Clone AT21895 Report

Search the DGRC for AT21895

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:218
Well:95
Vector:pOTB7
Associated Gene/TranscriptCG33140-RA
Protein status:AT21895.pep: gold
Preliminary Size:2307
Sequenced Size:2537

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG33140 2002-09-15 Blastp of sequenced clone
CG33140 2003-01-01 Sim4 clustering to Release 3
CG33140 2008-04-29 Release 5.5 accounting
CG33140 2008-08-15 Release 5.9 accounting
CG33140 2008-12-18 5.12 accounting

Clone Sequence Records

AT21895.complete Sequence

2537 bp (2537 high quality bases) assembled on 2002-09-15

GenBank Submission: BT001339

> AT21895.complete
CCAACGAGTCATATAGCTAGCTTGAAACTAAGCCTTTTCAATTCGAGTCA
ATATATATTTTATAATTGTTCAAGTTAACTCGAACCCCAAACTGAACCAC
GTTACAAAATGGAGGGCATGGAAGATATTAACCTCAAAACCAACGGGTCC
GATACCTTTTCGAAATTTACACTGGCCAACATGGTGTCGCTGCCATCTTC
TTTGACCGAACCGACGACCCGTTCGACTGCACAGGCGCAGCTGAATGCCG
AGTCCCCCATGGGCAAGTACACGGAGCGCATGGTGGAGGATATTCTGACC
GAGATTTTCAAGGAGCGACGGGGGGACTTTCCAGAGACCTCATCCTCTTG
TCACGCGGCTAATATTCCGTGGCCAATTAAGGAGCGGGAACCGCACGTGG
ACAAACGGCTGCGATACTGGAAGGAGGTACTTCACCAGCGCAAGTTGATG
CAAGAACGAGTCCAGCGGGAAACGGGCAAGCTGGCCAGTGAGGTGCTCTT
CAACCGCCGCTCCACTCTGGACAACCGCGACGGGCAAATGGTGAAGCGCG
TGCTGGACTACGCGGACCGCATGAAGGGCGAGCGTCTGATGAGCGCGCCA
CTTTCCAAGCTGGGCGACCAATTGGATCCATGTACCTGCCAGGTAGTTCC
TGGACTGCAGGCCACGACACCGAAAGCGGAAAAGGTGGGCTACAAGGATT
TAGAGATCGTTGGCATGCCAGAGGTCTGCAAAACGGAGATCTTGGGTAAG
GAGGCCATGGAGCAGGACCCACCACCAGGCTGGCTGCAATCGGAGTTCCT
GGACAAACGACTGGAGCAAAACTTTGTAGACATCCAAAACGTTGTGGAGT
TCTTTCCCGATGTGGATGCCCTGCAGGTGAAGGGTACTGCTCTCAGCAAG
ATCAATCGATTACCGAAGCCGTTCCTAGTGGATGTGGATTCCATGCACAC
GGTGACCAAAAGTGAGAGCTCGCCGATCTGCACCGAGGAGTGCATCTGCG
AGTCGTGTGGCGAAACGGAGGAGAAATCGTCAGGAACTCCACCTCCCATT
CCGGATGTGGGACTACGGGTTAATGGTGTAGATTACGTTCCGTGCGAGGG
AGATGGCGGCGGAATTAAGGACTGCTATGAAATAGTCGCCCGATTCACAT
GCGATCCGTTTCAGCGTCGCCTCAAGCACGTCCTACAGCTGACCAACATT
GGCACACAGTCGCTCTCCTTCTCCTGGAAACAGAGCACTTACTACTACAA
CCGTGGATCTCTGTTGCTGGCCCAGGACAACGAGTTTCACTTTGACCTGG
AGGGCTTCAGACTGTCGCACGGTGAGACTCGGAATGTAGCAGTGCTCTAC
CAGCCACGAAAAGTGGCGATGGCGGTGGAGTTGTGGCTGCTTCAGGTGGA
GCCGCGAATCTTTTGCGGCCGCCAGGAGTCCTTACTGCTCCGCCTTTACG
GACGTTGCACTCCGCCAGCTGACTACATGGCCAAACTACTCGAGTGCCAA
TGCGTCTGCATCTGCAAGTCGGATGCAGTGGAAATGGATAAATTGACCAC
CCATTTGGGCGCTCTGGCTCCCATGGTGGTGCCTCCACCGACGTGCTGCC
CCTATGAGCGGCCTCTGGACGATCGGGAGGCGTTCAACGCCCTAAATCCG
GGATACATTTGTGCCCGCTTCGATGACCTGGAGGTGCTTCGTGCGTTCCA
TCAGCGCTTAAAGAAGCCGCGGGAGCCGCTCTGGGATATGCGCCTATCAA
CGATTAAGGACTACATAATGCGGATTAACGGACTGGTGGAGCGGGAATCG
ATCTTTTCCGAATTTAACCAACTTCTCGCTCCTTTGCTAGGTGGCGGATT
CTCACTGAATGCCTCTTCCCAGCAGGATGTCCAAAAGCAACGGTCGCGGT
TCATATATGTGCGCGGTGTGATCTGCAATGGGATCGCTGAATGGGAGGAC
CTAATGTTCAATGTGGAAGATTCTTTTTTCAAGCCAGAGCTTCAGCGGTA
CTACCAAAGCTTGTTGGGAGAGTCCGAAGAAGGAGATGAAGAAGAACCAG
ATCAACCAAAGCCAATGACGCCCATCGACATGGAGAAACTGATGGAAATT
TTAGGCGAGACGGAGTTGGACGAGAAGAAGATCCGGACGGCGGTGATCCG
CAAATTGTATCGGTCCAAATATTTCCGGGATGCACTCTATATCCAAACCT
ACTCACATCTGTGCAACATGTCAGAGGACATTGTGTCCGTTATAGAGAGT
ACGGAAATAGTACCGACCTAAGGAAATTTTAGGCGAGACGGAGTTGGACG
AGAAGAAGATCCGGACGGCGGTGATCCGCAAATTGTATCGGTCCAAATAT
TTCCGGGATGCACTCTATATCCAAACCTACTCACATCTGTGCAACATGTC
AGAGGACATTGTGTCCGTTATAGAGAGTACGGAAATAGTACCGACCTAAG
GAGATATATAATCCTGGACAAATCAATGGTTTTCACAATACATTAAGTAC
ATAAGAGAAGTTAGAAAGGAAAAAAAAAAAAAAAAAA

AT21895.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:42:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG33140-RA 2271 CG33140-RA 1..2271 1..2271 11325 99.9 Plus
CG33140-RA 2271 CG33140-RA 2094..2271 2272..2449 890 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:25:37
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 3065782..3068055 1..2274 11340 99.9 Plus
chr2R 21145070 chr2R 3067875..3068122 2272..2519 1240 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:55:54 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:25:35
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7178390..7180663 1..2274 11340 99.9 Plus
2R 25286936 2R 7180483..7180732 2272..2521 1250 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:15:30
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 7179589..7181862 1..2274 11340 99.9 Plus
2R 25260384 2R 7181682..7181931 2272..2521 1250 100 Plus
Blast to na_te.dros performed on 2019-03-15 11:25:35 has no hits.

AT21895.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:26:21 Download gff for AT21895.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 3065782..3068055 1..2274 99 == Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:17:07 Download gff for AT21895.complete
Subject Subject Range Query Range Percent Splice Strand
CG33140-RA 1..2163 109..2271 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:15:13 Download gff for AT21895.complete
Subject Subject Range Query Range Percent Splice Strand
CG33140-RA 1..2163 109..2271 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:28:52 Download gff for AT21895.complete
Subject Subject Range Query Range Percent Splice Strand
CG33140-RA 1..2163 109..2271 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:06:09 Download gff for AT21895.complete
Subject Subject Range Query Range Percent Splice Strand
CG33140-RA 1..2163 109..2271 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:33:45 Download gff for AT21895.complete
Subject Subject Range Query Range Percent Splice Strand
CG33140-RA 1..2163 109..2271 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:38:44 Download gff for AT21895.complete
Subject Subject Range Query Range Percent Splice Strand
CG33140-RA 1..2271 1..2271 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:15:13 Download gff for AT21895.complete
Subject Subject Range Query Range Percent Splice Strand
CG33140-RA 1..2271 1..2271 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:28:52 Download gff for AT21895.complete
Subject Subject Range Query Range Percent Splice Strand
CG33140-RA 1..2274 1..2274 99 == Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:06:09 Download gff for AT21895.complete
Subject Subject Range Query Range Percent Splice Strand
CG33140-RA 1..2271 1..2271 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:33:45 Download gff for AT21895.complete
Subject Subject Range Query Range Percent Splice Strand
CG33140-RA 1..2274 1..2274 99 == Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:26:21 Download gff for AT21895.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7178390..7180663 1..2274 99 == Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:26:21 Download gff for AT21895.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7178390..7180663 1..2274 99 == Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:26:21 Download gff for AT21895.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7178390..7180663 1..2274 99 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:28:52 Download gff for AT21895.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3065895..3068168 1..2274 99 == Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:38:06 Download gff for AT21895.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7179589..7181862 1..2274 99 == Plus

AT21895.pep Sequence

Translation from 108 to 2270

> AT21895.pep
MEGMEDINLKTNGSDTFSKFTLANMVSLPSSLTEPTTRSTAQAQLNAESP
MGKYTERMVEDILTEIFKERRGDFPETSSSCHAANIPWPIKEREPHVDKR
LRYWKEVLHQRKLMQERVQRETGKLASEVLFNRRSTLDNRDGQMVKRVLD
YADRMKGERLMSAPLSKLGDQLDPCTCQVVPGLQATTPKAEKVGYKDLEI
VGMPEVCKTEILGKEAMEQDPPPGWLQSEFLDKRLEQNFVDIQNVVEFFP
DVDALQVKGTALSKINRLPKPFLVDVDSMHTVTKSESSPICTEECICESC
GETEEKSSGTPPPIPDVGLRVNGVDYVPCEGDGGGIKDCYEIVARFTCDP
FQRRLKHVLQLTNIGTQSLSFSWKQSTYYYNRGSLLLAQDNEFHFDLEGF
RLSHGETRNVAVLYQPRKVAMAVELWLLQVEPRIFCGRQESLLLRLYGRC
TPPADYMAKLLECQCVCICKSDAVEMDKLTTHLGALAPMVVPPPTCCPYE
RPLDDREAFNALNPGYICARFDDLEVLRAFHQRLKKPREPLWDMRLSTIK
DYIMRINGLVERESIFSEFNQLLAPLLGGGFSLNASSQQDVQKQRSRFIY
VRGVICNGIAEWEDLMFNVEDSFFKPELQRYYQSLLGESEEGDEEEPDQP
KPMTPIDMEKLMEILGETELDEKKIRTAVIRKLYRSKYFRDALYIQTYSH
LCNMSEDIVSVIESTEIVPT*

AT21895.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 04:05:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12241-PA 760 GF12241-PA 30..760 3..720 2638 66.7 Plus
Dana\GF12701-PA 727 GF12701-PA 42..727 24..718 821 31.9 Plus
Dana\GF12240-PA 738 GF12240-PA 46..738 57..718 736 29.7 Plus
Dana\GF12700-PA 535 GF12700-PA 195..503 315..632 440 32.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 04:05:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23265-PA 747 GG23265-PA 33..747 10..720 3456 89.1 Plus
Dere\GG23267-PA 710 GG23267-PA 62..708 58..716 863 33.2 Plus
Dere\GG23264-PA 704 GG23264-PA 47..702 59..715 735 30.9 Plus
Dere\GG23266-PA 542 GG23266-PA 58..539 134..715 475 28.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 04:05:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21521-PA 704 GH21521-PA 1..704 9..720 1857 51 Plus
Dgri\GH21523-PA 693 GH21523-PA 24..693 23..718 887 33.7 Plus
Dgri\GH21520-PA 736 GH21520-PA 114..733 55..715 807 30.9 Plus
Dgri\GH21522-PA 508 GH21522-PA 115..506 278..716 435 30 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:50:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG33140-PA 720 CG33140-PA 1..720 1..720 3797 100 Plus
CG30384-PA 708 CG30384-PA 65..706 56..716 859 33.2 Plus
CG11060-PA 706 CG11060-PA 51..704 59..715 781 31.3 Plus
CG30385-PA 536 CG30385-PA 24..533 58..715 491 25.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 04:05:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19491-PA 740 GI19491-PA 25..740 10..720 1790 51.5 Plus
Dmoj\GI19493-PA 672 GI19493-PA 53..672 58..718 925 34.7 Plus
Dmoj\GI19490-PA 689 GI19490-PA 94..689 100..718 735 32.2 Plus
Dmoj\GI19492-PA 563 GI19492-PA 52..563 96..718 558 29.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 04:05:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26004-PA 819 GL26004-PA 112..818 17..719 2136 57.5 Plus
Dper\GL13788-PA 696 GL13788-PA 53..696 56..718 919 33.7 Plus
Dper\GL24846-PA 874 GL24846-PA 1..473 25..530 546 29 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 04:05:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25232-PA 768 GA25232-PA 61..767 17..719 2129 57.2 Plus
Dpse\GA26794-PA 709 GA26794-PA 53..709 56..718 939 34.4 Plus
Dpse\GA23528-PA 644 GA23528-PA 22..643 47..715 744 30.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 04:05:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20937-PA 539 GM20937-PA 124..539 275..720 2177 91.9 Plus
Dsec\GM20936-PA 195 GM20936-PA 1..194 1..195 980 94.9 Plus
Dsec\GM20939-PA 708 GM20939-PA 62..706 56..716 848 32.9 Plus
Dsec\GM20935-PA 706 GM20935-PA 51..704 59..715 795 31.4 Plus
Dsec\GM20937-PA 539 GM20937-PA 1..114 1..114 584 95.6 Plus
Dsec\GM20938-PA 536 GM20938-PA 24..533 58..715 490 25.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 04:05:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10462-PA 717 GD10462-PA 1..717 4..720 3784 97.8 Plus
Dsim\GD10461-PA 706 GD10461-PA 51..704 59..715 791 31.4 Plus
Dsim\GD10465-PA 679 GD10465-PA 65..605 56..603 661 31.3 Plus
Dsim\GD10464-PA 222 GD10464-PA 1..219 444..715 206 26.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 04:05:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15153-PA 713 GJ15153-PA 21..713 17..720 1882 51.7 Plus
Dvir\GJ15156-PA 707 GJ15156-PA 54..707 58..718 989 34.5 Plus
Dvir\GJ15152-PA 738 GJ15152-PA 85..735 32..715 828 32.1 Plus
Dvir\GJ15155-PA 597 GJ15155-PA 21..597 58..718 567 27.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 04:05:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21794-PA 718 GK21794-PA 12..718 18..720 1950 52.9 Plus
Dwil\GK19405-PA 713 GK19405-PA 56..713 56..718 1097 37 Plus
Dwil\GK21792-PA 693 GK21792-PA 90..690 97..715 824 35.6 Plus
Dwil\GK19404-PA 598 GK19404-PA 14..598 56..718 781 30.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 04:05:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19113-PA 748 GE19113-PA 33..748 10..720 3373 87.7 Plus
Dyak\GE19115-PA 707 GE19115-PA 60..705 56..716 867 33.2 Plus
Dyak\GE19112-PA 706 GE19112-PA 51..704 59..715 760 31.6 Plus
Dyak\GE19114-PA 542 GE19114-PA 24..539 58..715 485 25.5 Plus

AT21895.hyp Sequence

Translation from 108 to 2270

> AT21895.hyp
MEGMEDINLKTNGSDTFSKFTLANMVSLPSSLTEPTTRSTAQAQLNAESP
MGKYTERMVEDILTEIFKERRGDFPETSSSCHAANIPWPIKEREPHVDKR
LRYWKEVLHQRKLMQERVQRETGKLASEVLFNRRSTLDNRDGQMVKRVLD
YADRMKGERLMSAPLSKLGDQLDPCTCQVVPGLQATTPKAEKVGYKDLEI
VGMPEVCKTEILGKEAMEQDPPPGWLQSEFLDKRLEQNFVDIQNVVEFFP
DVDALQVKGTALSKINRLPKPFLVDVDSMHTVTKSESSPICTEECICESC
GETEEKSSGTPPPIPDVGLRVNGVDYVPCEGDGGGIKDCYEIVARFTCDP
FQRRLKHVLQLTNIGTQSLSFSWKQSTYYYNRGSLLLAQDNEFHFDLEGF
RLSHGETRNVAVLYQPRKVAMAVELWLLQVEPRIFCGRQESLLLRLYGRC
TPPADYMAKLLECQCVCICKSDAVEMDKLTTHLGALAPMVVPPPTCCPYE
RPLDDREAFNALNPGYICARFDDLEVLRAFHQRLKKPREPLWDMRLSTIK
DYIMRINGLVERESIFSEFNQLLAPLLGGGFSLNASSQQDVQKQRSRFIY
VRGVICNGIAEWEDLMFNVEDSFFKPELQRYYQSLLGESEEGDEEEPDQP
KPMTPIDMEKLMEILGETELDEKKIRTAVIRKLYRSKYFRDALYIQTYSH
LCNMSEDIVSVIESTEIVPT*

AT21895.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:09:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG33140-PA 720 CG33140-PA 1..720 1..720 3797 100 Plus
CG30384-PA 708 CG30384-PA 65..706 56..716 859 33.2 Plus
CG11060-PA 706 CG11060-PA 51..704 59..715 781 31.3 Plus
CG30385-PA 536 CG30385-PA 24..533 58..715 491 25.8 Plus