 275..422 740 100 Plus
X 23527363 X 10335835..10335897 1099..1161 180 85.7 Plus
X 23527363 X 4552580..4552613 1663..1696 155 97 Plus
X 23527363 X 10335355..10335416 613..674 145 82.2 Plus
Blast to na_te.dros performed 2019-03-16 12:01:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\INE-1 1467 Dbuz\INE-1 ISBU1 1467bp 610..705 1594..1689 128 63.3 Plus
Dbuz\INE-1 1467 Dbuz\INE-1 ISBU1 1467bp 682..727 1693..1644 114 76 Minus

AT21585.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 12:02:42 Download gff for AT21585.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 4435514..4435789 1..276 100 -> Plus
chrX 4435855..4435999 277..421 100 -> Plus
chrX 4436053..4437053 422..1422 100 -> Plus
chrX 4437111..4437382 1423..1694 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:16:41 Download gff for AT21585.complete
Subject Subject Range Query Range Percent Splice Strand
CG3568-RA 1..1527 67..1593 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:00:59 Download gff for AT21585.complete
Subject Subject Range Query Range Percent Splice Strand
CG3568-RA 1..1527 67..1593 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 12:57:38 Download gff for AT21585.complete
Subject Subject Range Query Range Percent Splice Strand
CG3568-RA 1..1527 67..1593 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:54:22 Download gff for AT21585.complete
Subject Subject Range Query Range Percent Splice Strand
CG3568-RA 1..1527 67..1593 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:34:40 Download gff for AT21585.complete
Subject Subject Range Query Range Percent Splice Strand
CG3568-RA 1..1527 67..1593 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:42:14 Download gff for AT21585.complete
Subject Subject Range Query Range Percent Splice Strand
CG3568-RA 1..1694 1..1694 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:00:58 Download gff for AT21585.complete
Subject Subject Range Query Range Percent Splice Strand
CG3568-RA 8..1693 1..1686 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:57:38 Download gff for AT21585.complete
Subject Subject Range Query Range Percent Splice Strand
CG3568-RA 8..1693 1..1686 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:54:22 Download gff for AT21585.complete
Subject Subject Range Query Range Percent Splice Strand
CG3568-RA 1..1694 1..1694 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:34:40 Download gff for AT21585.complete
Subject Subject Range Query Range Percent Splice Strand
CG3568-RA 8..1693 1..1686 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:02:42 Download gff for AT21585.complete
Subject Subject Range Query Range Percent Splice Strand
X 4542637..4542912 1..276 100 -> Plus
X 4542978..4543122 277..421 100 -> Plus
X 4543176..4544176 422..1422 100 -> Plus
X 4544234..4544505 1423..1694 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:02:42 Download gff for AT21585.complete
Subject Subject Range Query Range Percent Splice Strand
X 4542637..4542912 1..276 100 -> Plus
X 4542978..4543122 277..421 100 -> Plus
X 4543176..4544176 422..1422 100 -> Plus
X 4544234..4544505 1423..1694 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:02:42 Download gff for AT21585.complete
Subject Subject Range Query Range Percent Splice Strand
X 4542637..4542912 1..276 100 -> Plus
X 4542978..4543122 277..421 100 -> Plus
X 4543176..4544176 422..1422 100 -> Plus
X 4544234..4544505 1423..1694 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:57:38 Download gff for AT21585.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 4436670..4436945 1..276 100 -> Plus
arm_X 4437011..4437155 277..421 100 -> Plus
arm_X 4437209..4438209 422..1422 100 -> Plus
arm_X 4438267..4438538 1423..1694 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:26:31 Download gff for AT21585.complete
Subject Subject Range Query Range Percent Splice Strand
X 4550735..4551010 1..276 100 -> Plus
X 4551076..4551220 277..421 100 -> Plus
X 4551274..4552274 422..1422 100 -> Plus
X 4552332..4552603 1423..1694 100   Plus

AT21585.hyp Sequence

Translation from 1 to 1592

> AT21585.hyp
DIYSYQRRTFLSGLLKVTPKSAMRSFLYMLSQRPKLACLCGKSIIIWPGK
RTNLPENAFTQRMLQECGQMAKPDASVDLDNFKAISEQSPAEFGIDSCRV
KAQPEDRSDRIREQIASAYPVIHERTLLLFISFLEHKLTFGSEQEKAIYK
DMTVVDLVQRLLAKRCVWFFGANDYYRTMQGNIGNEGFEAVGTPAEKEPL
TLTSVLSYDEIKLSALLYVSCHSEFINNGSRVNGGEVLQNKDTIEREGVV
IGLIGARFERPDVMEYQDIMITKTQNTEANGYGFDLEQISSETVTPASDL
RRIWREFYEEPRDFIYADTPYDTTRFEEVSQGIFDHQVMRKRYAISFDTL
LLEAQDRAFKAGKPAYIHVVGIGLGVWKAARQQERTFLESFEGRLRALGE
RLSHIGVVHFSWFHLACVGSLHDGAIIPVDKHPQGGIRIRNSVRNPGDKL
TEDMLPVVTYAWDGNALPGNEFWANMLISTGDPAAACSTLISELQNPHIN
VHYMNGANLHIASVEHGLLHVGDYARRLIV*

AT21585.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:09:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG3568-PA 508 CG3568-PA 1..508 23..530 2664 100 Plus
CG2909-PA 505 CG2909-PA 11..498 46..529 1277 51.8 Plus

AT21585.pep Sequence

Translation from 66 to 1592

> AT21585.pep
MRSFLYMLSQRPKLACLCGKSIIIWPGKRTNLPENAFTQRMLQECGQMAK
PDASVDLDNFKAISEQSPAEFGIDSCRVKAQPEDRSDRIREQIASAYPVI
HERTLLLFISFLEHKLTFGSEQEKAIYKDMTVVDLVQRLLAKRCVWFFGA
NDYYRTMQGNIGNEGFEAVGTPAEKEPLTLTSVLSYDEIKLSALLYVSCH
SEFINNGSRVNGGEVLQNKDTIEREGVVIGLIGARFERPDVMEYQDIMIT
KTQNTEANGYGFDLEQISSETVTPASDLRRIWREFYEEPRDFIYADTPYD
TTRFEEVSQGIFDHQVMRKRYAISFDTLLLEAQDRAFKAGKPAYIHVVGI
GLGVWKAARQQERTFLESFEGRLRALGERLSHIGVVHFSWFHLACVGSLH
DGAIIPVDKHPQGGIRIRNSVRNPGDKLTEDMLPVVTYAWDGNALPGNEF
WANMLISTGDPAAACSTLISELQNPHINVHYMNGANLHIASVEHGLLHVG
DYARRLIV*

AT21585.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:51:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19356-PA 507 GF19356-PA 36..502 37..506 1583 64.3 Plus
Dana\GF19418-PA 503 GF19418-PA 11..499 24..507 1283 51.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:51:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18711-PA 516 GG18711-PA 11..515 1..507 2296 82.8 Plus
Dere\GG18351-PA 504 GG18351-PA 11..498 24..507 1331 52.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:51:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12722-PA 501 GH12722-PA 16..501 25..508 1508 59 Plus
Dgri\GH12012-PA 504 GH12012-PA 11..501 24..508 1419 56 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:45:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG3568-PA 508 CG3568-PA 1..508 1..508 2664 100 Plus
CG2909-PA 505 CG2909-PA 11..498 24..507 1277 51.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:51:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15399-PA 501 GI15399-PA 9..493 24..507 1474 58.2 Plus
Dmoj\GI15192-PA 504 GI15192-PA 11..499 24..507 1395 54.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:51:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19969-PA 492 GL19969-PA 1..486 14..506 1727 65.7 Plus
Dper\GL26843-PA 509 GL26843-PA 11..498 24..507 1373 54.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:51:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28591-PA 492 GA28591-PA 1..486 14..506 1709 66.5 Plus
Dpse\GA15510-PA 509 GA15510-PA 25..498 37..507 1376 55.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:51:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12349-PA 508 GM12349-PA 1..507 1..507 2378 85.8 Plus
Dsec\GM11417-PA 504 GM11417-PA 11..498 24..507 1291 50.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:51:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16694-PA 508 GD16694-PA 1..507 1..507 2368 85.6 Plus
Dsim\GD24700-PA 450 GD24700-PA 11..440 24..503 1034 44.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:51:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14797-PA 489 GJ14797-PA 5..486 25..507 1499 59.9 Plus
Dvir\GJ14799-PA 504 GJ14799-PA 11..500 24..507 1387 54 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:51:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14526-PA 489 GK14526-PA 8..483 25..506 1561 61.9 Plus
Dwil\GK10210-PA 516 GK10210-PA 11..500 24..507 1376 53.6 Plus
Dwil\GK16988-PA 484 GK16988-PA 1..477 24..506 1370 54.4 Plus
Dwil\GK25024-PA 503 GK25024-PA 25..500 35..507 1307 51.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:51:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16350-PA 493 GE16350-PA 1..493 14..508 2188 81 Plus
Dyak\GE17840-PA 504 GE17840-PA 11..498 24..507 1325 51.8 Plus