BDGP Sequence Production Resources |
Search the DGRC for AT24654
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 246 |
Well: | 54 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG33189-RA |
Protein status: | AT24654.pep: gold |
Sequenced Size: | 705 |
Gene | Date | Evidence |
---|---|---|
CG33189 | 2003-01-01 | Sim4 clustering to Release 3 |
CG33189 | 2004-09-29 | Blastp of sequenced clone |
CG33189 | 2008-04-29 | Release 5.5 accounting |
CG33189 | 2008-08-15 | Release 5.9 accounting |
CG33189 | 2008-12-18 | 5.12 accounting |
705 bp (705 high quality bases) assembled on 2004-09-29
GenBank Submission: BT016142
> AT24654.complete ATCAGATTAATCCAAATTGTTTAAACGTTGAGCATTATGATTGGCGAGTT TGAGGACTTAGACATCTTTTATGACTGCCGCAGTGACGACGAGGAGACTC CAGATCTGGAAGTGGGCGGTGGTGATGAAGTGATCTGCAAGCAAGCGCCT CGATTTGACGATCCTGTCCAGATTCGGGCCGTTTTGGAGCGGGCAGCCAC TGCCACCCAGCGGTTGCTAAGGTGCTACGGAGGCACTGATTCCGTGCCAA CTCGTCCTTTGATGACACTTTTCTATCCGGCCACCCTGGAGGTCAGTGCC CGTCTACATACGGACGACAAGTGTCCTTGCCCCAAGGACAGGCAGTGCAA GTTAATCGGCGACCCAGTGACCCTGAGGCTGCCAATCGAACTGAATCCGG AAAGCGGCCAGGTCAAAGTCAACATCTTCCAGCCCAAGTCAATTGGCACA TTTTGTGGATGCAATGCACCTGGAAATCAGAACAAGTCGAAGAGCAGAAG ATCGAGTGTAAAGTGGTCCAACAAGGATGAAGTGTGTCCCGATTGCCAGG AACCTAATCAAAACACGTAAATTTTAAACTTATCAAGAGCCACGTCTTGC TCACTTAGTTGTTTTTTCTCAAAATTCATTGGTGACTAAATTGGATTATG TTTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33189-RA | 677 | CG33189-RA | 22..677 | 1..656 | 3280 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 4606086..4606741 | 656..1 | 3280 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 8780110..8780768 | 659..1 | 3295 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 8520941..8521599 | 659..1 | 3295 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
McClintock | 6450 | McClintock McCLINTOCK 6450bp | 5652..5687 | 637..602 | 108 | 77.8 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 4606086..4606741 | 1..656 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33189-RA | 1..534 | 37..570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33189-RA | 1..534 | 37..570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33189-RA | 1..534 | 37..570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33189-RA | 1..534 | 37..570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33189-RA | 1..534 | 37..570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33189-RA | 22..677 | 1..656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33189-RA | 22..677 | 1..656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33189-RA | 22..677 | 1..656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33189-RA | 29..684 | 1..656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33189-RA | 22..677 | 1..656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8780113..8780768 | 1..656 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8780113..8780768 | 1..656 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8780113..8780768 | 1..656 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 4605835..4606490 | 1..656 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8520944..8521599 | 1..656 | 100 | Minus |
Translation from 36 to 569
> AT24654.hyp MIGEFEDLDIFYDCRSDDEETPDLEVGGGDEVICKQAPRFDDPVQIRAVL ERAATATQRLLRCYGGTDSVPTRPLMTLFYPATLEVSARLHTDDKCPCPK DRQCKLIGDPVTLRLPIELNPESGQVKVNIFQPKSIGTFCGCNAPGNQNK SKSRRSSVKWSNKDEVCPDCQEPNQNT*
Translation from 36 to 569
> AT24654.pep MIGEFEDLDIFYDCRSDDEETPDLEVGGGDEVICKQAPRFDDPVQIRAVL ERAATATQRLLRCYGGTDSVPTRPLMTLFYPATLEVSARLHTDDKCPCPK DRQCKLIGDPVTLRLPIELNPESGQVKVNIFQPKSIGTFCGCNAPGNQNK SKSRRSSVKWSNKDEVCPDCQEPNQNT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16832-PA | 176 | GF16832-PA | 1..171 | 1..170 | 635 | 73.7 | Plus |
Dana\GF16833-PA | 484 | GF16833-PA | 57..168 | 7..124 | 157 | 37.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17420-PA | 177 | GG17420-PA | 1..177 | 1..177 | 866 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19336-PA | 191 | GH19336-PA | 2..141 | 4..134 | 253 | 45.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33189-PA | 177 | CG33189-PA | 1..177 | 1..177 | 961 | 100 | Plus |
CG33191-PA | 476 | CG33191-PA | 56..157 | 9..126 | 162 | 41 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\Tes134-PA | 203 | GI23946-PA | 3..150 | 9..144 | 238 | 41.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12127-PA | 191 | GL12127-PA | 20..152 | 9..142 | 337 | 56.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17353-PA | 191 | GA17353-PA | 20..152 | 9..142 | 342 | 56.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26310-PA | 177 | GM26310-PA | 1..177 | 1..177 | 911 | 96.6 | Plus |
Dsec\GM26311-PA | 231 | GM26311-PA | 56..157 | 9..126 | 166 | 42 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20842-PA | 164 | GD20842-PA | 1..98 | 1..106 | 430 | 79.2 | Plus |
Dsim\GD20843-PA | 476 | GD20843-PA | 56..157 | 9..126 | 165 | 42 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23735-PA | 190 | GJ23735-PA | 3..144 | 9..135 | 274 | 43.7 | Plus |
Dvir\GJ23736-PA | 520 | GJ23736-PA | 121..209 | 37..133 | 175 | 42.3 | Plus |