Clone AT23634 Report

Search the DGRC for AT23634

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:236
Well:34
Vector:pOTB7
Associated Gene/TranscriptCG10326-RA
Protein status:AT23634.pep: gold
Preliminary Size:1145
Sequenced Size:1304

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10326 2002-01-01 Sim4 clustering to Release 2
CG10326 2002-03-20 Blastp of sequenced clone
CG10326 2003-01-01 Sim4 clustering to Release 3
CG10326 2008-04-29 Release 5.5 accounting
CG10326 2008-08-15 Release 5.9 accounting
CG10326 2008-12-18 5.12 accounting

Clone Sequence Records

AT23634.complete Sequence

1304 bp (1304 high quality bases) assembled on 2002-03-20

GenBank Submission: AY094659

> AT23634.complete
TAGCCAAATCAATACAAGATTTTTAATACAAACTTTTAAAACAGAGTTGT
AAAGGGAAAAATTCGATAAGTTCCGATTGAAAGTGCAATCGCTGTTTGAG
TGAAACAACCCCTGAATCAGTCATTTCAAAACGTCGATCAACGGTCACAC
TGCGACTTTGGCGACTTAAAAAACACCCAAGAAAATTGATTTTTCGCTCA
AACCGAAAGCAACACCTTTGGGCATCAAATAGATTTCTCGGAATTGAACG
CGCACCGCTAGGAAACAAAGAAAAGCCAGCATGGCAGCATCGCAGGTTGA
CCAGAAACGAGCACTTAACAAATTAAAGCACGACTTGGAGCCTTTCCGGA
CAGCCATCGTGGGAGCGTACGGCGTGCTAACCTGGGAGAAGCAGTACTAC
GCCGGAGTGGTGTTTGGCGTCATCAGCTGCCTGTACCTGGTGCTGTGGTA
CCTGGACTTGTCGCTGATTACCCTGCTGTCGCTGCTCGGTGTCATTAGCA
TTTTGCTGAACTACGCATTCCCCATGGTGTCGCGCCTGATCTTTGGCGGA
GTCAACTGGGATGGCGACCAGGAGGCCAAGTTCGAGGACGTGTGCGGCCA
GGTGTGCGCCGTCAAGGGCAGCCTGGTGGTCTGGTACGAGTACCTCTTCA
ACGAGCGGAAGTCCACAGTGTTTGTAATCGTCATGAGTTTGGGTCTTTTG
GCTATGGCCTGGATTGGAGCCATCATTAACAATCTACTGCTTATGTACTT
GGCCACCCTACTCATCCTCATGTGGCCAGGACTACAGAACAAGGACATTT
TTAAGGCCATCACCCAAAGGGCCTCGAAGATTATTAACGAGAAGATCCAG
TGCGGCAAAAGGAAGCTGCAGTAAAGGAAAGCAACCAGATAAACTCATCA
CCATTTGACCAAAAATATAAAACATGCCTAAGTCATCTACTTGCCATTAT
GCACACATCGCATCACTAAATCACACATTAGGCGCATTGAATTTGAAACT
ATAAATATCTTAAAAGATAAGAGCAGCGCATACAGAGTATTCTCATCGGA
AAACTAGCAAATCCGTGGTTCTGGCCCCATCACATCTCCTACTATAAGTT
TGTAACATGTAAGACAGAAGTATTCTCGAAACGAGGCGTACGGAGAGAGA
AAAAAACGCGCAACAAAAGACAAGGCATTTTTGTGATTATTTTGTGAGTT
AATTGAAATTTATGATAATCCCAAGTAAGATAAAAAAAGGAACTTAAGCG
TCTAATGAACTATATTTAAATAAAGATTTCAACTGAATAGATCAAAAAAA
AAAA

AT23634.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:20:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG10326-RA 1370 CG10326-RA 40..1075 1..1036 5180 100 Plus
CG10326-RA 1370 CG10326-RA 1086..1335 1046..1295 1235 99.6 Plus
CG10324-RA 2110 CG10324-RA 1723..1972 1295..1046 1235 99.6 Minus
CG10324-RA 2110 CG10324-RA 1983..2110 1036..909 640 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:49:27
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 12469109..12469733 670..1293 2955 98.6 Plus
chr3R 27901430 chr3R 12468576..12468945 301..670 1850 100 Plus
chr3R 27901430 chr3R 12468167..12468470 1..304 1520 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:57:26 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:49:25
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16644547..16645173 670..1295 2965 98.6 Plus
3R 32079331 3R 16644014..16644383 301..670 1850 100 Plus
3R 32079331 3R 16643605..16643908 1..304 1520 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:50:01
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 16384845..16385214 301..670 1850 100 Plus
3R 31820162 3R 16385378..16385744 670..1036 1835 100 Plus
3R 31820162 3R 16384436..16384739 1..304 1520 100 Plus
3R 31820162 3R 16385755..16386004 1046..1295 1235 99.6 Plus
Blast to na_te.dros performed on 2019-03-16 16:49:25 has no hits.

AT23634.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:50:22 Download gff for AT23634.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 12468167..12468470 1..304 100 -> Plus
chr3R 12468580..12468945 305..670 100 -> Plus
chr3R 12469110..12469733 671..1293 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:19:29 Download gff for AT23634.complete
Subject Subject Range Query Range Percent Splice Strand
CG10326-RA 1..594 281..874 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:27:00 Download gff for AT23634.complete
Subject Subject Range Query Range Percent Splice Strand
CG10326-RA 1..594 281..874 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:47:29 Download gff for AT23634.complete
Subject Subject Range Query Range Percent Splice Strand
CG10326-RA 1..594 281..874 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:02:02 Download gff for AT23634.complete
Subject Subject Range Query Range Percent Splice Strand
CG10326-RA 1..594 281..874 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:44:01 Download gff for AT23634.complete
Subject Subject Range Query Range Percent Splice Strand
CG10326-RA 1..594 281..874 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:53:36 Download gff for AT23634.complete
Subject Subject Range Query Range Percent Splice Strand
CG10326-RA 1..1288 1..1287 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:27:00 Download gff for AT23634.complete
Subject Subject Range Query Range Percent Splice Strand
CG10326-RA 1..1288 1..1287 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:47:29 Download gff for AT23634.complete
Subject Subject Range Query Range Percent Splice Strand
CG10326-RA 1..1294 1..1293 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:02:02 Download gff for AT23634.complete
Subject Subject Range Query Range Percent Splice Strand
CG10326-RA 1..1288 1..1287 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:44:01 Download gff for AT23634.complete
Subject Subject Range Query Range Percent Splice Strand
CG10326-RA 1..1294 1..1293 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:50:22 Download gff for AT23634.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16643605..16643908 1..304 100 -> Plus
3R 16644018..16644383 305..670 100 -> Plus
3R 16644548..16645171 671..1293 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:50:22 Download gff for AT23634.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16643605..16643908 1..304 100 -> Plus
3R 16644018..16644383 305..670 100 -> Plus
3R 16644548..16645171 671..1293 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:50:22 Download gff for AT23634.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16643605..16643908 1..304 100 -> Plus
3R 16644018..16644383 305..670 100 -> Plus
3R 16644548..16645171 671..1293 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:47:29 Download gff for AT23634.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12469327..12469630 1..304 100 -> Plus
arm_3R 12469740..12470105 305..670 100 -> Plus
arm_3R 12470270..12470893 671..1293 98   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:35:16 Download gff for AT23634.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16384436..16384739 1..304 100 -> Plus
3R 16384849..16385214 305..670 100 -> Plus
3R 16385379..16386002 671..1293 98   Plus

AT23634.pep Sequence

Translation from 280 to 873

> AT23634.pep
MAASQVDQKRALNKLKHDLEPFRTAIVGAYGVLTWEKQYYAGVVFGVISC
LYLVLWYLDLSLITLLSLLGVISILLNYAFPMVSRLIFGGVNWDGDQEAK
FEDVCGQVCAVKGSLVVWYEYLFNERKSTVFVIVMSLGLLAMAWIGAIIN
NLLLMYLATLLILMWPGLQNKDIFKAITQRASKIINEKIQCGKRKLQ*

AT23634.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 21:57:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17066-PA 197 GF17066-PA 1..197 1..197 778 84.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 21:57:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21774-PA 197 GG21774-PA 1..197 1..197 819 93.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 21:57:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18158-PA 197 GH18158-PA 1..197 1..197 715 69 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:24:45
Subject Length Description Subject Range Query Range Score Percent Strand
Arl6IP1-PB 197 CG10326-PB 1..197 1..197 1011 100 Plus
Arl6IP1-PA 197 CG10326-PB 1..197 1..197 1011 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 21:57:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10111-PA 197 GI10111-PA 1..197 1..197 721 69 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 21:57:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24526-PA 197 GL24526-PA 1..197 1..197 778 76.1 Plus
Dper\GL19922-PA 188 GL19922-PA 1..187 1..177 446 56.7 Plus
Dper\GL19800-PA 188 GL19800-PA 1..187 1..177 442 56.1 Plus
Dper\GL19921-PA 188 GL19921-PA 1..187 1..177 442 56.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 21:57:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10246-PA 197 GA10246-PA 1..197 1..197 779 76.1 Plus
Dpse\GA28418-PA 190 GA28418-PA 1..190 1..175 442 53.7 Plus
Dpse\GA27196-PA 177 GA27196-PA 1..177 1..175 409 56.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 21:57:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15180-PA 197 GM15180-PA 1..197 1..197 923 94.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 21:57:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23333-PA 197 GJ23333-PA 1..197 1..197 722 69 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 21:57:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13434-PA 197 GK13434-PA 1..197 1..197 728 70.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 21:57:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24586-PA 197 GE24586-PA 1..197 1..197 817 92.9 Plus

AT23634.hyp Sequence

Translation from 280 to 873

> AT23634.hyp
MAASQVDQKRALNKLKHDLEPFRTAIVGAYGVLTWEKQYYAGVVFGVISC
LYLVLWYLDLSLITLLSLLGVISILLNYAFPMVSRLIFGGVNWDGDQEAK
FEDVCGQVCAVKGSLVVWYEYLFNERKSTVFVIVMSLGLLAMAWIGAIIN
NLLLMYLATLLILMWPGLQNKDIFKAITQRASKIINEKIQCGKRKLQ*

AT23634.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:12:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG10326-PB 197 CG10326-PB 1..197 1..197 1011 100 Plus
CG10326-PA 197 CG10326-PB 1..197 1..197 1011 100 Plus