Clone AT22101 Report

Search the DGRC for AT22101

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:221
Well:1
Vector:pOTB7
Associated Gene/TranscriptCG15025-RA
Protein status:AT22101.pep: gold
Preliminary Size:1032
Sequenced Size:1396

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15025 2002-01-01 Sim4 clustering to Release 2
CG15025 2002-01-03 Blastp of sequenced clone
CG15025 2003-01-01 Sim4 clustering to Release 3
CG15025 2008-04-29 Release 5.5 accounting
CG15025 2008-08-15 Release 5.9 accounting
CG15025 2008-12-18 5.12 accounting

Clone Sequence Records

AT22101.complete Sequence

1396 bp (1396 high quality bases) assembled on 2002-01-03

GenBank Submission: AY075258

> AT22101.complete
TTTTTCCAGAGAAAAACCATACACTCAAAAAATAAAAAGAAAAACAGTTG
AAAAATAAAACAATTCATAAAAAAAAAAATCGTTAGACAACAAAAAACAC
TGAAGCGATGCGAAATTCAAAGAAAGATTCGTTCAGGGAAGAAATTGGGA
GTGGGACTAGGAGGCCGCACAACTCGCTAAATGACCCCTTGAATCTGGTT
GACCGGGAACTATCTGTTCTCTTGAGGATACCGAAGCTTAAATTCAAATC
CGTGGAGCCCCTACCCATCGCTTCCAGGGACTATGGGCTAATGAAGTCCT
CTAATAAGTCGTCGACTCCATATCCTCGCGCGCAGCAAGGAGTTGATGCC
AGTTTACTAAAGGCCCGCCTCATAATGCGTACTGGTTCTGATAATCGAAA
CAATTCACGCTCGGAAAGGCCAGAAAGACCGGAAAGGCCGGACGACGGAA
GTCCAAGTATCAGCGATGGGAGCTCTCATAGGTCGAAAACCCTGCCAAAA
TCTAAGCCTTCTGTATCCGTATTTCGTCGCCAGTCGCTGACTAGGAGTAT
CAAGGATATAGTTGCCGTTGGCACTCCGCATCCAAAAAAAGGCGTGGCCT
TGAATCCCAGGGTACTGGGCCGGCGGCTGACCGACATAAACGAAATGTTA
TGGAAAACAACCGATATGAGCGAACATTCAATGCCAAACCTGGTGAAGCC
GAAGAGGTTAAAGGGGAAAAGGAAGGTCCTACTGGCAACGCCCGCGGAAA
GTCGAGAATCGGAGTTTTTACACCGCCCCGGAGCACCGCCAGATGGAGAC
CTGGTCGGTGATGGTGTGAGCCCGCGGTTAACCCAGATCGACAGCACGTT
GTGCTCGATTAGCGAGGAATTCCAGGAGCCGCAGCTGAGTTTCGCAGAGC
GACGCAAGATTTCCCAGGAGGGGGAGTACACCATTGCGAAATACGGCCGC
AAAATGAGCGATGTGATGATGGCGGCCCCAAATGCAAACCAGGAGGTTGA
CGACAAAAGTGTGCGTTACGCAAAAAAAGCTAGTTTAGAAATGGAGAGGT
ATATGCGATCGCAGGGCCTGGTCAAAATATCTAACGATCAGGTTACCATG
ACCAGAAATATGGCCCGTATATCGACGCAGATGAACTGATCCCATTACGA
AAAACCCATAGCTACTGGTCACAAAAGCAATTTCTTGTAGCTTAGCTAGC
AGGATTGCCAAAGGATGAGAGATCTCTACACCTCCTGCACTCCTGCTGGT
TAGAGATATGAGACTTCGATGTGGTGTCTGAATATATTCAACAATTTGGA
TTTTATAATATGTAAATTGTGGTCAACTTCTCAAAAACTCTATAATATAA
TTGAAATATATATAAAACGATTTGAACAAAAAAAAAAAAAAAAAAA

AT22101.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:34:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG15025-RA 1422 CG15025-RA 40..1417 1..1380 6800 99.6 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:44:36
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 15313469..15314341 1377..505 4350 99.9 Minus
chr3R 27901430 chr3R 15314474..15314986 506..1 2325 97.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:56:02 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:44:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19489567..19490442 1380..505 4350 99.8 Minus
3R 32079331 3R 19490574..19491077 506..1 2450 99.4 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:02:38
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 19230398..19231273 1380..505 4350 99.7 Minus
3R 31820162 3R 19231405..19231908 506..1 2460 99.4 Minus
Blast to na_te.dros performed on 2019-03-16 04:44:35 has no hits.

AT22101.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:45:11 Download gff for AT22101.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 15313469..15314339 507..1377 99 <- Minus
chr3R 15314474..15314986 1..506 97   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:17:17 Download gff for AT22101.complete
Subject Subject Range Query Range Percent Splice Strand
CG15025-RA 1..1032 108..1139 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:57:12 Download gff for AT22101.complete
Subject Subject Range Query Range Percent Splice Strand
CG15025-RA 1..1032 108..1139 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:41:18 Download gff for AT22101.complete
Subject Subject Range Query Range Percent Splice Strand
CG15025-RA 1..1032 108..1139 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:21:59 Download gff for AT22101.complete
Subject Subject Range Query Range Percent Splice Strand
CG15025-RA 1..1032 108..1139 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:50:15 Download gff for AT22101.complete
Subject Subject Range Query Range Percent Splice Strand
CG15025-RA 1..1032 108..1139 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:21:42 Download gff for AT22101.complete
Subject Subject Range Query Range Percent Splice Strand
CG15025-RA 39..1413 1..1377 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:57:12 Download gff for AT22101.complete
Subject Subject Range Query Range Percent Splice Strand
CG15025-RA 39..1413 1..1377 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:41:18 Download gff for AT22101.complete
Subject Subject Range Query Range Percent Splice Strand
CG15025-RA 39..1413 1..1377 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:21:59 Download gff for AT22101.complete
Subject Subject Range Query Range Percent Splice Strand
CG15025-RA 39..1413 1..1377 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:50:15 Download gff for AT22101.complete
Subject Subject Range Query Range Percent Splice Strand
CG15025-RA 39..1413 1..1377 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:45:11 Download gff for AT22101.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19489570..19490440 507..1377 99 <- Minus
3R 19490574..19491077 1..506 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:45:11 Download gff for AT22101.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19489570..19490440 507..1377 99 <- Minus
3R 19490574..19491077 1..506 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:45:11 Download gff for AT22101.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19489570..19490440 507..1377 99 <- Minus
3R 19490574..19491077 1..506 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:41:18 Download gff for AT22101.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 15315292..15316162 507..1377 99 <- Minus
arm_3R 15316296..15316799 1..506 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:56:51 Download gff for AT22101.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19230401..19231271 507..1377 99 <- Minus
3R 19231405..19231908 1..506 99   Minus

AT22101.pep Sequence

Translation from 107 to 1138

> AT22101.pep
MRNSKKDSFREEIGSGTRRPHNSLNDPLNLVDRELSVLLRIPKLKFKSVE
PLPIASRDYGLMKSSNKSSTPYPRAQQGVDASLLKARLIMRTGSDNRNNS
RSERPERPERPDDGSPSISDGSSHRSKTLPKSKPSVSVFRRQSLTRSIKD
IVAVGTPHPKKGVALNPRVLGRRLTDINEMLWKTTDMSEHSMPNLVKPKR
LKGKRKVLLATPAESRESEFLHRPGAPPDGDLVGDGVSPRLTQIDSTLCS
ISEEFQEPQLSFAERRKISQEGEYTIAKYGRKMSDVMMAAPNANQEVDDK
SVRYAKKASLEMERYMRSQGLVKISNDQVTMTRNMARISTQMN*

AT22101.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 03:01:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18458-PA 351 GF18458-PA 32..317 43..339 434 39 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 03:01:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15941-PA 337 GG15941-PA 1..327 1..340 1015 62.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:48:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG15025-PA 343 CG15025-PA 1..343 1..343 1741 100 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 03:01:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11961-PA 426 GL11961-PA 14..373 36..333 317 31.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 03:01:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13443-PB 432 GA13443-PB 14..379 36..333 319 30.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 03:01:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26904-PA 351 GM26904-PA 1..334 1..333 1479 89.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 03:01:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20111-PA 421 GD20111-PA 1..138 1..136 529 85.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 03:01:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13477-PA 348 GK13477-PA 27..312 44..339 283 33 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 03:01:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25124-PA 356 GE25124-PA 1..337 1..343 1110 64.7 Plus

AT22101.hyp Sequence

Translation from 107 to 1138

> AT22101.hyp
MRNSKKDSFREEIGSGTRRPHNSLNDPLNLVDRELSVLLRIPKLKFKSVE
PLPIASRDYGLMKSSNKSSTPYPRAQQGVDASLLKARLIMRTGSDNRNNS
RSERPERPERPDDGSPSISDGSSHRSKTLPKSKPSVSVFRRQSLTRSIKD
IVAVGTPHPKKGVALNPRVLGRRLTDINEMLWKTTDMSEHSMPNLVKPKR
LKGKRKVLLATPAESRESEFLHRPGAPPDGDLVGDGVSPRLTQIDSTLCS
ISEEFQEPQLSFAERRKISQEGEYTIAKYGRKMSDVMMAAPNANQEVDDK
SVRYAKKASLEMERYMRSQGLVKISNDQVTMTRNMARISTQMN*

AT22101.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:10:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG15025-PA 343 CG15025-PA 1..343 1..343 1741 100 Plus