Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
AT22101.complete Sequence
1396 bp (1396 high quality bases) assembled on 2002-01-03
GenBank Submission: AY075258
> AT22101.complete
TTTTTCCAGAGAAAAACCATACACTCAAAAAATAAAAAGAAAAACAGTTG
AAAAATAAAACAATTCATAAAAAAAAAAATCGTTAGACAACAAAAAACAC
TGAAGCGATGCGAAATTCAAAGAAAGATTCGTTCAGGGAAGAAATTGGGA
GTGGGACTAGGAGGCCGCACAACTCGCTAAATGACCCCTTGAATCTGGTT
GACCGGGAACTATCTGTTCTCTTGAGGATACCGAAGCTTAAATTCAAATC
CGTGGAGCCCCTACCCATCGCTTCCAGGGACTATGGGCTAATGAAGTCCT
CTAATAAGTCGTCGACTCCATATCCTCGCGCGCAGCAAGGAGTTGATGCC
AGTTTACTAAAGGCCCGCCTCATAATGCGTACTGGTTCTGATAATCGAAA
CAATTCACGCTCGGAAAGGCCAGAAAGACCGGAAAGGCCGGACGACGGAA
GTCCAAGTATCAGCGATGGGAGCTCTCATAGGTCGAAAACCCTGCCAAAA
TCTAAGCCTTCTGTATCCGTATTTCGTCGCCAGTCGCTGACTAGGAGTAT
CAAGGATATAGTTGCCGTTGGCACTCCGCATCCAAAAAAAGGCGTGGCCT
TGAATCCCAGGGTACTGGGCCGGCGGCTGACCGACATAAACGAAATGTTA
TGGAAAACAACCGATATGAGCGAACATTCAATGCCAAACCTGGTGAAGCC
GAAGAGGTTAAAGGGGAAAAGGAAGGTCCTACTGGCAACGCCCGCGGAAA
GTCGAGAATCGGAGTTTTTACACCGCCCCGGAGCACCGCCAGATGGAGAC
CTGGTCGGTGATGGTGTGAGCCCGCGGTTAACCCAGATCGACAGCACGTT
GTGCTCGATTAGCGAGGAATTCCAGGAGCCGCAGCTGAGTTTCGCAGAGC
GACGCAAGATTTCCCAGGAGGGGGAGTACACCATTGCGAAATACGGCCGC
AAAATGAGCGATGTGATGATGGCGGCCCCAAATGCAAACCAGGAGGTTGA
CGACAAAAGTGTGCGTTACGCAAAAAAAGCTAGTTTAGAAATGGAGAGGT
ATATGCGATCGCAGGGCCTGGTCAAAATATCTAACGATCAGGTTACCATG
ACCAGAAATATGGCCCGTATATCGACGCAGATGAACTGATCCCATTACGA
AAAACCCATAGCTACTGGTCACAAAAGCAATTTCTTGTAGCTTAGCTAGC
AGGATTGCCAAAGGATGAGAGATCTCTACACCTCCTGCACTCCTGCTGGT
TAGAGATATGAGACTTCGATGTGGTGTCTGAATATATTCAACAATTTGGA
TTTTATAATATGTAAATTGTGGTCAACTTCTCAAAAACTCTATAATATAA
TTGAAATATATATAAAACGATTTGAACAAAAAAAAAAAAAAAAAAA
AT22101.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:34:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15025-RA | 1422 | CG15025-RA | 40..1417 | 1..1380 | 6800 | 99.6 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:44:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 15313469..15314341 | 1377..505 | 4350 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 15314474..15314986 | 506..1 | 2325 | 97.7 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:56:02 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:44:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 19489567..19490442 | 1380..505 | 4350 | 99.8 | Minus |
3R | 32079331 | 3R | 19490574..19491077 | 506..1 | 2450 | 99.4 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:02:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 19230398..19231273 | 1380..505 | 4350 | 99.7 | Minus |
3R | 31820162 | 3R | 19231405..19231908 | 506..1 | 2460 | 99.4 | Minus |
Blast to na_te.dros performed on 2019-03-16 04:44:35 has no hits.
AT22101.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:45:11 Download gff for
AT22101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 15313469..15314339 | 507..1377 | 99 | <- | Minus |
chr3R | 15314474..15314986 | 1..506 | 97 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:17:17 Download gff for
AT22101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15025-RA | 1..1032 | 108..1139 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:57:12 Download gff for
AT22101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15025-RA | 1..1032 | 108..1139 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:41:18 Download gff for
AT22101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15025-RA | 1..1032 | 108..1139 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:21:59 Download gff for
AT22101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15025-RA | 1..1032 | 108..1139 | 99 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:50:15 Download gff for
AT22101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15025-RA | 1..1032 | 108..1139 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:21:42 Download gff for
AT22101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15025-RA | 39..1413 | 1..1377 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:57:12 Download gff for
AT22101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15025-RA | 39..1413 | 1..1377 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:41:18 Download gff for
AT22101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15025-RA | 39..1413 | 1..1377 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:21:59 Download gff for
AT22101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15025-RA | 39..1413 | 1..1377 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:50:15 Download gff for
AT22101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15025-RA | 39..1413 | 1..1377 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:45:11 Download gff for
AT22101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 19489570..19490440 | 507..1377 | 99 | <- | Minus |
3R | 19490574..19491077 | 1..506 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:45:11 Download gff for
AT22101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 19489570..19490440 | 507..1377 | 99 | <- | Minus |
3R | 19490574..19491077 | 1..506 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:45:11 Download gff for
AT22101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 19489570..19490440 | 507..1377 | 99 | <- | Minus |
3R | 19490574..19491077 | 1..506 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:41:18 Download gff for
AT22101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 15315292..15316162 | 507..1377 | 99 | <- | Minus |
arm_3R | 15316296..15316799 | 1..506 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:56:51 Download gff for
AT22101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 19230401..19231271 | 507..1377 | 99 | <- | Minus |
3R | 19231405..19231908 | 1..506 | 99 | | Minus |
AT22101.pep Sequence
Translation from 107 to 1138
> AT22101.pep
MRNSKKDSFREEIGSGTRRPHNSLNDPLNLVDRELSVLLRIPKLKFKSVE
PLPIASRDYGLMKSSNKSSTPYPRAQQGVDASLLKARLIMRTGSDNRNNS
RSERPERPERPDDGSPSISDGSSHRSKTLPKSKPSVSVFRRQSLTRSIKD
IVAVGTPHPKKGVALNPRVLGRRLTDINEMLWKTTDMSEHSMPNLVKPKR
LKGKRKVLLATPAESRESEFLHRPGAPPDGDLVGDGVSPRLTQIDSTLCS
ISEEFQEPQLSFAERRKISQEGEYTIAKYGRKMSDVMMAAPNANQEVDDK
SVRYAKKASLEMERYMRSQGLVKISNDQVTMTRNMARISTQMN*
AT22101.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 03:01:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF18458-PA | 351 | GF18458-PA | 32..317 | 43..339 | 434 | 39 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 03:01:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG15941-PA | 337 | GG15941-PA | 1..327 | 1..340 | 1015 | 62.6 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:48:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15025-PA | 343 | CG15025-PA | 1..343 | 1..343 | 1741 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 03:01:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL11961-PA | 426 | GL11961-PA | 14..373 | 36..333 | 317 | 31.2 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 03:01:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA13443-PB | 432 | GA13443-PB | 14..379 | 36..333 | 319 | 30.8 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 03:01:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM26904-PA | 351 | GM26904-PA | 1..334 | 1..333 | 1479 | 89.1 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 03:01:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD20111-PA | 421 | GD20111-PA | 1..138 | 1..136 | 529 | 85.2 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 03:01:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK13477-PA | 348 | GK13477-PA | 27..312 | 44..339 | 283 | 33 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 03:01:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE25124-PA | 356 | GE25124-PA | 1..337 | 1..343 | 1110 | 64.7 | Plus |
AT22101.hyp Sequence
Translation from 107 to 1138
> AT22101.hyp
MRNSKKDSFREEIGSGTRRPHNSLNDPLNLVDRELSVLLRIPKLKFKSVE
PLPIASRDYGLMKSSNKSSTPYPRAQQGVDASLLKARLIMRTGSDNRNNS
RSERPERPERPDDGSPSISDGSSHRSKTLPKSKPSVSVFRRQSLTRSIKD
IVAVGTPHPKKGVALNPRVLGRRLTDINEMLWKTTDMSEHSMPNLVKPKR
LKGKRKVLLATPAESRESEFLHRPGAPPDGDLVGDGVSPRLTQIDSTLCS
ISEEFQEPQLSFAERRKISQEGEYTIAKYGRKMSDVMMAAPNANQEVDDK
SVRYAKKASLEMERYMRSQGLVKISNDQVTMTRNMARISTQMN*
AT22101.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:10:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15025-PA | 343 | CG15025-PA | 1..343 | 1..343 | 1741 | 100 | Plus |