BDGP Sequence Production Resources |
Search the DGRC for AT24563
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 245 |
Well: | 63 |
Vector: | pOTB7 |
Associated Gene/Transcript | elfless-RA |
Protein status: | AT24563.pep: validated full length |
Preliminary Size: | 564 |
Sequenced Size: | 1194 |
Gene | Date | Evidence |
---|---|---|
CG15150 | 2002-01-01 | Sim4 clustering to Release 2 |
CG15150 | 2002-04-26 | Blastp of sequenced clone |
CG15150 | 2003-01-01 | Sim4 clustering to Release 3 |
elfless | 2008-04-29 | Release 5.5 accounting |
elfless | 2008-08-15 | Release 5.9 accounting |
elfless | 2008-12-18 | 5.12 accounting |
1194 bp (1194 high quality bases) assembled on 2002-04-26
GenBank Submission: AY113298
> AT24563.complete CTCAGTTACCTGGTGGGACTTCAAATGGAAAACTTCAGGACCTCGAATAA TTCTGGAGTATCACAGCGAATCCATAACACCGGGCCCACTCCCGTACTCG CGCCCTCCGGATTAAGATCCCGCTTACTCAGCGGTTCCTCTGAGCGGAAT CCAAATGAGTATTACGGAGACTCGGACTCCTCAAGCAGCAGCAGATCTAT CGACAGAACCCCATTCCTGTTGGAGTATTCCAGCGACTCAGAGTCGTCTA GTTCCAGTGATAGTGAAAGCTCATCGACCAGCATTAGCTTCGATAGCAGT ATGAGCTCCACCGAATCATCAACACCAATGGGACATACAGAATCCTCAGA TTCAAACGAGGATTCTCCTCCCAACAAACGGATCAAATCAGATGACGAGG AGTCCAAGAAATCTGTCTTGCCCTACAACTGCCCTGTGTGCCTGGAAGAT GTCCGCGAGAAGCTACCAGTGTCCACCAATTGTGGCCACGTTTTCTGCAA AGCGTGCATTAAGAGAGCTGTCGACACTGGCAGGGTATGCCCATTGTGCG GAGTGGATGAGCCCGAATTCCATCGTATTTTCTTGTAAGACGTGATATGG CAGAAAGCATACTAAACTAAAAATACCACGGTTTTAAATACCACAAATAG ACTTGTGGCATATACTTTCGAAAGACCGTAACACAATATTCACACCTAAA GAAACTGTTGCTCCATTATAACAACGCAAACAAAATCTTATCCCAGGCAA CATACTCAAGAAACACAATGCAATCGAAAACTTTCAGCTGAGAAACTAAA ACTCAAATACAAGACAGACAACTTTGGCCATAAAACATGGCGCAAGGACA CACTCGCATACTTGCAGGAAACCCCGGAAAAATGGAAGGCAAGCAATGAA AATTCCGACCTACCGCAATAAATTCCGCGGAAAAACAAAGCAAGTGATGC CAAAATAAGAGTGAAATGGCCAGCTCACACACACACATGAATGTAAATGA AGTGGAATCACCACCTCAGAAAAAGTCAGGGACACCTCAGACACGGCCCT GTAAATCGCGCTTATCCAAAACACAACATGGCATCAGGAGGCATTGGAGA TTCAGTTTCATTTTCATTCAAAGATTGAATAATAGAAGGGGGTGTTCCAT CCCTACCCCAACAACCTTTGACCTGAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 18008555..18009511 | 1175..219 | 4755 | 99.8 | Minus |
chr2L | 23010047 | chr2L | 18009722..18009852 | 142..12 | 640 | 99.2 | Minus |
chr2L | 23010047 | chr2L | 18009579..18009656 | 219..142 | 390 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 18009909..18010866 | 1176..219 | 4775 | 99.9 | Minus |
2L | 23513712 | 2L | 18011077..18011207 | 142..12 | 655 | 100 | Minus |
2L | 23513712 | 2L | 18010934..18011011 | 219..142 | 390 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 18009909..18010866 | 1176..219 | 4775 | 99.8 | Minus |
2L | 23513712 | 2L | 18011077..18011207 | 142..12 | 655 | 100 | Minus |
2L | 23513712 | 2L | 18010934..18011011 | 219..142 | 390 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 18008555..18009510 | 220..1175 | 99 | <- | Minus |
chr2L | 18009579..18009656 | 142..219 | 100 | <- | Minus |
chr2L | 18009723..18009854 | 7..141 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
elfless-RA | 1..564 | 25..588 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
elfless-RC | 103..690 | 1..588 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
elfless-RB | 103..690 | 1..588 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
elfless-RA | 1..564 | 25..588 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
elfless-RB | 103..690 | 1..588 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
elfless-RA | 1..1166 | 11..1175 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
elfless-RC | 202..1376 | 1..1175 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
elfless-RB | 202..1376 | 1..1175 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
elfless-RA | 1..1166 | 11..1175 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
elfless-RB | 202..1376 | 1..1175 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18011078..18011209 | 7..141 | 97 | Minus | |
2L | 18009910..18010865 | 220..1175 | 99 | <- | Minus |
2L | 18010934..18011011 | 142..219 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18011078..18011209 | 7..141 | 97 | Minus | |
2L | 18009910..18010865 | 220..1175 | 99 | <- | Minus |
2L | 18010934..18011011 | 142..219 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18011078..18011209 | 7..141 | 97 | Minus | |
2L | 18009910..18010865 | 220..1175 | 99 | <- | Minus |
2L | 18010934..18011011 | 142..219 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 18009910..18010865 | 220..1175 | 99 | <- | Minus |
arm_2L | 18010934..18011011 | 142..219 | 100 | <- | Minus |
arm_2L | 18011078..18011209 | 7..141 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18009910..18010865 | 220..1175 | 99 | <- | Minus |
2L | 18010934..18011011 | 142..219 | 100 | <- | Minus |
2L | 18011078..18011209 | 7..141 | 97 | Minus |
Translation from 24 to 587
> AT24563.pep MENFRTSNNSGVSQRIHNTGPTPVLAPSGLRSRLLSGSSERNPNEYYGDS DSSSSSRSIDRTPFLLEYSSDSESSSSSDSESSSTSISFDSSMSSTESST PMGHTESSDSNEDSPPNKRIKSDDEESKKSVLPYNCPVCLEDVREKLPVS TNCGHVFCKACIKRAVDTGRVCPLCGVDEPEFHRIFL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16357-PA | 202 | GF16357-PA | 122..202 | 105..187 | 185 | 42.4 | Plus |
Dana\GF14677-PA | 326 | GF14677-PA | 246..326 | 107..187 | 185 | 43.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21725-PA | 192 | GG21725-PA | 105..192 | 93..187 | 295 | 60 | Plus |
Dere\GG13065-PA | 320 | GG13065-PA | 242..320 | 109..187 | 162 | 42 | Plus |
Dere\GG22477-PA | 94 | GG22477-PA | 38..80 | 133..175 | 134 | 51.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22295-PA | 202 | GH22295-PA | 146..202 | 133..187 | 157 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
elfless-PC | 229 | CG15150-PC | 43..229 | 1..187 | 974 | 100 | Plus |
elfless-PB | 229 | CG15150-PB | 43..229 | 1..187 | 974 | 100 | Plus |
dgrn-PD | 205 | CG10981-PD | 127..205 | 109..187 | 182 | 44.4 | Plus |
dgrn-PB | 312 | CG10981-PB | 234..312 | 109..187 | 182 | 44.4 | Plus |
dgrn-PA | 319 | CG10981-PA | 241..319 | 109..187 | 182 | 44.4 | Plus |
CG43058-PA | 100 | CG43058-PA | 30..100 | 116..187 | 168 | 43.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14783-PA | 374 | GI14783-PA | 319..360 | 134..175 | 161 | 59.5 | Plus |
Dmoj\GI21991-PA | 294 | GI21991-PA | 239..294 | 134..187 | 159 | 51.8 | Plus |
Dmoj\GI13656-PA | 254 | GI13656-PA | 198..254 | 133..187 | 154 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24328-PA | 317 | GL24328-PA | 245..317 | 114..187 | 150 | 42.1 | Plus |
Dper\GL24317-PA | 151 | GL24317-PA | 82..137 | 118..175 | 142 | 44.8 | Plus |
Dper\GL20345-PA | 117 | GL20345-PA | 62..107 | 134..179 | 136 | 45.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25529-PA | 128 | GA25529-PA | 9..128 | 70..187 | 172 | 35.5 | Plus |
Dpse\GA26569-PA | 209 | GA26569-PA | 140..195 | 118..175 | 158 | 46.6 | Plus |
Dpse\GA28705-PA | 209 | GA28705-PA | 140..195 | 118..175 | 151 | 44.8 | Plus |
Dpse\GA28704-PA | 209 | GA28704-PA | 140..195 | 118..175 | 151 | 44.8 | Plus |
Dpse\GA28682-PA | 138 | GA28682-PA | 69..124 | 118..175 | 149 | 44.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10845-PA | 329 | GM10845-PA | 256..329 | 114..187 | 173 | 47.4 | Plus |
Dsec\GM20261-PA | 167 | GM20261-PA | 32..87 | 118..175 | 154 | 43.1 | Plus |
Dsec\GM17105-PA | 97 | GM17105-PA | 9..67 | 8..71 | 152 | 56.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19827-PA | 329 | GD19827-PA | 256..329 | 114..187 | 172 | 47.4 | Plus |
Dsim\GD17803-PA | 157 | GD17803-PA | 10..61 | 9..60 | 170 | 69.2 | Plus |
Dsim\GD25747-PA | 101 | GD25747-PA | 45..101 | 133..187 | 156 | 45.6 | Plus |
Dsim\GD22545-PA | 91 | GD22545-PA | 21..91 | 110..187 | 137 | 35.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13990-PA | 303 | GJ13990-PA | 227..303 | 113..187 | 159 | 40.3 | Plus |
Dvir\GJ18825-PA | 288 | GJ18825-PA | 233..284 | 134..186 | 155 | 54.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14441-PA | 207 | GK14441-PA | 152..207 | 134..187 | 158 | 46.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13114-PA | 239 | GE13114-PA | 45..239 | 1..187 | 350 | 51.9 | Plus |
Dyak\GE10170-PA | 344 | GE10170-PA | 268..344 | 112..187 | 172 | 42.3 | Plus |
Dyak\GE13346-PA | 230 | GE13346-PA | 174..230 | 133..187 | 146 | 45.6 | Plus |
Translation from 24 to 587
> AT24563.hyp MENFRTSNNSGVSQRIHNTGPTPVLAPSGLRSRLLSGSSERNPNEYYGDS DSSSSSRSIDRTPFLLEYSSDSESSSSSDSESSSTSISFDSSMSSTESST PMGHTESSDSNEDSPPNKRIKSDDEESKKSVLPYNCPVCLEDVREKLPVS TNCGHVFCKACIKRAVDTGRVCPLCGVDEPEFHRIFL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
elfless-PC | 229 | CG15150-PC | 43..229 | 1..187 | 974 | 100 | Plus |
elfless-PB | 229 | CG15150-PB | 43..229 | 1..187 | 974 | 100 | Plus |
dgrn-PD | 205 | CG10981-PD | 127..205 | 109..187 | 182 | 44.4 | Plus |
dgrn-PB | 312 | CG10981-PB | 234..312 | 109..187 | 182 | 44.4 | Plus |
dgrn-PA | 319 | CG10981-PA | 241..319 | 109..187 | 182 | 44.4 | Plus |