Clone AT23158 Report

Search the DGRC for AT23158

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:231
Well:58
Vector:pOTB7
Associated Gene/TranscriptCG6091-RD
Protein status:AT23158.pep: gold
Preliminary Size:1950
Sequenced Size:2186

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6091 2003-02-13 Blastp of sequenced clone
CG6091 2008-04-29 Release 5.5 accounting
CG6091 2008-08-15 Release 5.9 accounting
CG6091 2008-12-18 5.12 accounting

Clone Sequence Records

AT23158.complete Sequence

2186 bp (2186 high quality bases) assembled on 2003-02-13

GenBank Submission: BT003803

> AT23158.complete
ATTTTGTTAATACAATAGTTGGCAGTCAGATTTTCAAAATTCAAAATTCT
GGTAAATTTTGCTCAGCATTTAATATCGTCGTTTTTCCGTCTTTTCCACT
AGCACACGCTCGAAGCGTCGCGAACACCACGAAGCGCATGCACACCTTTA
TAAGCGCGATCGTCTGGAGCGCGAGAAACTAGTCCATCCGACGGCAGCGG
CGGGCAGTGGAGCACCTGGTGTATCTGGCAGCAAGTGCAACAGTCCACCG
TCGACCTCAACTTCCGGCAGTAGCAGTCCGTCGGCAGTGGGCCGAAACTC
ACCCGAACACTTGGGACTGGGCTGCACCACGGTGCCCACAGCTCAGGTCC
AGATGTCTACGTCTACGGCGGCCGCCAATTTGCTAAAAACAGTGGAGGAA
ACCTTTTCCGGTTACAATAGCGGCGATGAGCATCATCAGCCCAAAGAGCG
ATTGATTCCAGTGGAAGAGTGGCAGCGACGTGATCTGGAGTTCGCCAAAT
GTATGGAACAGCGCGGCTACGAACTTAAGCCTGTCGAGGAGGATGGCGCC
TGCCTGTTTCGCTCTATATCCCTTCAAATATACGGCGACGAGGAGATGCA
CGACGTGATCCGCCAACACACTATGGATTATATACACGAGAATCGGGAAT
ATTTCGGTCAGTTTGTCACCGAGGACATCAACAGCTATATACAGCGTAAA
CGGGCTCGTGATGCTCATGGCAACCACATTGAGATCCAAGCTATTTCCGA
GATCTACAGCCGTACCGTCGAGGTATACTGCTACCAGTCAAATCCCATCA
ATATATTTAACTCGGAACAGTCGCAGGCGGGTTATCCCCCGCTGCGTTTA
TCCTATCAGCGCGGATCACACTACAATGCTATTCTGGATCCCTACAACGC
CACCGTTGGCGTGGGCCTGGGCTTGGCTGGATACAAGCCCGAGATCCAAA
CCAAAGAGGCTGTGCGTCTCAGCGAGCAGTTGGAGATCGAACAGACCATG
TTTGAAGATAAACTAAAGACAACAGACTGGGAGGCCACTAACGAAGCCAT
TGAGGAGCAAATTGCTCGCGAGTCTTACCTACAGTGGTGTCGCGAGAATA
CGCAACGCTCGCGCAACAGCAATACAGCGGCAGGATCGGCCACATCCTCG
ACGGTTACCTCTGCAGAAGCGCTTACCGACTCCGATGCCTCGCCCTCAAA
ATACTCTGCGTGTGGGGGCACTGGCAGCAGCGGTAATCCACCTGTGGCTT
TGACCAGCGGTAGTGGTGGTGATGGCGCCGGACCCGCGTTTTCGCTGTCG
CCCAAAACACTTAACCAGTTTAGTCACAAGCTACCGCAAGAGGTTAACGA
GCTGGGTGGCTACGATAGCGATGCAACAGACATGAGTAGCACCAGCTCGG
TGGGACACAGCGGTGGCAGTTCATCGCCGAGCACAGCTGCAAGCCAACGT
TCGGGCAAGGGATCCAAGTCTCAACGTCGCGCTACGGCCCTCAGAAAGAA
GCGACGACACGAAACTCGCGAGACGACTTTGGCTAGCAAGAGCGCCGAGG
CTTTAGAGGCTCCGCTGAGGAAGAGTCCAAAGCGCGATTCAGCGCCATCA
GTGGCACGAGCTGACACGCCAGAGGCTGAGCAGCGTCCCTCCACCTCGAA
GCAGTCGTCTCATTCGCCACAGAAGAACGTGGATAGCAAGTCACCTACGG
AGCAGAGTTACTCTAGCTTTTATCAGGAGCTGCTCGAGGCATCCTACGCC
AATGAAGGCGCTAACGAAAGCGAGATGCTGCAGCAAGCCATCCAGATGTC
CACACGCGATTACATGGAGGACCAAAAACGAAAGTTTCTCTTCGGACCGT
AGACGGTGCCGCATGGAAACGCATCGTTCTTTGTACAGTGATTTAGTAGT
TATTTTCGAAAAAGCAAAAAAACATGAAACAGAACTTACCAAAACAAAAA
CGAAATACGAGGAGAAACTACATGCTATAATCGATCTAGAATGTTGATAA
GTGAGCGTGAAGCGAAGTTTGCGATTCGAGCAATGGTCATCGTAGCACAC
CCGCTTTTGCACATTTACATTCTCACATAACACTAACCCTATAAATATCA
TAAACATATATTTTTAATAAGGCCTCGTTGTATAATCATTAGAACCAAAA
TTAAAATGAAGCATAATAAAAAAAAAAAAAAAAAAA

AT23158.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:22:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG6091-RD 2632 CG6091-RD 90..2257 1..2168 10825 99.9 Plus
CG6091-RF 3226 CG6091-RF 756..2823 101..2168 10325 99.9 Plus
CG6091-RG 3338 CG6091-RG 832..2273 101..1542 7195 99.9 Plus
CG6091-RG 3338 CG6091-RG 2336..2963 1541..2168 3140 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:48:10
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 11598565..11599198 634..1 3170 100 Minus
chr3L 24539361 chr3L 11597449..11597998 1542..993 2750 100 Minus
chr3L 24539361 chr3L 11596702..11597113 2167..1756 2060 100 Minus
chr3L 24539361 chr3L 11597169..11597386 1758..1541 1090 100 Minus
chr3L 24539361 chr3L 11598057..11598259 994..792 1015 100 Minus
chr3L 24539361 chr3L 11598348..11598504 791..635 785 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:56:54 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:48:08
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11607652..11608285 634..1 3170 100 Minus
3L 28110227 3L 11606536..11607085 1542..993 2735 99.8 Minus
3L 28110227 3L 11605788..11606200 2168..1756 2065 100 Minus
3L 28110227 3L 11606256..11606473 1758..1541 1090 100 Minus
3L 28110227 3L 11607144..11607346 994..792 1015 100 Minus
3L 28110227 3L 11607435..11607591 791..635 785 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:00:44
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 11600752..11601385 634..1 3170 100 Minus
3L 28103327 3L 11599636..11600185 1542..993 2735 99.8 Minus
3L 28103327 3L 11598888..11599300 2168..1756 2065 100 Minus
3L 28103327 3L 11599356..11599573 1758..1541 1090 100 Minus
3L 28103327 3L 11600244..11600446 994..792 1015 100 Minus
3L 28103327 3L 11600535..11600691 791..635 785 100 Minus
Blast to na_te.dros performed 2019-03-16 16:48:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsub\bilbo 5540 Dsub\bilbo 5540bp Derived from U73803 (Rel. 54, Last updated, Version 1). 2819..2889 2083..2154 114 63.9 Plus

AT23158.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:48:50 Download gff for AT23158.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 11596702..11597111 1758..2167 100 <- Minus
chr3L 11597170..11597384 1543..1757 100 <- Minus
chr3L 11597449..11597996 995..1542 100 <- Minus
chr3L 11598057..11598259 792..994 100 <- Minus
chr3L 11598348..11598504 635..791 100 <- Minus
chr3L 11598565..11599198 1..634 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:18:39 Download gff for AT23158.complete
Subject Subject Range Query Range Percent Splice Strand
CG6091-RF 225..1980 97..1852 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:52:49 Download gff for AT23158.complete
Subject Subject Range Query Range Percent Splice Strand
CG6091-RF 225..1980 97..1852 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:46:43 Download gff for AT23158.complete
Subject Subject Range Query Range Percent Splice Strand
CG6091-RE 225..1980 97..1852 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:43:57 Download gff for AT23158.complete
Subject Subject Range Query Range Percent Splice Strand
CG6091-RF 225..1980 97..1852 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:42:46 Download gff for AT23158.complete
Subject Subject Range Query Range Percent Splice Strand
CG6091-RE 225..1980 97..1852 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:06:59 Download gff for AT23158.complete
Subject Subject Range Query Range Percent Splice Strand
CG6091-RD 1..2167 1..2167 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:52:49 Download gff for AT23158.complete
Subject Subject Range Query Range Percent Splice Strand
CG6091-RD 1..2167 1..2167 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:46:43 Download gff for AT23158.complete
Subject Subject Range Query Range Percent Splice Strand
CG6091-RD 1..2167 1..2167 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:43:57 Download gff for AT23158.complete
Subject Subject Range Query Range Percent Splice Strand
CG6091-RD 1..2167 1..2167 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:42:46 Download gff for AT23158.complete
Subject Subject Range Query Range Percent Splice Strand
CG6091-RD 1..2167 1..2167 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:48:50 Download gff for AT23158.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11607144..11607346 792..994 100 <- Minus
3L 11605789..11606198 1758..2167 100 <- Minus
3L 11606257..11606471 1543..1757 100 <- Minus
3L 11606536..11607083 995..1542 99 <- Minus
3L 11607435..11607591 635..791 100 <- Minus
3L 11607652..11608285 1..634 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:48:50 Download gff for AT23158.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11607144..11607346 792..994 100 <- Minus
3L 11605789..11606198 1758..2167 100 <- Minus
3L 11606257..11606471 1543..1757 100 <- Minus
3L 11606536..11607083 995..1542 99 <- Minus
3L 11607435..11607591 635..791 100 <- Minus
3L 11607652..11608285 1..634 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:48:50 Download gff for AT23158.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11607144..11607346 792..994 100 <- Minus
3L 11605789..11606198 1758..2167 100 <- Minus
3L 11606257..11606471 1543..1757 100 <- Minus
3L 11606536..11607083 995..1542 99 <- Minus
3L 11607435..11607591 635..791 100 <- Minus
3L 11607652..11608285 1..634 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:46:43 Download gff for AT23158.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11598889..11599298 1758..2167 100 <- Minus
arm_3L 11599357..11599571 1543..1757 100 <- Minus
arm_3L 11599636..11600183 995..1542 99 <- Minus
arm_3L 11600244..11600446 792..994 100 <- Minus
arm_3L 11600535..11600691 635..791 100 <- Minus
arm_3L 11600752..11601385 1..634 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:14:46 Download gff for AT23158.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11598889..11599298 1758..2167 100 <- Minus
3L 11599357..11599571 1543..1757 100 <- Minus
3L 11599636..11600183 995..1542 99 <- Minus
3L 11600244..11600446 792..994 100 <- Minus
3L 11600535..11600691 635..791 100 <- Minus
3L 11600752..11601385 1..634 100   Minus

AT23158.pep Sequence

Translation from 352 to 1851

> AT23158.pep
MSTSTAAANLLKTVEETFSGYNSGDEHHQPKERLIPVEEWQRRDLEFAKC
MEQRGYELKPVEEDGACLFRSISLQIYGDEEMHDVIRQHTMDYIHENREY
FGQFVTEDINSYIQRKRARDAHGNHIEIQAISEIYSRTVEVYCYQSNPIN
IFNSEQSQAGYPPLRLSYQRGSHYNAILDPYNATVGVGLGLAGYKPEIQT
KEAVRLSEQLEIEQTMFEDKLKTTDWEATNEAIEEQIARESYLQWCRENT
QRSRNSNTAAGSATSSTVTSAEALTDSDASPSKYSACGGTGSSGNPPVAL
TSGSGGDGAGPAFSLSPKTLNQFSHKLPQEVNELGGYDSDATDMSSTSSV
GHSGGSSSPSTAASQRSGKGSKSQRRATALRKKRRHETRETTLASKSAEA
LEAPLRKSPKRDSAPSVARADTPEAEQRPSTSKQSSHSPQKNVDSKSPTE
QSYSSFYQELLEASYANEGANESEMLQQAIQMSTRDYMEDQKRKFLFGP*

AT23158.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 07:51:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24533-PA 649 GF24533-PA 153..649 1..499 2276 85.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 07:51:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13906-PA 659 GG13906-PA 161..659 1..499 2475 95.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 07:51:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16633-PA 698 GH16633-PA 172..698 6..499 1964 76.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:32:28
Subject Length Description Subject Range Query Range Score Percent Strand
Duba-PF 659 CG6091-PF 161..659 1..499 2570 100 Plus
Duba-PE 659 CG6091-PE 161..659 1..499 2570 100 Plus
Duba-PD 499 CG6091-PD 1..499 1..499 2570 100 Plus
Duba-PG 568 CG6091-PG 161..556 1..396 2052 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 07:51:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11590-PA 671 GI11590-PA 164..671 1..499 2084 79.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 07:51:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22812-PA 640 GL22812-PA 162..640 4..499 1989 78.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 07:51:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19344-PA 640 GA19344-PA 162..640 4..499 1983 78.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 07:51:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24732-PA 659 GM24732-PA 161..659 1..499 2645 98.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 07:51:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12791-PA 659 GD12791-PA 161..659 1..499 2647 98.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 07:51:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11269-PA 671 GJ11269-PA 170..671 9..499 2020 81.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 07:51:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17016-PA 678 GK17016-PA 164..678 1..499 1885 73.3 Plus
Dwil\GK17017-PA 546 GK17017-PA 249..430 15..196 470 46.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 07:51:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20197-PA 659 GE20197-PA 161..659 1..499 2480 95.2 Plus

AT23158.hyp Sequence

Translation from 352 to 1851

> AT23158.hyp
MSTSTAAANLLKTVEETFSGYNSGDEHHQPKERLIPVEEWQRRDLEFAKC
MEQRGYELKPVEEDGACLFRSISLQIYGDEEMHDVIRQHTMDYIHENREY
FGQFVTEDINSYIQRKRARDAHGNHIEIQAISEIYSRTVEVYCYQSNPIN
IFNSEQSQAGYPPLRLSYQRGSHYNAILDPYNATVGVGLGLAGYKPEIQT
KEAVRLSEQLEIEQTMFEDKLKTTDWEATNEAIEEQIARESYLQWCRENT
QRSRNSNTAAGSATSSTVTSAEALTDSDASPSKYSACGGTGSSGNPPVAL
TSGSGGDGAGPAFSLSPKTLNQFSHKLPQEVNELGGYDSDATDMSSTSSV
GHSGGSSSPSTAASQRSGKGSKSQRRATALRKKRRHETRETTLASKSAEA
LEAPLRKSPKRDSAPSVARADTPEAEQRPSTSKQSSHSPQKNVDSKSPTE
QSYSSFYQELLEASYANEGANESEMLQQAIQMSTRDYMEDQKRKFLFGP*

AT23158.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:12:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG6091-PF 659 CG6091-PF 161..659 1..499 2570 100 Plus
CG6091-PE 659 CG6091-PE 161..659 1..499 2570 100 Plus
CG6091-PD 499 CG6091-PD 1..499 1..499 2570 100 Plus
CG6091-PG 568 CG6091-PG 161..556 1..396 2052 100 Plus