BDGP Sequence Production Resources |
Search the DGRC for AT24389
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 243 |
Well: | 89 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG11739-RA |
Protein status: | AT24389.pep: gold |
Preliminary Size: | 1286 |
Sequenced Size: | 1316 |
Gene | Date | Evidence |
---|---|---|
CG11739 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11739 | 2002-02-22 | Blastp of sequenced clone |
CG11739 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11739 | 2008-04-29 | Release 5.5 accounting |
CG11739 | 2008-08-15 | Release 5.9 accounting |
CG11739 | 2008-12-18 | 5.12 accounting |
1316 bp (1316 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089419
> AT24389.complete GTTACATATGGGATAAAAAGGCGAAAGCAAAAAGGAGCCGACAAAAGTTA TTTAATATTTTAAAGGGCAATCATGAGCCCTCTCCCACGAGTCAACATCG ACGAGCCGAAATATGATCAGAACTCCTACTTGGGCAGAGCCAAGCACTTC TTCCTGCTGACCAACCCGCTTAATGTGCTGGCCTCCGCCTCGAAGTTGGA GGAGGCCCGCCAGATTGTGATAAAGTACCGGGCTGGCAAGGATGTTCCCG AGTGCAAGACCATCGACGACGTGTGGCGCGCTAAGTACCTGTACGATTCG GCGTTCCATCCAGAGACCGGGGAGAAGCAGATAGTCATCGGGCGCATGGC TGCGCAGATGCCCATGAACACAATCATCACCGGCGGCATGATGGCCTTCT ACAAAAGCACTCCCGCCGTCGTCTTCTGGCAGTGGTTCAATCAGACATTC AACGCCATTGTTAACTACACGAACCGTTCGGGAACCTCGCCCATCAGCCA GCAGCAACTAGTTACCTCGTACTGTTTGGCCACTAGCGGAGCCCTGGTCA CGGCCCTTTCCCTGAACCACGCAGTGAAGAACATGAATCCGCTCTTGGGT CGCCTTGTCCCCCTAGTGGCAGTTGGAGCTGCCAACTGCATCAACATCCC CTGCATGCGAATGCAAGAGCTGCGCAACGGAGTGACGCTTTTCGATGAAC ACAGCAACGAAATGGGCATCTCAAAGAAGGCGGCCGTTGTTGGGATCTCA ACCGTAATCCTAAGTCGAATCGCCATGGCCATACCGGGAATGACACTGAC ACCGGTGTTGATGAATGTCCTCGAAAAGAGGGGATTCCTGGCTAAATACC CGCGATCCAACGCTCCCATCCAAACGCTCTTCTGCGGCTTCGTGCTGATT TTCGCCACGCCCCTTGGCTGCGCCTTCTTCAAGCAGCGAGCGGACATCAA AGTGGATAGCCTGGAGTCGGAGGTCCGCGACAGCATTAGGAAGAAGCGTC CGGAATTGGAAACTGTCTGGTTCAACAAGGGACTGTGAGGCCCTATGCCA TTTACGAGCTTAACGGAGACAATACTGCTCGATTGAGCAACTATTTATTT CCCTTCTTGCATTTATTGGCATTTTGCCTGTTGACTTCTGTTCGAAATAC TCCTGATATTAGCCTGACCGCATATGCTTACCGTTCACAGCAAGCGACAC GTCAGTGAATCAAATTTACAGTGTATATTATAGTGATTGTGTAAAAGTGA AAATGTATGAAACAAAAATATATCTGTTAACTGTTAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11739-RC | 1304 | CG11739-RC | 4..1289 | 1..1286 | 6430 | 100 | Plus |
CG11739-RD | 1683 | CG11739-RD | 360..1584 | 62..1286 | 6110 | 99.9 | Plus |
CG11739-RA | 1683 | CG11739-RA | 360..1584 | 62..1286 | 6110 | 99.9 | Plus |
CG11739-RD | 1683 | CG11739-RD | 19..85 | 1..67 | 335 | 100 | Plus |
CG11739-RA | 1683 | CG11739-RA | 19..85 | 1..67 | 335 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 206422..206913 | 794..1285 | 2460 | 100 | Plus |
chr3R | 27901430 | chr3R | 205168..205342 | 66..240 | 860 | 99.4 | Plus |
chr3R | 27901430 | chr3R | 205828..205989 | 504..665 | 810 | 100 | Plus |
chr3R | 27901430 | chr3R | 205393..205544 | 235..386 | 760 | 100 | Plus |
chr3R | 27901430 | chr3R | 206223..206350 | 666..793 | 640 | 100 | Plus |
chr3R | 27901430 | chr3R | 205646..205765 | 385..504 | 600 | 100 | Plus |
chr3R | 27901430 | chr3R | 204383..204449 | 1..67 | 335 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 4380703..4381195 | 794..1286 | 2465 | 100 | Plus |
3R | 32079331 | 3R | 4379449..4379623 | 66..240 | 860 | 99.4 | Plus |
3R | 32079331 | 3R | 4380109..4380270 | 504..665 | 810 | 100 | Plus |
3R | 32079331 | 3R | 4379674..4379825 | 235..386 | 760 | 100 | Plus |
3R | 32079331 | 3R | 4380504..4380631 | 666..793 | 640 | 100 | Plus |
3R | 32079331 | 3R | 4379927..4380046 | 385..504 | 600 | 100 | Plus |
3R | 32079331 | 3R | 4378664..4378730 | 1..67 | 335 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 4121534..4122026 | 794..1286 | 2465 | 100 | Plus |
3R | 31820162 | 3R | 4120280..4120454 | 66..240 | 860 | 99.4 | Plus |
3R | 31820162 | 3R | 4120940..4121101 | 504..665 | 810 | 100 | Plus |
3R | 31820162 | 3R | 4120505..4120656 | 235..386 | 760 | 100 | Plus |
3R | 31820162 | 3R | 4121335..4121462 | 666..793 | 640 | 100 | Plus |
3R | 31820162 | 3R | 4120758..4120877 | 385..504 | 600 | 100 | Plus |
3R | 31820162 | 3R | 4119495..4119561 | 1..67 | 335 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 206223..206350 | 666..793 | 100 | -> | Plus |
chr3R | 204383..204448 | 1..66 | 100 | -> | Plus |
chr3R | 205169..205337 | 67..235 | 100 | -> | Plus |
chr3R | 205394..205543 | 236..385 | 100 | -> | Plus |
chr3R | 205647..205764 | 386..503 | 100 | -> | Plus |
chr3R | 205828..205989 | 504..665 | 100 | -> | Plus |
chr3R | 206422..206913 | 794..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11739-RD | 1..966 | 73..1038 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11739-RD | 1..966 | 73..1038 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11739-RA | 1..966 | 73..1038 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11739-RD | 1..966 | 73..1038 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11739-RA | 1..966 | 73..1038 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11739-RC | 1..1285 | 1..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11739-RC | 1..1285 | 1..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11739-RC | 65..1349 | 1..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11739-RC | 1..1285 | 1..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11739-RC | 65..1349 | 1..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4380109..4380270 | 504..665 | 100 | -> | Plus |
3R | 4380504..4380631 | 666..793 | 100 | -> | Plus |
3R | 4378664..4378729 | 1..66 | 100 | -> | Plus |
3R | 4379450..4379618 | 67..235 | 100 | -> | Plus |
3R | 4379675..4379824 | 236..385 | 100 | -> | Plus |
3R | 4379928..4380045 | 386..503 | 100 | -> | Plus |
3R | 4380703..4381194 | 794..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4380109..4380270 | 504..665 | 100 | -> | Plus |
3R | 4380504..4380631 | 666..793 | 100 | -> | Plus |
3R | 4378664..4378729 | 1..66 | 100 | -> | Plus |
3R | 4379450..4379618 | 67..235 | 100 | -> | Plus |
3R | 4379675..4379824 | 236..385 | 100 | -> | Plus |
3R | 4379928..4380045 | 386..503 | 100 | -> | Plus |
3R | 4380703..4381194 | 794..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4380109..4380270 | 504..665 | 100 | -> | Plus |
3R | 4380504..4380631 | 666..793 | 100 | -> | Plus |
3R | 4378664..4378729 | 1..66 | 100 | -> | Plus |
3R | 4379450..4379618 | 67..235 | 100 | -> | Plus |
3R | 4379675..4379824 | 236..385 | 100 | -> | Plus |
3R | 4379928..4380045 | 386..503 | 100 | -> | Plus |
3R | 4380703..4381194 | 794..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 204386..204451 | 1..66 | 100 | -> | Plus |
arm_3R | 205172..205340 | 67..235 | 100 | -> | Plus |
arm_3R | 205397..205546 | 236..385 | 100 | -> | Plus |
arm_3R | 205650..205767 | 386..503 | 100 | -> | Plus |
arm_3R | 205831..205992 | 504..665 | 100 | -> | Plus |
arm_3R | 206226..206353 | 666..793 | 100 | -> | Plus |
arm_3R | 206425..206916 | 794..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4121534..4122025 | 794..1285 | 100 | Plus | |
3R | 4119495..4119560 | 1..66 | 100 | -> | Plus |
3R | 4120281..4120449 | 67..235 | 100 | -> | Plus |
3R | 4120506..4120655 | 236..385 | 100 | -> | Plus |
3R | 4120759..4120876 | 386..503 | 100 | -> | Plus |
3R | 4120940..4121101 | 504..665 | 100 | -> | Plus |
3R | 4121335..4121462 | 666..793 | 100 | -> | Plus |
Translation from 72 to 1037
> AT24389.pep MSPLPRVNIDEPKYDQNSYLGRAKHFFLLTNPLNVLASASKLEEARQIVI KYRAGKDVPECKTIDDVWRAKYLYDSAFHPETGEKQIVIGRMAAQMPMNT IITGGMMAFYKSTPAVVFWQWFNQTFNAIVNYTNRSGTSPISQQQLVTSY CLATSGALVTALSLNHAVKNMNPLLGRLVPLVAVGAANCINIPCMRMQEL RNGVTLFDEHSNEMGISKKAAVVGISTVILSRIAMAIPGMTLTPVLMNVL EKRGFLAKYPRSNAPIQTLFCGFVLIFATPLGCAFFKQRADIKVDSLESE VRDSIRKKRPELETVWFNKGL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18208-PA | 321 | GF18208-PA | 1..321 | 1..321 | 1476 | 82.9 | Plus |
Dana\GF16265-PA | 321 | GF16265-PA | 3..310 | 4..311 | 1173 | 69.8 | Plus |
Dana\GF23658-PA | 327 | GF23658-PA | 8..327 | 7..321 | 608 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12340-PA | 321 | GG12340-PA | 1..321 | 1..321 | 1691 | 97.2 | Plus |
Dere\GG16020-PA | 335 | GG16020-PA | 8..335 | 7..321 | 598 | 41.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18870-PA | 321 | GH18870-PA | 1..321 | 1..321 | 1445 | 80.1 | Plus |
Dgri\GH14609-PA | 327 | GH14609-PA | 8..327 | 7..321 | 629 | 43.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sfxn1-3-PB | 321 | CG11739-PB | 1..321 | 1..321 | 1657 | 100 | Plus |
Sfxn1-3-PD | 321 | CG11739-PD | 1..321 | 1..321 | 1657 | 100 | Plus |
Sfxn1-3-PA | 321 | CG11739-PA | 1..321 | 1..321 | 1657 | 100 | Plus |
Sfxn1-3-PC | 321 | CG11739-PC | 1..321 | 1..321 | 1657 | 100 | Plus |
Sfxn2-PA | 327 | CG6812-PA | 8..327 | 7..321 | 641 | 43 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24728-PA | 321 | GI24728-PA | 1..321 | 1..321 | 1389 | 76.9 | Plus |
Dmoj\GI13497-PA | 330 | GI13497-PA | 7..330 | 7..321 | 636 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10589-PA | 321 | GL10589-PA | 1..321 | 1..321 | 1470 | 81.6 | Plus |
Dper\GL21459-PA | 321 | GL21459-PA | 1..321 | 1..321 | 1468 | 81.6 | Plus |
Dper\GL21744-PA | 333 | GL21744-PA | 6..333 | 7..321 | 639 | 42.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26276-PC | 321 | GA26276-PC | 1..321 | 1..321 | 1468 | 81.6 | Plus |
Dpse\GA26276-PB | 321 | GA26276-PB | 1..321 | 1..321 | 1468 | 81.6 | Plus |
Dpse\GA26276-PA | 321 | GA26276-PA | 1..321 | 1..321 | 1468 | 81.6 | Plus |
Dpse\GA24416-PA | 538 | GA24416-PA | 233..538 | 21..321 | 916 | 59.7 | Plus |
Dpse\GA19877-PA | 333 | GA19877-PA | 6..333 | 7..321 | 639 | 42.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10749-PA | 321 | GM10749-PA | 1..321 | 1..321 | 1725 | 99.7 | Plus |
Dsec\GM15009-PA | 327 | GM15009-PA | 8..327 | 7..321 | 626 | 43 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19721-PA | 321 | GD19721-PA | 1..321 | 1..321 | 1725 | 99.7 | Plus |
Dsim\GD14786-PA | 327 | GD14786-PA | 8..327 | 7..321 | 617 | 42.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14554-PA | 321 | GJ14554-PA | 1..321 | 1..321 | 1456 | 80.7 | Plus |
Dvir\GJ11858-PA | 331 | GJ11858-PA | 14..331 | 14..321 | 604 | 43.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13527-PA | 321 | GK13527-PA | 1..321 | 1..321 | 1434 | 80.1 | Plus |
Dwil\GK10400-PA | 331 | GK10400-PA | 7..331 | 4..321 | 663 | 42.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25411-PA | 321 | GE25411-PA | 1..321 | 1..321 | 1672 | 96 | Plus |
Dyak\GE19584-PA | 327 | GE19584-PA | 8..327 | 7..321 | 619 | 42.7 | Plus |
Dyak\GE23187-PA | 292 | GE23187-PA | 8..292 | 7..321 | 508 | 38 | Plus |
Translation from 72 to 1037
> AT24389.hyp MSPLPRVNIDEPKYDQNSYLGRAKHFFLLTNPLNVLASASKLEEARQIVI KYRAGKDVPECKTIDDVWRAKYLYDSAFHPETGEKQIVIGRMAAQMPMNT IITGGMMAFYKSTPAVVFWQWFNQTFNAIVNYTNRSGTSPISQQQLVTSY CLATSGALVTALSLNHAVKNMNPLLGRLVPLVAVGAANCINIPCMRMQEL RNGVTLFDEHSNEMGISKKAAVVGISTVILSRIAMAIPGMTLTPVLMNVL EKRGFLAKYPRSNAPIQTLFCGFVLIFATPLGCAFFKQRADIKVDSLESE VRDSIRKKRPELETVWFNKGL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11739-PB | 321 | CG11739-PB | 1..321 | 1..321 | 1657 | 100 | Plus |
CG11739-PD | 321 | CG11739-PD | 1..321 | 1..321 | 1657 | 100 | Plus |
CG11739-PA | 321 | CG11739-PA | 1..321 | 1..321 | 1657 | 100 | Plus |
CG11739-PC | 321 | CG11739-PC | 1..321 | 1..321 | 1657 | 100 | Plus |
CG6812-PA | 327 | CG6812-PA | 8..327 | 7..321 | 641 | 43 | Plus |