Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
AT22731.complete Sequence
1090 bp (1090 high quality bases) assembled on 2002-01-18
GenBank Submission: AY089400
> AT22731.complete
GCGCGATCTGGGCGACTGTCACAAGGCGAATCTGGCGGACATCGATATCA
TAGCGCGAACGACCACCAAATGTCAGTTGGGAGGAGAGCAGATGATTTCG
CCAGGCTATCAGAGGTTAGGCCCTTCCTTGGATCGAGTACCAGATGATGA
GGAAACCGACTCACAGGAGGAGGAGATGGAAATACTGCCATGCGGAATGG
GCGAGGAGGGCATAACCACCGATGAGGAGACAAAAACCCTGATTACCATT
CAGGGTCTGGACGAGATATTGAAAAGAATCGATATATTGCGTAGTCAACT
CCGCAGGAATCAGCAATTGGAGGATATTAGCCAACCATCGGTAATGCCAG
AGGATCCGATCTCCTGCAGTGGCCTGAATGCGAAGCAATCGGAGATACGG
TGCATTCAACGTGCCCAGCATCACATTCAGTGCCAACTAACCGAACTCCT
GTGCCGCTACGATGCCCTCCGGAATATGTTGCGCAGTTTGGGCGAAACGT
GGACGTGTCTAGAGCGACGAATTGCCGATATTCGGGGACAGAACCGCGTC
CACTTGGCCTGGACTGAGGAGTGCGCCAACGATCTAAGCAACTGCCAGCA
GAGACATCGCTCCTTGGCCGCCGTCAAGCTTACCAAAAAGATGGCCCTGC
TCGTGACCAAAACGAATATGTCCAGTGGCTTTCGCTATAGCCGTCGATAT
CTACGACATGCCCTGATCGCTCGACATATCAACGACTTTCGCTACGAGAT
CGCCGAGTTGAAGGTTTTAAGCGAGGAAATTTTCTCCGAAATCGATGGGC
GACTGGACCAGATCAAGATGAAGGCTCAACGATTCGGAGTCGTATTCTCG
ACCACGCCGCGTCAATCCAATCTAATCGCCGATGGAACTGGCAACACTGA
GCTAACCGAGCTAACTGATGCCACCGAAACGTTCACCGTTCCAAGGAGCA
ATAATCCAAAATAACAATTTCAAGGGCACATAGAGAAAGCACATTATCAT
TAGGAAATAAAATAGGAAAATCATTAAGTTATAATAAGAGCAAAGAAAAA
TAAATACAAAAATGTAAAATGCAAAAAAAAAAAAAAAAAA
AT22731.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 20:56:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SIP3-RA | 1075 | SIP3-RA | 1..1075 | 1..1075 | 5375 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 08:48:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 4852691..4853762 | 1072..1 | 5360 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:56:28 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 08:48:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 4959926..4961000 | 1075..1 | 5375 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:15:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 4968024..4969098 | 1075..1 | 5375 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 08:48:44 has no hits.
AT22731.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 08:49:25 Download gff for
AT22731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 4852691..4853762 | 1..1072 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:17:57 Download gff for
AT22731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SIP3-RA | 1..873 | 92..964 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:54:40 Download gff for
AT22731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SIP3-RA | 1..873 | 92..964 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:54:14 Download gff for
AT22731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SIP3-RA | 1..873 | 92..964 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:37:12 Download gff for
AT22731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SIP3-RA | 1..873 | 92..964 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:51:52 Download gff for
AT22731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SIP3-RA | 1..873 | 92..964 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:07:39 Download gff for
AT22731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SIP3-RA | 1..1072 | 1..1072 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:54:40 Download gff for
AT22731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SIP3-RA | 1..1072 | 1..1072 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:54:14 Download gff for
AT22731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SIP3-RA | 129..1200 | 1..1072 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:37:13 Download gff for
AT22731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SIP3-RA | 1..1072 | 1..1072 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:51:52 Download gff for
AT22731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SIP3-RA | 129..1200 | 1..1072 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:49:25 Download gff for
AT22731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 4959929..4961000 | 1..1072 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:49:25 Download gff for
AT22731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 4959929..4961000 | 1..1072 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:49:25 Download gff for
AT22731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 4959929..4961000 | 1..1072 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:54:14 Download gff for
AT22731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 4853962..4855033 | 1..1072 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:19:58 Download gff for
AT22731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 4968027..4969098 | 1..1072 | 100 | | Minus |
AT22731.hyp Sequence
Translation from 1 to 963
> AT22731.hyp
RDLGDCHKANLADIDIIARTTTKCQLGGEQMISPGYQRLGPSLDRVPDDE
ETDSQEEEMEILPCGMGEEGITTDEETKTLITIQGLDEILKRIDILRSQL
RRNQQLEDISQPSVMPEDPISCSGLNAKQSEIRCIQRAQHHIQCQLTELL
CRYDALRNMLRSLGETWTCLERRIADIRGQNRVHLAWTEECANDLSNCQQ
RHRSLAAVKLTKKMALLVTKTNMSSGFRYSRRYLRHALIARHINDFRYEI
AELKVLSEEIFSEIDGRLDQIKMKAQRFGVVFSTTPRQSNLIADGTGNTE
LTELTDATETFTVPRSNNPK*
AT22731.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:11:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SIP3-PA | 290 | CG15468-PA | 1..290 | 31..320 | 1494 | 100 | Plus |
CG14556-PB | 334 | CG14556-PB | 11..301 | 2..278 | 205 | 22.6 | Plus |
AT22731.pep Sequence
Translation from 91 to 963
> AT22731.pep
MISPGYQRLGPSLDRVPDDEETDSQEEEMEILPCGMGEEGITTDEETKTL
ITIQGLDEILKRIDILRSQLRRNQQLEDISQPSVMPEDPISCSGLNAKQS
EIRCIQRAQHHIQCQLTELLCRYDALRNMLRSLGETWTCLERRIADIRGQ
NRVHLAWTEECANDLSNCQQRHRSLAAVKLTKKMALLVTKTNMSSGFRYS
RRYLRHALIARHINDFRYEIAELKVLSEEIFSEIDGRLDQIKMKAQRFGV
VFSTTPRQSNLIADGTGNTELTELTDATETFTVPRSNNPK*
AT22731.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:09:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF20335-PA | 332 | GF20335-PA | 66..305 | 19..246 | 437 | 40.4 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:09:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG18510-PA | 334 | GG18510-PA | 57..332 | 1..273 | 1052 | 76.8 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:47:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15468-PA | 290 | CG15468-PA | 1..290 | 1..290 | 1494 | 100 | Plus |
CG14556-PB | 334 | CG14556-PB | 119..301 | 66..248 | 194 | 25.8 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:09:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI21587-PA | 334 | GI21587-PA | 176..313 | 102..239 | 146 | 26.1 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:10:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA13078-PB | 342 | GA13078-PB | 43..308 | 25..249 | 203 | 23.2 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:10:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM12658-PA | 350 | GM12658-PA | 57..350 | 1..290 | 1168 | 80.7 | Plus |
Dsec\GM10308-PA | 509 | GM10308-PA | 180..302 | 101..223 | 170 | 30.2 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:10:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ15807-PA | 341 | GJ15807-PA | 170..320 | 88..242 | 187 | 28.4 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:10:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK24905-PA | 286 | GK24905-PA | 45..275 | 13..248 | 150 | 24.5 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:10:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE16827-PA | 351 | GE16827-PA | 59..350 | 3..290 | 1138 | 76.7 | Plus |
Dyak\GE23656-PA | 521 | GE23656-PA | 162..317 | 66..226 | 164 | 24.2 | Plus |