AT23419.complete Sequence
998 bp (998 high quality bases) assembled on 2002-04-21
GenBank Submission: AY113295
> AT23419.complete
TGACACAAGACACAATAAATAAAACTAGGGTGCGCTAAAAGCAGAACGAA
GGAAACTAGAACGACTACAACTTATGCTACGCAGAGGGTAAAATTCGGGA
ATTCAGTAGGTCAGCCAGTGTTCATTCCAGCTCCTGCTGAACCTAAACAT
TTAGCACGGAATGCTTCTTATTGCCGCCGGAGGGCAGTTGCACGGCGATC
ACCGCCAAGCGTCCATCTCGAAGCGGCGCCAGAATGTGGGTGTTGCCCGG
AGTGACCACCACCGTCTGGATGGGCACGTGCAGGGGAATGTCGAAAACGG
GCTTCAAGCTGGAAAAGAAGAAGTCTGCTCATGGTGATATCGCCGGCATC
GTCGGCCACCACCAGGTAGTCGGAGGCACTAGCCAATCCCGTCACCCTGC
CAGAAACGTATTTGGAGCCCAGACTGCAGCCGTTGATGCTGTACACGTGC
ACCGAGTGCGAGGTGTCATCCAGAGCACTGAATGCAATGTGACCTGTGTG
TAAAGGATACAGAAAAGAAGAGCAATCAGAATTGTGGTTCAATCATGTGA
AGCATTCTTTGATCATATCAGCTCAGATGACAGAATGTGGGGCAGGGCGT
AGTGGCGTTAATCTACGCAGTGGAAATGCCATTATGCTATTAGACGAGGT
CCGGCCCACTCTGGTCTGCTGATAACCTGACATCGCATAAAAACATTATC
ACATGGCGACATACTACATACTACAAGTCCGAGCAATGCGTAGTTGCTCT
TATCTACACAAGTATCCGTGTTATGTGGCGGCACTTGTATCTCTGCATCT
GTAAATGTATCTGTATGCCAATGCCACCCAGCGAAACGCGTTCAGAAGGA
AGAGCCACTAAATAGCCTAGATTGGATCTGAATGAACTTCCTAAAGTGAC
CCGGCCACGCGCACAGAAATAACTAGTATAAACCGTGCCCAGTTGGTTTT
GGCCAATCTTGTACGAGTAGTTCATTCAACAAAAAAAAAAAAAAAAAA
AT23419.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:14:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32252-RA | 995 | CG32252-RA | 1..988 | 1..988 | 4940 | 100 | Plus |
CG1332-RA | 4102 | CG1332-RA | 2524..2832 | 309..1 | 1545 | 100 | Minus |
CG1332-RA | 4102 | CG1332-RA | 2346..2518 | 494..322 | 865 | 100 | Minus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:49:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 4221090..4221748 | 980..322 | 3295 | 100 | Minus |
chr3L | 24539361 | chr3L | 4221798..4222120 | 323..1 | 1615 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:57:11 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:49:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4221696..4222362 | 988..322 | 3335 | 100 | Minus |
3L | 28110227 | 3L | 4222412..4222734 | 323..1 | 1615 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:44:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 4221696..4222362 | 988..322 | 3335 | 100 | Minus |
3L | 28103327 | 3L | 4222412..4222734 | 323..1 | 1615 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 16:49:07 has no hits.
AT23419.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:50:13 Download gff for
AT23419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 4221090..4221746 | 324..980 | 100 | <- | Minus |
chr3L | 4221798..4222120 | 1..323 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:19:07 Download gff for
AT23419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32252-RA | 1..270 | 234..503 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:00:47 Download gff for
AT23419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32252-RA | 1..270 | 234..503 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:54:09 Download gff for
AT23419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32252-RA | 1..270 | 234..503 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:41:58 Download gff for
AT23419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32252-RA | 1..980 | 1..980 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:00:47 Download gff for
AT23419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32252-RA | 1..980 | 1..980 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:47:12 Download gff for
AT23419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43367-RD | 8081..8573 | 1..502 | 97 | | Minus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:54:09 Download gff for
AT23419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32252-RA | 1..980 | 1..980 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:43:25 Download gff for
AT23419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43367-RD | 8081..8573 | 1..502 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:50:13 Download gff for
AT23419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4221704..4222360 | 324..980 | 100 | <- | Minus |
3L | 4222412..4222734 | 1..323 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:50:13 Download gff for
AT23419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4221704..4222360 | 324..980 | 100 | <- | Minus |
3L | 4222412..4222734 | 1..323 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:50:13 Download gff for
AT23419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4221704..4222360 | 324..980 | 100 | <- | Minus |
3L | 4222412..4222734 | 1..323 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:47:12 Download gff for
AT23419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4221704..4222360 | 324..980 | 100 | <- | Minus |
arm_3L | 4222412..4222734 | 1..323 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:47:12 Download gff for
AT23419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4221704..4222360 | 324..980 | 100 | <- | Minus |
arm_3L | 4222412..4222734 | 1..323 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:26:19 Download gff for
AT23419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4221704..4222360 | 324..980 | 100 | <- | Minus |
3L | 4222412..4222734 | 1..323 | 100 | | Minus |
AT23419.hyp Sequence
Translation from 233 to 502
> AT23419.hyp
MWVLPGVTTTVWMGTCRGMSKTGFKLEKKKSAHGDIAGIVGHHQVVGGTS
QSRHPARNVFGAQTAAVDAVHVHRVRGVIQSTECNVTCV*
Sequence AT23419.hyp has no blast hits.
AT23419.pep Sequence
Translation from 233 to 502
> AT23419.pep
MWVLPGVTTTVWMGTCRGMSKTGFKLEKKKSAHGDIAGIVGHHQVVGGTS
QSRHPARNVFGAQTAAVDAVHVHRVRGVIQSTECNVTCV*
AT23419.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:49:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG16623-PA | 27 | GG16623-PA | 1..27 | 1..27 | 137 | 96.3 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:49:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL12729-PA | 184 | GL12729-PA | 1..32 | 1..32 | 147 | 81.2 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:49:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA16789-PA | 332 | GA16789-PA | 265..321 | 31..87 | 194 | 59.6 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:49:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM13996-PA | 88 | GM13996-PA | 1..87 | 1..88 | 425 | 95.5 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:49:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD13277-PA | 88 | GD13277-PA | 1..87 | 1..88 | 416 | 93.2 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:49:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ12565-PA | 94 | GJ12565-PA | 1..86 | 1..88 | 243 | 68.2 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:49:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE20633-PA | 89 | GE20633-PA | 1..88 | 1..88 | 377 | 80.7 | Plus |