BDGP Sequence Production Resources |
Search the DGRC for AT21872
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 218 |
Well: | 72 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG17717-RA |
Protein status: | AT21872.pep: gold |
Sequenced Size: | 1087 |
Gene | Date | Evidence |
---|---|---|
CG17717-RA | 2010-11-11 | Gleaning Pick By Joe Carlson |
1087 bp assembled on 2010-12-06
GenBank Submission: BT125808.1
> AT21872.complete ATGTTGCAGAGAAATTCGGTGTAAAAATTTGTTTTCTCAAAATTTGTTTT GTAACGCTCACAAGTGGACAAACGCCACCAACCGCCGCCAAGCAGTTGTC AATATCATTGCAAGCAGTGCAGGCGCACCACACAATAGCCGTTGCTTACC CGCAACAACATCTGTGTACCCGAGCAATATGTCGCATCATCAACACGTTC TTTCCGAGGCCGCTGCCCTTCGTCTGATTAACGGTCTGGAGTCAGCCGGC AATGCCACAATGCCACTCGGCGCTCAGCCGCCTCAGTCAGCGGCAGCTGA AGCAATCTGCTCGTCGCAAATCGTAGCATCGGCACATGGCACGCCCACTG CATCCACGGCAGCACTGGAAATATCCTCAGCACGACAACGGATGCTGCGA AGTCACCTACAGGAGAGCCTCCATTCGGCGAACGAAAGCGGCAACTCGTG CCGCATCTGCCGCTGGAACCGCAACGACATGGAGATCATCAAATGTCCCT GCAACTGCAAGGGCAGCGTGGGCTACATCCACCTAAAGTGCTTGAAGCGC TGGATCATGCACAGGCGGGATAATCGCTGTGAGATCTGCAATGCGGTCTT TAATATCGCGGAGGAGCGGGCCAGTCTGAAGCAAATGATCCGAACCTTCT GCTGCGGCCGTTGTTGCGGCCTGATTGTGAAGCATCTGCTATTTAGCGCC TCGCTAATGCCACTAGCCCATATCATCTTGCAGCAGGTGCTGCAGTGCAT GGATAATATGAATCAAGGCAGCACCGATCAGTTAACCGTCCAGGAGGTGT TTGTCGCCTCTTGTGCCCTTCTGACCTCCAGTGCACTTTTCTTCCACTTC TTTGAGTTTGTCACCACACGATTTATGCTCATCCGGAACATTCTCAGCCA CTGGTGGATGTTTGGCAGCACCTCCGATTTTGAGCTGGTGGAGATTGAGG ATGATTCCATCGATTTTTTCGATGATTAGCCGATAATATGGACTGATATA AAAATGATGATAATGGAAGGCAGAGCAGCATTCATGTTTACAGTTAAATA AATTATTTTATTATTTCATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 6481598..6482118 | 1..521 | 2605 | 100 | Plus |
chrX | 22417052 | chrX | 6482595..6482930 | 734..1069 | 1665 | 99.7 | Plus |
chrX | 22417052 | chrX | 6482316..6482535 | 520..739 | 1100 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 6481598..6482117 | 1..520 | 100 | -> | Plus |
chrX | 6482317..6482532 | 521..736 | 100 | -> | Plus |
chrX | 6482598..6482930 | 737..1069 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17717-RA | 1..801 | 179..979 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17717-RA | 1..801 | 179..979 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17717-RA | 1..801 | 179..979 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17717-RA | 24..1092 | 1..1069 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17717-RA | 24..1092 | 1..1069 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17717-RA | 24..1092 | 1..1069 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6589313..6589832 | 1..520 | 99 | -> | Plus |
X | 6590033..6590248 | 521..736 | 100 | -> | Plus |
X | 6590314..6590646 | 737..1069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6589313..6589832 | 1..520 | 99 | -> | Plus |
X | 6590033..6590248 | 521..736 | 100 | -> | Plus |
X | 6590314..6590646 | 737..1069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6589313..6589832 | 1..520 | 99 | -> | Plus |
X | 6590033..6590248 | 521..736 | 100 | -> | Plus |
X | 6590314..6590646 | 737..1069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 6483346..6483865 | 1..520 | 99 | -> | Plus |
arm_X | 6484066..6484281 | 521..736 | 100 | -> | Plus |
arm_X | 6484347..6484679 | 737..1069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6597411..6597930 | 1..520 | 99 | -> | Plus |
X | 6598131..6598346 | 521..736 | 100 | -> | Plus |
X | 6598412..6598744 | 737..1069 | 100 | Plus |
Translation from 1 to 978
> AT21872.hyp CCREIRCKNLFSQNLFCNAHKWTNATNRRQAVVNIIASSAGAPHNSRCLP ATTSVYPSNMSHHQHVLSEAAALRLINGLESAGNATMPLGAQPPQSAAAE AICSSQIVASAHGTPTASTAALEISSARQRMLRSHLQESLHSANESGNSC RICRWNRNDMEIIKCPCNCKGSVGYIHLKCLKRWIMHRRDNRCEICNAVF NIAEERASLKQMIRTFCCGRCCGLIVKHLLFSASLMPLAHIILQQVLQCM DNMNQGSTDQLTVQEVFVASCALLTSSALFFHFFEFVTTRFMLIRNILSH WWMFGSTSDFELVEIEDDSIDFFDD*
Translation from 1 to 978
> AT21872.pep CCREIRCKNLFSQNLFCNAHKWTNATNRRQAVVNIIASSAGAPHNSRCLP ATTSVYPSNMSHHQHVLSEAAALRLINGLESAGNATMPLGAQPPQSAAAE AICSSQIVASAHGTPTASTAALEISSARQRMLRSHLQESLHSANESGNSC RICRWNRNDMEIIKCPCNCKGSVGYIHLKCLKRWIMHRRDNRCEICNAVF NIAEERASLKQMIRTFCCGRCCGLIVKHLLFSASLMPLAHIILQQVLQCM DNMNQGSTDQLTVQEVFVASCALLTSSALFFHFFEFVTTRFMLIRNILSH WWMFGSTSDFELVEIEDDSIDFFDD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22266-PA | 292 | GF22266-PA | 1..292 | 60..323 | 1060 | 71.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19596-PA | 277 | GG19596-PA | 1..277 | 60..325 | 1177 | 81.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12688-PA | 245 | GH12688-PA | 6..245 | 64..323 | 824 | 61.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17717-PA | 266 | CG17717-PA | 1..266 | 60..325 | 1404 | 100 | Plus |
CG17717-PB | 260 | CG17717-PB | 1..260 | 60..325 | 1353 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16362-PA | 302 | GI16362-PA | 116..302 | 137..323 | 906 | 85 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14305-PA | 277 | GL14305-PA | 1..252 | 60..310 | 869 | 66.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14623-PA | 265 | GA14623-PA | 1..265 | 60..323 | 907 | 65.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12500-PA | 273 | GM12500-PA | 1..273 | 60..325 | 1307 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16805-PA | 273 | GD16805-PA | 1..273 | 60..325 | 1300 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16731-PA | 158 | GJ16731-PA | 10..158 | 172..320 | 696 | 83.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20143-PA | 264 | GK20143-PA | 1..264 | 60..323 | 898 | 68.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16756-PA | 273 | GE16756-PA | 1..273 | 60..325 | 1156 | 84.3 | Plus |