Clone AT21693 Report

Search the DGRC for AT21693

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:216
Well:93
Vector:pOTB7
Associated Gene/TranscriptCG2127-RA
Protein status:AT21693.pep: gold
Preliminary Size:1436
Sequenced Size:1731

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG2127 2002-01-01 Sim4 clustering to Release 2
CG2127 2002-01-09 Blastp of sequenced clone
CG2127 2003-01-01 Sim4 clustering to Release 3
CG2127 2008-04-29 Release 5.5 accounting
CG2127 2008-08-15 Release 5.9 accounting
CG2127 2008-12-18 5.12 accounting

Clone Sequence Records

AT21693.complete Sequence

1731 bp (1731 high quality bases) assembled on 2002-01-09

GenBank Submission: AY075252

> AT21693.complete
CCCACTCCGAGCTGAGGATGTCGGGTTTTAGTTAGTCTACACTCAGTCCT
TGGCCTAACATAACATATTTTCGACTATTTTCGGCTTTGTAAAACAAAAT
TTGGTAAAAAGGTTCAATATGTTGCGAATGTTGCGTCAGAAATGTCGTTC
CCTCGTAGATCGGAGCATGCCGTGCCTGGAGTCTTTGGTAAATGCCTGTT
CTCTATTCAAGGTCGATTGGTCCAAGAATCTGAGCCAAATCAAAACCCCG
GCCGACTGCGTTGGCTCCAGTGTGCTCCGGCAGCACCTGTTACGCCGCAA
CTACAGCAGTCAGTCTTCCGCCGATGATTGCGGGCGGCCAAAGGATTGCG
ATCAGGTATCGACCTCCAAGGGCTGTGGTCCTGCTCGGTTCAAGGGCACC
ATTTGCGATGCAGTCAAGGGCGGTAAGCGCAAGAAGAAGGAAGAGCCCAA
GAAGGAAAAGTCCAACAAGCCAAAGCTGCCAGCAAAGATGAGGTCCATGT
GGTATATACCCGACTGCGAGTACGTGCCAAAGTGCGATGTGCCAGTGCGG
TACGACATCCAGCACTACCGCATATCGGACAAAGAGGCCCGCCAGTACCA
GGTGACGTGGAACGAGTGCCCCCGGTTGGTGATCAAGCCCAAGAAGGTGT
GCATCCACGCAAAGCGACCGCGTCCGAAGCCCTGCCGCCGTCAGCGGAAG
ACGGTGGTGGCCACAGCCCGTCCCACGATGCCCATGCTTAATCCCATGGA
GTGCAAGAAGGCAGAGGACTCCTCACCCTGTCCGCGCTGGACTCTTCCCT
GCTGCAAGCCCGCCCGTATTCCGCCCAGTTGCCACCGAGAACGCCGACCT
ACCGACTGTACCAAGCGCCCGGCGCCGTATCCCAGCTTCTCAGAATGCAA
GCGGGAGGAGCTCACTAACGCACCACCTACAGAGTGCCTATGCCTTCGAG
TTCCCATGGCCTGCGAGATGTGGGCGGAGCTGAGGCGAAGGATCGCCCGT
GGCAAGGGGGCAGTCCTTAAGTGTGGCGAAACGTAGGCGGCGGCGAAAGC
ACAGTCATTCGACATCTGGCCACAACATTCCGGTCACTTTTCCAACTCAC
AATCCACCAAAATTACAGTTTTCCAAAATAGCCAATTCATTCCATTCGCA
CTCCACAATCCACAATCCACAATCCACACTTTCCAAATTCAAAATGCTGT
TAAAACGCTGCGGGAAAACCCTAATGCCAGTCGTCGTCCGATTGGCCAGC
TGTGCCAGCTCCAAGGGCGGCACCTCGGACTCCAAGTGCAACTCCAATTC
GAAGGATAAATGCAAGCCGGAGCCCAGCTGCAAGCGCTCCGCGAAGAGGA
AGAACTGCTCCAAGGTCCCAACACCATTCCCGAGCTACTCGGAGTGCAAG
CGAAAACAGACTGACCCTAAACCTTCCAAGGAGTGCGATTGCTGGGACTT
TGACAAGTGCTGATCCCCGGCAATTTGGATACCGGAGCTCCGGGGATGTC
TCTCGCTTATGGCCCTCCCACATTTTCATTCCATAAGACTGAGGACTCTG
TACTCATAATCCCGTTGGTGGCACTGGGAGCCTAGGTGTTTTGTCCATGT
CCAACCTTTGCAGTTATCCTGGACGCCTATTATAAAGCTTTAATCCACGT
CAAACTGACCGACGTTGAACGAAATACAAGAACTAAAAAAGTTTCAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

AT21693.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:32:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG2127-RA 1697 CG2127-RA 1..1697 1..1697 8455 99.8 Plus
CG2127-RB 1650 CG2127-RB 109..1648 158..1697 7670 99.8 Plus
CG2127.a 1532 CG2127.a 589..1532 754..1697 4705 99.8 Plus
CG2127.a 1532 CG2127.a 1..596 52..647 2965 99.8 Plus
CG2127-RB 1650 CG2127-RB 7..109 1..103 515 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:39:37
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 4255870..4257564 1695..1 8445 99.9 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:55:44 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:39:35
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8368342..8370038 1697..1 8455 99.9 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:00:33
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 8369541..8371237 1697..1 8455 99.8 Minus
Blast to na_te.dros performed on 2019-03-15 17:39:35 has no hits.

AT21693.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:40:34 Download gff for AT21693.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 4255870..4257564 1..1695 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:16:47 Download gff for AT21693.complete
Subject Subject Range Query Range Percent Splice Strand
CG2127-RA 1..918 119..1036 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:53:35 Download gff for AT21693.complete
Subject Subject Range Query Range Percent Splice Strand
CG2127-RA 1..918 119..1036 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:42:42 Download gff for AT21693.complete
Subject Subject Range Query Range Percent Splice Strand
CG2127-RA 1..918 119..1036 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:18:55 Download gff for AT21693.complete
Subject Subject Range Query Range Percent Splice Strand
CG2127-RA 1..918 119..1036 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:43:35 Download gff for AT21693.complete
Subject Subject Range Query Range Percent Splice Strand
CG2127-RA 1..918 119..1036 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:17:02 Download gff for AT21693.complete
Subject Subject Range Query Range Percent Splice Strand
CG2127-RA 1..1695 1..1695 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:53:35 Download gff for AT21693.complete
Subject Subject Range Query Range Percent Splice Strand
CG2127-RA 1..1695 1..1695 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:42:42 Download gff for AT21693.complete
Subject Subject Range Query Range Percent Splice Strand
CG2127-RA 1..1695 1..1695 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:18:56 Download gff for AT21693.complete
Subject Subject Range Query Range Percent Splice Strand
CG2127-RA 1..1695 1..1695 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:43:35 Download gff for AT21693.complete
Subject Subject Range Query Range Percent Splice Strand
CG2127-RA 1..1695 1..1695 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:40:34 Download gff for AT21693.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8368344..8370038 1..1695 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:40:34 Download gff for AT21693.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8368344..8370038 1..1695 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:40:34 Download gff for AT21693.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8368344..8370038 1..1695 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:42:42 Download gff for AT21693.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4255849..4257543 1..1695 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:53:12 Download gff for AT21693.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8369543..8371237 1..1695 99   Minus

AT21693.pep Sequence

Translation from 118 to 1035

> AT21693.pep
MLRMLRQKCRSLVDRSMPCLESLVNACSLFKVDWSKNLSQIKTPADCVGS
SVLRQHLLRRNYSSQSSADDCGRPKDCDQVSTSKGCGPARFKGTICDAVK
GGKRKKKEEPKKEKSNKPKLPAKMRSMWYIPDCEYVPKCDVPVRYDIQHY
RISDKEARQYQVTWNECPRLVIKPKKVCIHAKRPRPKPCRRQRKTVVATA
RPTMPMLNPMECKKAEDSSPCPRWTLPCCKPARIPPSCHRERRPTDCTKR
PAPYPSFSECKREELTNAPPTECLCLRVPMACEMWAELRRRIARGKGAVL
KCGET*

AT21693.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 02:27:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12592-PA 303 GF12592-PA 1..302 1..304 886 61.2 Plus
Dana\GF20746-PA 237 GF20746-PA 2..233 38..296 273 32.6 Plus
Dana\GF12596-PA 309 GF12596-PA 128..293 127..295 229 40.8 Plus
Dana\GF14894-PA 253 GF14894-PA 101..248 146..291 224 38.7 Plus
Dana\GF12352-PA 229 GF12352-PA 76..215 145..291 203 46.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 02:27:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10647-PA 303 GG10647-PA 1..302 1..304 1244 89.8 Plus
Dere\GG11285-PA 232 GG11285-PA 66..227 123..291 278 44.1 Plus
Dere\GG23352-PA 244 GG23352-PA 93..229 145..290 269 46.6 Plus
Dere\GG10654-PA 291 GG10654-PA 66..268 82..283 205 35.2 Plus
Dere\GG25129-PA 248 GG25129-PA 100..248 146..293 199 39 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 02:27:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20817-PA 240 GH20817-PA 73..240 126..305 368 48.9 Plus
Dgri\GH18815-PA 169 GH18815-PA 6..162 126..291 252 42.5 Plus
Dgri\GH20816-PA 242 GH20816-PA 89..238 145..302 227 39.6 Plus
Dgri\GH19654-PA 242 GH19654-PA 89..238 145..302 227 39.6 Plus
Dgri\GH20818-PA 177 GH20818-PA 20..175 140..291 202 38.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:22:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG2127-PA 305 CG2127-PA 1..305 1..305 1688 100 Plus
CG2127-PB 289 CG2127-PB 1..289 17..305 1609 100 Plus
CG33340-PA 229 CG33340-PA 23..224 80..291 338 38 Plus
CG8701-PA 246 CG8701-PA 36..231 74..290 338 42.5 Plus
CG12860-PA 316 CG12860-PA 66..304 59..292 274 31 Plus
hubl-PB 291 CG30364-PB 66..268 67..283 258 33.6 Plus
hubl-PA 291 CG30364-PA 66..268 67..283 258 33.6 Plus
CG4691-PA 262 CG4691-PA 114..260 146..291 252 39.5 Plus
cola-PA 259 CG30363-PA 95..228 143..285 239 38.5 Plus
CG12861-PA 239 CG12861-PA 74..237 132..291 230 36 Plus
boly-PA 255 CG30362-PA 45..253 105..291 222 30.7 Plus
swif-PB 284 CG30366-PB 75..279 78..291 207 33.3 Plus
swif-PA 284 CG30366-PA 75..279 78..291 207 33.3 Plus
CG11635-PA 286 CG11635-PA 4..229 50..283 204 31.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 02:28:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20912-PA 250 GI20912-PA 74..250 124..305 351 45.7 Plus
Dmoj\GI20909-PA 248 GI20909-PA 92..244 145..302 275 45.3 Plus
Dmoj\GI10075-PA 236 GI10075-PA 57..232 111..294 263 41.6 Plus
Dmoj\GI20915-PA 272 GI20915-PA 115..270 140..291 245 39.9 Plus
Dmoj\GI18687-PA 297 GI18687-PA 120..289 126..296 183 37.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 02:28:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10866-PA 259 GL10866-PA 31..259 65..305 491 49.2 Plus
Dper\GL11217-PA 243 GL11217-PA 91..235 144..298 234 40.6 Plus
Dper\GL21858-PA 176 GL21858-PA 15..176 126..296 222 43 Plus
Dper\GL10869-PA 261 GL10869-PA 110..259 146..291 193 38.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 02:28:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15259-PA 259 GA15259-PA 31..259 65..305 495 49.6 Plus
Dpse\GA21267-PA 243 GA21267-PA 91..235 144..298 234 40.6 Plus
Dpse\GA26429-PA 176 GA26429-PA 15..176 126..296 221 43 Plus
Dpse\GA11864-PA 216 GA11864-PA 55..213 139..292 201 38.1 Plus
Dpse\GA15789-PA 261 GA15789-PA 110..259 146..291 186 37.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 02:28:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20692-PA 305 GM20692-PA 1..304 1..304 1433 95.7 Plus
Dsec\GM26593-PA 232 GM26593-PA 26..232 80..296 266 37.6 Plus
Dsec\GM21027-PA 246 GM21027-PA 93..231 145..290 218 47.6 Plus
Dsec\GM20696-PA 259 GM20696-PA 95..228 143..285 186 38.5 Plus
Dsec\GM20699-PA 291 GM20699-PA 105..268 111..283 183 36.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 02:28:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15275-PA 305 GD15275-PA 1..304 1..304 1529 96.4 Plus
Dsim\GD21095-PA 232 GD21095-PA 6..227 62..291 267 37.8 Plus
Dsim\GD15279-PA 259 GD15279-PA 95..228 143..285 186 38.5 Plus
Dsim\GD15282-PA 291 GD15282-PA 105..268 111..283 183 36.4 Plus
Dsim\GD15283-PA 291 GD15283-PA 105..268 111..283 183 36.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 02:28:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20641-PA 249 GJ20641-PA 47..249 93..305 371 42.9 Plus
Dvir\GJ20639-PA 249 GJ20639-PA 96..248 145..305 270 42.3 Plus
Dvir\GJ23810-PA 238 GJ23810-PA 68..234 122..294 257 40.8 Plus
Dvir\GJ21704-PA 303 GJ21704-PA 74..283 75..285 218 34.8 Plus
Dvir\GJ20644-PA 206 GJ20644-PA 50..204 140..291 204 39.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 02:28:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15825-PA 289 GK15825-PA 57..288 67..304 544 50.8 Plus
Dwil\GK19110-PA 237 GK19110-PA 2..235 46..296 307 39.4 Plus
Dwil\GK15752-PA 216 GK15752-PA 66..215 145..304 256 41.9 Plus
Dwil\GK15759-PA 265 GK15759-PA 97..244 139..296 228 39.6 Plus
Dwil\GK15761-PA 301 GK15761-PA 120..279 121..283 220 44 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 02:28:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23064-PA 307 GE23064-PA 1..306 1..304 1334 89.3 Plus
Dyak\GE19192-PA 245 GE19192-PA 93..231 145..290 276 49 Plus
Dyak\GE23478-PA 232 GE23478-PA 65..232 122..296 264 41.5 Plus
Dyak\GE23134-PA 291 GE23134-PA 66..268 67..283 181 34.4 Plus
Dyak\GE19047-PA 239 GE19047-PA 91..239 146..293 179 38.6 Plus

AT21693.hyp Sequence

Translation from 118 to 1035

> AT21693.hyp
MLRMLRQKCRSLVDRSMPCLESLVNACSLFKVDWSKNLSQIKTPADCVGS
SVLRQHLLRRNYSSQSSADDCGRPKDCDQVSTSKGCGPARFKGTICDAVK
GGKRKKKEEPKKEKSNKPKLPAKMRSMWYIPDCEYVPKCDVPVRYDIQHY
RISDKEARQYQVTWNECPRLVIKPKKVCIHAKRPRPKPCRRQRKTVVATA
RPTMPMLNPMECKKAEDSSPCPRWTLPCCKPARIPPSCHRERRPTDCTKR
PAPYPSFSECKREELTNAPPTECLCLRVPMACEMWAELRRRIARGKGAVL
KCGET*

AT21693.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:09:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG2127-PA 305 CG2127-PA 1..305 1..305 1688 100 Plus
CG2127-PB 289 CG2127-PB 1..289 17..305 1609 100 Plus
CG33340-PA 229 CG33340-PA 23..224 80..291 338 38 Plus
CG8701-PA 246 CG8701-PA 36..231 74..290 338 42.5 Plus
CG12860-PA 316 CG12860-PA 66..304 59..292 274 31 Plus