BDGP Sequence Production Resources |
Search the DGRC for AT24188
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 241 |
Well: | 88 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG5327-RA |
Protein status: | AT24188.pep: gold |
Preliminary Size: | 483 |
Sequenced Size: | 2153 |
Gene | Date | Evidence |
---|---|---|
CG5327 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5327 | 2002-02-22 | Blastp of sequenced clone |
CG5327 | 2008-04-29 | Release 5.5 accounting |
CG5327 | 2008-08-15 | Release 5.9 accounting |
CG5327 | 2008-12-18 | 5.12 accounting |
2153 bp (2153 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089418
> AT24188.complete CCGAAAACTGTCAATTCAACATTTTGTTTTGTTCTTTCGAAATTGTTCAA ATTTTAAATTGAAATGGTGGAGCAACAAAAAAAGCGCTTGGAGGGCGCCA TTAGCGAAATGATCGAGGACATGTACCGCACCCACTTGCGCAGAATGCAG TCCACGATGCACCGCTGTGCCGCCCGCTGCTGCGACGATGATCGAGGGAC GCTGGAGAGCGTACAGAACTGCATCGAGAAGTGCGCCGGTCCCCTGATGG ATGCCCAGGATTTCCTGCAGCACGAGCTGGGCCAATTCCAGAATAGACTT CAAAACTGCGTTAGGGATTGCAACAGCGATGCGCGGTCTCAGATGCCCAG CAATCCGAGTGACCGGGACATGTCCCGATCCCAGCACATGTTTGAGAGTT GCACGAACAACTGTGTGGACAAGTACATAAACCTGATACCTGGTCTGCTC AAGTCGATCAAACAAACATTGGACAGGGGTCCGCCGAAAAGATCACGCAA CATGGATGTCTAACCGGGATGGAATTCAGGATTTGGTGACATTTAAAAAA GCACATTCAAGCAGTTGTCAATGGTTCACTTATTTATTGAATATTTTTGG TACAGCTAACACTTAAAGTACACTAATCGCTGCTGTGATCCGGGATAGCC AATGGATTGGAATGGGAACTTATCAGCGCCAACGTGGCCCTTGCTCGCCA TGTTTGATAGCTCAGCTCCCGGATCTTCTTAGGCCCTAGCTCATTAAATA TCTAGTAATAAAGATTCTTAGTATTATGCAACAATACGAGAGGCTATATT TTTAGGATCTTGATGGATCTACTGCTCGTTCTGCTTCGTCCTCACGCCGT ATTTGCTCCAGAAGGTGACCTTGGCGGTGGTCTTCTTCAGGTTGTCCTGG AACACGGAGCACGTGTCGAAGGGTGGACAGTATAGGTGAAGAGAGACAGA GGTATCCGAATGGCTGGGGTTCTCCACGCGATGCAGACCCAGATTGTCTA TGGATAACAAAACGAAAAAAAAAACAGCCACATCATTGACGGCGATTGGT GTCTCCCCAATCTCCACCAGCTCTCGGCTATCGATCTCGCCATCCGGATG ATGGGACCGGCCGTTGTCCCTGGCAGATCTATTGGGATACTCGTAGCGCT TCTCGCGCAGATCACCCTTCAGCATCTTCATGAAGCAATGGGAATCGGCA TGGTCGTGCACCGAGGAGCCGTGTCCTTCGCCCCAGCACAAAATCAGAAG ATTGAACTTTCCATTGCCAGCATCCACGAGATTCCGCGTGTAGGTGTAAC GATCGAACTTGGCATATTTGCGCCACTCCCGCGGATTGGACTTGTAGCTG AGCATAAGGTGATTCACCATCTCGATGTTAACATAGTTCGACTCGAATTC CCGGTGAAGTGCGGCCACCAAGTCCGATAGGGAATTCACCTCCGGTCCGT ATTTCAGGGGTTTCTCCAGCGGCTGATAGTAGCTAGTGGCCTGACGCAGG TACTTCTCCTGGTCAACCTGCTCGATCTCGGTGTCGATCTTGGACAGGGC CATTTTGGGCTTGCTCTGATTGACCTAGGTTGCGAAAAGGGAAGCGGAAG TTAGAGTGGTGGTGCATCAGTTGAGGCTGAAGGGCGTGGAAAACTACCTA TAAAGTCTATAAAGATCACTGCTCAATTGATTTAGATGAATTACGTTGTA AAGTCGATGATCGCTGATAATAGCTATTGGTATATATATATATGAATATT CCGATTCGTTGCTGTTACAATTGATTGAATTGCTTCGACTAACCGCACAC GCTCCACCTCGGATCGCAAAATTCGAACTGAATTCTGGAGATTTCGCTCT CCTGTCCAGGCTGCATAATCAGCTCGGATCCGACGTAAATCGGAGGCGCA AGTCCAAAGCAATAACAAAAACAAGAAGTCGCCGGCGATAACCGTCCATC CAACTTATCAATAGCAGATTTTACCAATACCCTCGGCTATATAATACACG TATTTCTCAGTAGATGATGATAGATCGAATGTTGCCAGGAGGGGCTCAAC AGATGTGCCTGAATTTGAGACAAGAGGTTAACGGCGATCTAATGGGATCG TTTGGCAAATAAAAAACAAATTTATTCCACAATAAAAAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5327-RA | 2137 | CG5327-RA | 1..2137 | 1..2134 | 10465 | 99.3 | Plus |
CG5493-RA | 1169 | CG5493-RA | 179..729 | 1577..1027 | 2695 | 99.2 | Minus |
CG5493.a | 1059 | CG5493.a | 69..617 | 1575..1027 | 2685 | 99.2 | Minus |
CG5493.a | 1059 | CG5493.a | 628..1059 | 998..567 | 2145 | 99.7 | Minus |
CG5493-RA | 1169 | CG5493-RA | 740..1169 | 998..569 | 2135 | 99.7 | Minus |
CG5493-RA | 1169 | CG5493-RA | 1..183 | 1828..1646 | 915 | 100 | Minus |
CG5493.a | 1059 | CG5493.a | 1..71 | 1862..1792 | 355 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 14504334..14505441 | 1027..2133 | 5265 | 98.6 | Plus |
chr2R | 21145070 | chr2R | 14503563..14504272 | 315..1024 | 3475 | 99.3 | Plus |
chr2R | 21145070 | chr2R | 14503318..14503485 | 149..316 | 840 | 100 | Plus |
chr2R | 21145070 | chr2R | 14503111..14503260 | 1..150 | 750 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 18617211..18618318 | 1027..2134 | 5465 | 99.5 | Plus |
2R | 25286936 | 2R | 18616440..18617149 | 315..1024 | 3475 | 99.3 | Plus |
2R | 25286936 | 2R | 18616195..18616362 | 149..316 | 840 | 100 | Plus |
2R | 25286936 | 2R | 18615988..18616137 | 1..150 | 750 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 18618410..18619517 | 1027..2134 | 5465 | 99.5 | Plus |
2R | 25260384 | 2R | 18617639..18618348 | 315..1024 | 3475 | 99.2 | Plus |
2R | 25260384 | 2R | 18617394..18617561 | 149..316 | 840 | 100 | Plus |
2R | 25260384 | 2R | 18617187..18617336 | 1..150 | 750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 14503111..14503260 | 1..150 | 100 | -> | Plus |
chr2R | 14503320..14503484 | 151..315 | 100 | -> | Plus |
chr2R | 14503564..14504277 | 316..1026 | 98 | -> | Plus |
chr2R | 14504334..14505441 | 1027..2133 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5327-RA | 1..450 | 64..513 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5327-RA | 1..450 | 64..513 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5327-RA | 1..450 | 64..513 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5327-RA | 1..450 | 64..513 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5327-RA | 1..450 | 64..513 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5327-RA | 1..2136 | 1..2133 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5327-RA | 1..2136 | 1..2133 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5327-RA | 1..2136 | 1..2133 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5327-RA | 1..2136 | 1..2133 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5327-RA | 1..2136 | 1..2133 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18616197..18616361 | 151..315 | 100 | -> | Plus |
2R | 18615988..18616137 | 1..150 | 100 | -> | Plus |
2R | 18616441..18617154 | 316..1026 | 98 | -> | Plus |
2R | 18617211..18618317 | 1027..2133 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18616197..18616361 | 151..315 | 100 | -> | Plus |
2R | 18615988..18616137 | 1..150 | 100 | -> | Plus |
2R | 18616441..18617154 | 316..1026 | 98 | -> | Plus |
2R | 18617211..18618317 | 1027..2133 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18616197..18616361 | 151..315 | 100 | -> | Plus |
2R | 18615988..18616137 | 1..150 | 100 | -> | Plus |
2R | 18616441..18617154 | 316..1026 | 98 | -> | Plus |
2R | 18617211..18618317 | 1027..2133 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 14503493..14503642 | 1..150 | 100 | -> | Plus |
arm_2R | 14503702..14503866 | 151..315 | 100 | -> | Plus |
arm_2R | 14503946..14504659 | 316..1026 | 98 | -> | Plus |
arm_2R | 14504716..14505822 | 1027..2133 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18617640..18618353 | 316..1026 | 98 | -> | Plus |
2R | 18618410..18619516 | 1027..2133 | 99 | Plus | |
2R | 18617187..18617336 | 1..150 | 100 | -> | Plus |
2R | 18617396..18617560 | 151..315 | 100 | -> | Plus |
Translation from 63 to 512
> AT24188.pep MVEQQKKRLEGAISEMIEDMYRTHLRRMQSTMHRCAARCCDDDRGTLESV QNCIEKCAGPLMDAQDFLQHELGQFQNRLQNCVRDCNSDARSQMPSNPSD RDMSRSQHMFESCTNNCVDKYINLIPGLLKSIKQTLDRGPPKRSRNMDV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11975-PA | 153 | GF11975-PA | 1..147 | 1..147 | 699 | 87.8 | Plus |
Dana\GF11974-PA | 146 | GF11974-PA | 1..140 | 1..140 | 423 | 48.6 | Plus |
Dana\GF19183-PA | 134 | GF19183-PA | 8..133 | 2..139 | 242 | 34.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21910-PA | 149 | GG21910-PA | 1..149 | 1..149 | 789 | 99.3 | Plus |
Dere\GG21909-PA | 146 | GG21909-PA | 1..140 | 1..140 | 419 | 47.9 | Plus |
Dere\GG19017-PA | 131 | GG19017-PA | 9..130 | 3..139 | 191 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20301-PA | 148 | GH20301-PA | 1..144 | 1..144 | 617 | 77.1 | Plus |
Dgri\GH25050-PA | 148 | GH25050-PA | 1..144 | 1..144 | 617 | 77.1 | Plus |
Dgri\GH20300-PA | 146 | GH20300-PA | 1..140 | 1..140 | 410 | 46.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5327-PA | 149 | CG5327-PA | 1..149 | 1..149 | 800 | 100 | Plus |
CG5323-PA | 146 | CG5323-PA | 1..140 | 1..140 | 424 | 47.1 | Plus |
CG12661-PB | 131 | CG12661-PB | 8..130 | 2..139 | 260 | 32.6 | Plus |
CG12661-PA | 131 | CG12661-PA | 8..130 | 2..139 | 260 | 32.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19971-PA | 154 | GI19971-PA | 1..144 | 1..144 | 618 | 77.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17028-PA | 153 | GL17028-PA | 1..144 | 1..144 | 687 | 85.4 | Plus |
Dper\GL17027-PA | 146 | GL17027-PA | 1..140 | 1..140 | 424 | 48.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18807-PA | 153 | GA18807-PA | 1..144 | 1..144 | 688 | 86.1 | Plus |
Dpse\GA18804-PA | 146 | GA18804-PA | 1..140 | 1..140 | 424 | 48.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21901-PA | 149 | GM21901-PA | 1..149 | 1..149 | 771 | 96.6 | Plus |
Dsec\GM21900-PA | 146 | GM21900-PA | 1..140 | 1..140 | 421 | 47.9 | Plus |
Dsec\GM13692-PA | 131 | GM13692-PA | 9..130 | 3..139 | 195 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11397-PA | 149 | GD11397-PA | 1..149 | 1..149 | 771 | 96.6 | Plus |
Dsim\GD11396-PA | 146 | GD11396-PA | 1..140 | 1..140 | 421 | 47.9 | Plus |
Dsim\GD16092-PA | 131 | GD16092-PA | 9..130 | 3..139 | 198 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21220-PA | 154 | GJ21220-PA | 1..144 | 1..144 | 620 | 76.4 | Plus |
Dvir\GJ21219-PA | 146 | GJ21219-PA | 1..140 | 1..140 | 414 | 47.1 | Plus |
Dvir\GJ15392-PA | 134 | GJ15392-PA | 9..133 | 4..139 | 254 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21965-PA | 152 | GK21965-PA | 1..144 | 1..144 | 666 | 81.9 | Plus |
Dwil\GK21964-PA | 125 | GK21964-PA | 1..121 | 1..121 | 350 | 47.1 | Plus |
Dwil\GK16197-PA | 136 | GK16197-PA | 7..135 | 2..139 | 229 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11984-PA | 149 | GE11984-PA | 1..149 | 1..149 | 783 | 98 | Plus |
Dyak\GE11983-PA | 146 | GE11983-PA | 1..140 | 1..140 | 417 | 47.9 | Plus |
Dyak\GE17426-PA | 132 | GE17426-PA | 10..131 | 3..139 | 183 | 32.1 | Plus |
Translation from 63 to 512
> AT24188.hyp MVEQQKKRLEGAISEMIEDMYRTHLRRMQSTMHRCAARCCDDDRGTLESV QNCIEKCAGPLMDAQDFLQHELGQFQNRLQNCVRDCNSDARSQMPSNPSD RDMSRSQHMFESCTNNCVDKYINLIPGLLKSIKQTLDRGPPKRSRNMDV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5327-PA | 149 | CG5327-PA | 1..149 | 1..149 | 800 | 100 | Plus |
CG5323-PA | 146 | CG5323-PA | 1..140 | 1..140 | 424 | 47.1 | Plus |
CG12661-PB | 131 | CG12661-PB | 8..130 | 2..139 | 260 | 32.6 | Plus |
CG12661-PA | 131 | CG12661-PA | 8..130 | 2..139 | 260 | 32.6 | Plus |