BDGP Sequence Production Resources |
Search the DGRC for AT21920
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 219 |
Well: | 20 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG15708-RA |
Protein status: | AT21920.pep: gold |
Preliminary Size: | 696 |
Sequenced Size: | 944 |
Gene | Date | Evidence |
---|---|---|
CG15708 | 2002-01-01 | Sim4 clustering to Release 2 |
CG15708 | 2002-02-26 | Blastp of sequenced clone |
CG15708 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15708 | 2008-04-29 | Release 5.5 accounting |
CG15708 | 2008-08-15 | Release 5.9 accounting |
CG15708 | 2008-12-18 | 5.12 accounting |
944 bp (944 high quality bases) assembled on 2002-02-26
GenBank Submission: AY089394
> AT21920.complete AAAACCCATTCGTCGTCTAAAGTATTTCACTTTTGTAAAAGTATCTCTAG AGTTATATAGCGAATGGGGCCATGTCCCAGACAAATCCGAAACCAAGTGA TACGCAATCACTGCGCTGTTTGCACTGCATGAAGGTGATCCGTTGCTCCC GCTACGACACCAGTGAACTGGTGCGACACATCCAACAGGATCATCCGGAG ATATACGCAGTGACCACGGATAAAATCAAGAATCTGCACAAGCTGGCCGC GGATCACGGCATCAGTGAGGAGCGGCTCTCGAAGATTAGCAAGATGACGG GTCTGTCCGAGTCCCAGATGGCCGAAAAGGCAGAGAAATATATGGCCAAA AAGAAGAATTATGGTCGCAGTGGTGGATCTGTCGCCGGTGACCCTGCTGC CGTCAGTGAAGCCGCCTCCTACAAAACCGAGAAGCCCAGCTCCCCATGTC CATGTTCACGTCCATTGGAGAACTCGACGTCGCATCGGAGGAAATGCTAT CGCGCCTCCATCGAACGCTGGGCACCGGCGGAGGGGCGCATCTTTTGTCC GTGCTGCGCGACCAGCAGGCGGCCGCTTATCAAGGCTGCCACTGAGATCT CGAACAACGGCTGCTGTGCCGCCTGGGTGGTCTCCTGCTGGCCTCTGTGC TTCCTGCCCTGCCTCATGTCCGCGGACAACAATGAGTACCTGTACTGCGC CAATTGCCGCGCCTTTCTGGGCATCTACAATCGCGAGAAAAGCTGTGTGC AGCCCAGCAAGGAGTTTGTGTCCTGCAGCAAGTCGGTCACGGCCCCGCTC AAGTGTCCAACTGAAAACCTGTGAAAGGACTTTGAGTGGGCGTAGTACTT ATTAAATTGGTTGTGTATACATCTGGCTATGTTTTTTTTTTTTAATAAAA AACAAGTTGTTCGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15708-RA | 973 | CG15708-RA | 58..973 | 1..916 | 4580 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 12128297..12128833 | 340..876 | 100 | <- | Minus |
chr2R | 12128890..12129228 | 1..339 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15708-RA | 1..753 | 72..824 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15708-RA | 1..753 | 72..824 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15708-RA | 1..753 | 72..824 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15708-RA | 1..753 | 72..824 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15708-RA | 29..943 | 1..915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15708-RA | 29..943 | 1..915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15708-RA | 29..943 | 1..915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15708-RA | 29..943 | 1..915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15708-RA | 29..943 | 1..915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16240936..16241511 | 340..915 | 100 | <- | Minus |
2R | 16241568..16241906 | 1..339 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16240936..16241511 | 340..915 | 100 | <- | Minus |
2R | 16241568..16241906 | 1..339 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16240936..16241511 | 340..915 | 100 | <- | Minus |
2R | 16241568..16241906 | 1..339 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 12128441..12129016 | 340..915 | 100 | <- | Minus |
arm_2R | 12129073..12129411 | 1..339 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16242135..16242710 | 340..915 | 100 | <- | Minus |
2R | 16242767..16243105 | 1..339 | 100 | Minus |
Translation from 71 to 823
> AT21920.pep MSQTNPKPSDTQSLRCLHCMKVIRCSRYDTSELVRHIQQDHPEIYAVTTD KIKNLHKLAADHGISEERLSKISKMTGLSESQMAEKAEKYMAKKKNYGRS GGSVAGDPAAVSEAASYKTEKPSSPCPCSRPLENSTSHRRKCYRASIERW APAEGRIFCPCCATSRRPLIKAATEISNNGCCAAWVVSCWPLCFLPCLMS ADNNEYLYCANCRAFLGIYNREKSCVQPSKEFVSCSKSVTAPLKCPTENL *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11280-PA | 248 | GF11280-PA | 1..239 | 1..242 | 780 | 62.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22287-PA | 253 | GG22287-PA | 1..239 | 1..240 | 1070 | 86.7 | Plus |
Dere\GG18533-PA | 232 | GG18533-PA | 1..232 | 1..233 | 488 | 41 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19760-PA | 223 | GH19760-PA | 1..221 | 1..233 | 588 | 48.7 | Plus |
Dgri\GH19759-PA | 208 | GH19759-PA | 1..207 | 1..234 | 475 | 42.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15708-PA | 250 | CG15708-PA | 1..250 | 1..250 | 1354 | 100 | Plus |
CG12684-PA | 231 | CG12684-PA | 10..228 | 12..230 | 379 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20297-PA | 216 | GI20297-PA | 7..216 | 8..237 | 633 | 53.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11360-PA | 236 | GL11360-PA | 8..226 | 10..233 | 695 | 56.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13904-PA | 236 | GA13904-PA | 8..226 | 10..233 | 688 | 56.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20075-PA | 247 | GM20075-PA | 1..247 | 1..250 | 1201 | 91.6 | Plus |
Dsec\GM12681-PA | 230 | GM12681-PA | 11..230 | 14..233 | 321 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25556-PA | 247 | GD25556-PA | 1..247 | 1..250 | 1203 | 92 | Plus |
Dsim\GD16290-PA | 233 | GD16290-PA | 1..233 | 1..233 | 355 | 31.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22024-PA | 217 | GJ22024-PA | 4..215 | 7..233 | 641 | 52.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21438-PA | 247 | GK21438-PA | 5..226 | 8..236 | 643 | 52.6 | Plus |
Translation from 71 to 823
> AT21920.hyp MSQTNPKPSDTQSLRCLHCMKVIRCSRYDTSELVRHIQQDHPEIYAVTTD KIKNLHKLAADHGISEERLSKISKMTGLSESQMAEKAEKYMAKKKNYGRS GGSVAGDPAAVSEAASYKTEKPSSPCPCSRPLENSTSHRRKCYRASIERW APAEGRIFCPCCATSRRPLIKAATEISNNGCCAAWVVSCWPLCFLPCLMS ADNNEYLYCANCRAFLGIYNREKSCVQPSKEFVSCSKSVTAPLKCPTENL *