Clone AT24894 Report

Search the DGRC for AT24894

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:248
Well:94
Vector:pOTB7
Associated Gene/TranscriptCG31693-RB
Protein status:AT24894.pep: gold
Sequenced Size:2077

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31693 2008-04-29 Release 5.5 accounting
CG31693 2008-04-29 Picked prior to 5.5
CG31693 2008-08-15 Release 5.9 accounting
CG31693 2008-12-18 5.12 accounting

Clone Sequence Records

AT24894.complete Sequence

2077 bp assembled on 2007-11-15

GenBank Submission: BT031186

> AT24894.complete
AAATGAAAATTTTAAGTAATCTTTTGGTTATAAACTCGCAGCGCTTGGGC
GGCAGCCGTTTCCAGGCGTGGCCTAACGTACGCCAAACCAGATCAGATAT
CCGACGGCAAAATGACGGACAACAGTCTTCTGGCCGCCATGTGAAAATTA
TTCATATTGTCAAGATCCGAGCAATCGACACGCAGCACTATGATCACCGT
GATGCCCAATAAAACTGCCATGACGAAAGTCGAGCCGCCCAACAACGCTC
TCAAAGTCACACTACATGGACCAGTACAGAGTAATGGAGCTGACGGCGTG
GACTTGCGCTTGGAATGGCGGAGCTCAGATTTAAATGTGACTTACCGCCG
GACCGAGGTGTGGAACATTGGCATAAGCAATGATGATACGGCATACGCGA
AAGTGTCGAGAAACTTCATGGTCAAAAGAACGGGAGGGGCAGATAGTCAA
GCAGTTATCTCGCTGGAGAGTAAACGGAATTCTCCGATATCCCTGCACGT
TGTTATAGACACAAATCCGATGGTCACTGATATGTGCCTCGTTTGTGCAG
GGCTCTTGATCCTTGGACTCTATATGCTGATCATTTTTGACGTAATCGAT
CACACCTTTGCTGCACTCATTATAGCTACCACAGCTGTCGCGATTCTCGC
TATCCTGGAGCACCGGCCCAGCATGCGTGCGATAGTATCATTTGTTAACT
TCGAGCCCCTAATGTTGCTCTTCGGGCTAATGACCATTGTGGATATTATG
GCGACAACGGGTGTCTTCGATTTCCTGGTCGTTTGGACCTACAGGATTTC
CAGGGGTCGACCGTGGCCGCTTATTTTTTTTCTGAGCATGCTGACCGCTT
TTTTGTCCGCTTTCCTGAACAGCGATATCATGGCTTTGTCACTAACCCCA
ATAACTATCCGTCTGTGCGAGGAGATGTCCCTGCGAACCAGCTACGTTCT
GGTCGTAATGGCTATATTCGCAGATATGGGCGGTGCATTAACGCCTTTGG
GAAATCCACCCAATGCGATCGTAACGACAAGTCCGGTTGCGGTTGCGGAA
GGAGTTGACTTTGCCCACTTTATAATACACATGATGCCAGGAGTGCTGGC
CGCGATGTTCGTGGTCTTTGGTATAATTTACGTGACCCACAGAAAAAGTA
TATTTGTCCTGGATCAAAATCAGTTGGATCTTATGGAGGAGAGAGCAAGA
GGAAAAAAACCGCCCAGCCAGGAAACCCTAGATCGCATAGCTCTCCTCAA
GGGTAGCTTGCCAGGCAAGTACTGGTTGAGGCCAGTAGAAGGCTATCCAG
AAACATTGGCTGAGTTGGAGGCGAGCAGTCGGATTCTCGATAAGCCGCTT
CTGGTTAGGTGCTGCATAGCCCTCATCTTCGCCTTCCTCTGCATGCTCCT
CCACTCGATACCCAAAGTAGCAGATGGGGCTTCCTTGGGCTGGGTAACTT
TGCTAGCCGCCTTCTTGCTCATTATCCTGGACGACAAAAACGACCTGAAC
GCCACACTCGGCATAATCCAGTGGACAATCCTCCTATTCATAGCAGCCCT
TTTTGTTTTGTCTGAGGCCGTGGATCAGTTGGGATTTTTTGAATGGCTCG
GGGACAGAACGGTTGGATTTCTTAGGAGTTTGGAACCACAGAACCAGATT
GCGGTAACCACCATGGTAATTCTATGGACGACCGCCCTACTTACAATCTT
TATCGACAACGCCGCTGTTACAATATTTATGCTTAAGTTCAGCATCGAGA
TGGCCAGCAACGATGACATCCCCCTGCCACCGATGTTTTGGGCGTTGACT
TTTGGAGCCTGTTTTGGGGGAAATGGGTCTTTATTTGGGGCCGTTTCCAA
TGAGATTATTGCGCTGATCGCCCTACAGCATGGCTATAAGATATCTTTCT
GGCACTTTTTCGCCATCGGATTTCCACTAATGTTGGTGACCATGGTAATT
GGTTCGGGATACCTTTTAATCGCACACTCAGTTCTAAGTTGGAACTTACA
TTTGGTTCGTTAGAGAAATATATGAAAATAATAAAATCGAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAA

AT24894.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:32:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG31693-RB 2153 CG31693-RB 42..2085 1..2044 10175 99.8 Plus
CG31693-RA 2104 CG31693-RA 223..2100 167..2044 9345 99.8 Plus
CG31693-RA 2104 CG31693-RA 1..166 1..166 830 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:44:56
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 22014024..22015896 167..2039 9320 99.8 Plus
chr2L 23010047 chr2L 22013802..22013967 1..166 830 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:58:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:44:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22015453..22017330 167..2044 9345 99.8 Plus
2L 23513712 2L 22015231..22015396 1..166 830 100 Plus
3R 32079331 3R 22884833..22884884 2026..2077 215 94.2 Plus
3L 28110227 3L 13580056..13580107 2026..2077 215 94.2 Plus
2R 25286936 2R 2136071..2136122 2026..2077 215 94.2 Plus
2R 25286936 2R 518282..518333 2026..2077 200 92.3 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:29:02
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22015453..22017330 167..2044 9345 99.8 Plus
2L 23513712 2L 22015231..22015396 1..166 830 100 Plus
Blast to na_te.dros performed on 2019-03-16 02:44:54 has no hits.

AT24894.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:45:31 Download gff for AT24894.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 22013802..22013967 1..166 100 -> Plus
chr2L 22014024..22015896 167..2039 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:20:49 Download gff for AT24894.complete
Subject Subject Range Query Range Percent Splice Strand
CG31693-RA 1..164 3..166 100 -> Plus
CG31693-RA 221..2067 167..2013 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:01:31 Download gff for AT24894.complete
Subject Subject Range Query Range Percent Splice Strand
CG31693-RA 1..164 3..166 100 -> Plus
CG31693-RA 221..2067 167..2013 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:49:21 Download gff for AT24894.complete
Subject Subject Range Query Range Percent Splice Strand
CG31693-RA 1..164 3..166 100 -> Plus
CG31693-RA 221..2067 167..2013 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:46:56 Download gff for AT24894.complete
Subject Subject Range Query Range Percent Splice Strand
CG31693-RA 1..164 3..166 100 -> Plus
CG31693-RA 221..2067 167..2013 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:19:48 Download gff for AT24894.complete
Subject Subject Range Query Range Percent Splice Strand
CG31693-RA 1..164 3..166 100 -> Plus
CG31693-RA 221..2067 167..2013 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:45:17 Download gff for AT24894.complete
Subject Subject Range Query Range Percent Splice Strand
CG31693-RB 1..2039 1..2039 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:01:31 Download gff for AT24894.complete
Subject Subject Range Query Range Percent Splice Strand
CG31693-RB 1..2039 1..2039 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:49:21 Download gff for AT24894.complete
Subject Subject Range Query Range Percent Splice Strand
CG31693-RB 42..2080 1..2039 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:46:57 Download gff for AT24894.complete
Subject Subject Range Query Range Percent Splice Strand
CG31693-RB 1..2039 1..2039 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:19:48 Download gff for AT24894.complete
Subject Subject Range Query Range Percent Splice Strand
CG31693-RB 42..2080 1..2039 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:45:31 Download gff for AT24894.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22015231..22015396 1..166 100 -> Plus
2L 22015453..22017325 167..2039 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:45:31 Download gff for AT24894.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22015231..22015396 1..166 100 -> Plus
2L 22015453..22017325 167..2039 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:45:31 Download gff for AT24894.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22015231..22015396 1..166 100 -> Plus
2L 22015453..22017325 167..2039 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:49:21 Download gff for AT24894.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22015231..22015396 1..166 100 -> Plus
arm_2L 22015453..22017325 167..2039 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:53:26 Download gff for AT24894.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22015453..22017325 167..2039 99   Plus
2L 22015231..22015396 1..166 100 -> Plus

AT24894.pep Sequence

Translation from 189 to 2012

> AT24894.pep
MITVMPNKTAMTKVEPPNNALKVTLHGPVQSNGADGVDLRLEWRSSDLNV
TYRRTEVWNIGISNDDTAYAKVSRNFMVKRTGGADSQAVISLESKRNSPI
SLHVVIDTNPMVTDMCLVCAGLLILGLYMLIIFDVIDHTFAALIIATTAV
AILAILEHRPSMRAIVSFVNFEPLMLLFGLMTIVDIMATTGVFDFLVVWT
YRISRGRPWPLIFFLSMLTAFLSAFLNSDIMALSLTPITIRLCEEMSLRT
SYVLVVMAIFADMGGALTPLGNPPNAIVTTSPVAVAEGVDFAHFIIHMMP
GVLAAMFVVFGIIYVTHRKSIFVLDQNQLDLMEERARGKKPPSQETLDRI
ALLKGSLPGKYWLRPVEGYPETLAELEASSRILDKPLLVRCCIALIFAFL
CMLLHSIPKVADGASLGWVTLLAAFLLIILDDKNDLNATLGIIQWTILLF
IAALFVLSEAVDQLGFFEWLGDRTVGFLRSLEPQNQIAVTTMVILWTTAL
LTIFIDNAAVTIFMLKFSIEMASNDDIPLPPMFWALTFGACFGGNGSLFG
AVSNEIIALIALQHGYKISFWHFFAIGFPLMLVTMVIGSGYLLIAHSVLS
WNLHLVR*

AT24894.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:48:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23750-PA 708 GF23750-PA 91..701 1..602 1273 43.2 Plus
Dana\GF21513-PA 685 GF21513-PA 83..685 2..602 1131 39.3 Plus
Dana\GF21545-PA 847 GF21545-PA 271..847 55..602 1018 37.4 Plus
Dana\GF21544-PA 852 GF21544-PA 332..852 102..602 761 36.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:48:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21352-PA 637 GG21352-PA 28..637 1..602 2744 87.2 Plus
Dere\GG15613-PA 665 GG15613-PA 54..663 1..602 1283 45.5 Plus
Dere\GG14859-PA 681 GG14859-PA 47..681 1..602 1100 38.5 Plus
Dere\GG24342-PA 846 GG24342-PA 270..846 55..602 1032 37.4 Plus
Dere\GG24341-PA 846 GG24341-PA 326..846 102..602 738 35.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:48:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13602-PA 711 GH13602-PA 156..705 44..602 1029 39.1 Plus
Dgri\GH10104-PA 855 GH10104-PA 325..855 91..602 1024 39.1 Plus
Dgri\GH13310-PA 1049 GH13310-PA 406..1049 4..602 966 34.6 Plus
Dgri\GH10103-PA 881 GH10103-PA 324..881 70..602 734 33.2 Plus
Dgri\GH12246-PA 590 GH12246-PA 231..576 56..385 374 29.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:27:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG31693-PB 607 CG31693-PB 1..607 1..607 3094 100 Plus
CG31693-PA 688 CG31693-PA 82..688 1..607 3094 100 Plus
CG11262-PA 702 CG11262-PA 90..700 1..602 1412 44.1 Plus
CG13801-PA 690 CG13801-PA 56..690 1..602 1131 37.5 Plus
hoe1-PH 658 CG12787-PH 82..658 55..602 1038 37.4 Plus
hoe1-PA 803 CG12787-PA 227..803 55..602 1038 37.4 Plus
hoe1-PI 812 CG12787-PI 236..812 55..602 1038 37.4 Plus
hoe1-PE 812 CG12787-PE 236..812 55..602 1038 37.4 Plus
hoe1-PD 812 CG12787-PD 236..812 55..602 1038 37.4 Plus
hoe1-PF 812 CG12787-PF 236..812 55..602 1038 37.4 Plus
hoe1-PB 812 CG12787-PB 236..812 55..602 1038 37.4 Plus
hoe1-PJ 846 CG12787-PJ 270..846 55..602 1038 37.4 Plus
hoe1-PC 846 CG12787-PC 270..846 55..602 1038 37.4 Plus
hoe2-PA 846 CG15624-PA 324..846 100..602 800 35.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:48:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18174-PA 703 GI18174-PA 86..703 18..602 1071 36.7 Plus
Dmoj\GI14413-PA 805 GI14413-PA 243..805 65..602 1024 37.9 Plus
Dmoj\GI14395-PA 852 GI14395-PA 366..852 134..602 747 36.2 Plus
Dmoj\GI18175-PA 692 GI18175-PA 131..688 62..602 691 29.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:48:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15458-PA 700 GL15458-PA 69..698 1..602 1281 43.6 Plus
Dper\GL19493-PA 860 GL19493-PA 298..860 65..602 1034 38.1 Plus
Dper\GL19492-PA 849 GL19492-PA 276..849 56..602 773 34.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:48:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA29039-PA 681 GA29039-PA 69..680 1..584 1224 43.3 Plus
Dpse\GA11811-PA 860 GA11811-PA 298..860 65..602 1028 37.9 Plus
Dpse\GA13854-PA 849 GA13854-PA 276..849 56..602 772 34.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:48:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16152-PA 573 GM16152-PA 1..573 1..602 2566 85.3 Plus
Dsec\GM25385-PA 702 GM25385-PA 90..700 1..602 1255 45 Plus
Dsec\GM14485-PA 690 GM14485-PA 56..690 1..602 1108 38.1 Plus
Dsec\GM18063-PA 847 GM18063-PA 271..847 55..602 1034 37.5 Plus
Dsec\GM18062-PA 846 GM18062-PA 300..846 86..602 734 33.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:48:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24340-PA 602 GD24340-PA 1..601 1..601 3074 97.5 Plus
Dsim\GD14418-PA 702 GD14418-PA 90..700 1..602 1256 45 Plus
Dsim\GD22681-PA 812 GD22681-PA 236..812 55..602 1033 37.4 Plus
Dsim\GD11986-PA 824 GD11986-PA 278..824 86..602 745 33.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:48:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14623-PA 1004 GJ14623-PA 370..1004 15..602 1092 37.1 Plus
Dvir\GJ14626-PA 712 GJ14626-PA 81..706 13..602 1073 38.3 Plus
Dvir\GJ16262-PA 850 GJ16262-PA 270..850 51..602 1030 37.3 Plus
Dvir\GJ16261-PA 849 GJ16261-PA 278..849 58..602 768 34.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:48:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19368-PA 660 GK19368-PA 31..660 2..602 1169 39.6 Plus
Dwil\GK24590-PA 824 GK24590-PA 262..824 65..602 1026 37.8 Plus
Dwil\GK24760-PA 502 GK24760-PA 3..502 104..602 1025 43 Plus
Dwil\GK24588-PA 865 GK24588-PA 235..865 15..602 761 32.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:48:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21939-PA 659 GE21939-PA 54..657 1..602 1286 46.5 Plus
Dyak\GE12933-PA 454 GE12933-PA 172..428 329..585 1164 89.1 Plus
Dyak\GE20316-PA 681 GE20316-PA 47..681 1..602 1033 38.9 Plus
Dyak\GE18721-PA 846 GE18721-PA 270..846 55..602 1030 37.4 Plus
Dyak\GE18720-PA 844 GE18720-PA 298..844 86..602 745 34.3 Plus
Dyak\GE12933-PA 454 GE12933-PA 86..428 1..306 315 31.2 Plus

AT24894.hyp Sequence

Translation from 189 to 2012

> AT24894.hyp
MITVMPNKTAMTKVEPPNNALKVTLHGPVQSNGADGVDLRLEWRSSDLNV
TYRRTEVWNIGISNDDTAYAKVSRNFMVKRTGGADSQAVISLESKRNSPI
SLHVVIDTNPMVTDMCLVCAGLLILGLYMLIIFDVIDHTFAALIIATTAV
AILAILEHRPSMRAIVSFVNFEPLMLLFGLMTIVDIMATTGVFDFLVVWT
YRISRGRPWPLIFFLSMLTAFLSAFLNSDIMALSLTPITIRLCEEMSLRT
SYVLVVMAIFADMGGALTPLGNPPNAIVTTSPVAVAEGVDFAHFIIHMMP
GVLAAMFVVFGIIYVTHRKSIFVLDQNQLDLMEERARGKKPPSQETLDRI
ALLKGSLPGKYWLRPVEGYPETLAELEASSRILDKPLLVRCCIALIFAFL
CMLLHSIPKVADGASLGWVTLLAAFLLIILDDKNDLNATLGIIQWTILLF
IAALFVLSEAVDQLGFFEWLGDRTVGFLRSLEPQNQIAVTTMVILWTTAL
LTIFIDNAAVTIFMLKFSIEMASNDDIPLPPMFWALTFGACFGGNGSLFG
AVSNEIIALIALQHGYKISFWHFFAIGFPLMLVTMVIGSGYLLIAHSVLS
WNLHLVR*

AT24894.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:14:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG31693-PB 607 CG31693-PB 1..607 1..607 3094 100 Plus
CG31693-PA 688 CG31693-PA 82..688 1..607 3094 100 Plus
CG11262-PA 702 CG11262-PA 90..700 1..602 1412 44.1 Plus
CG13801-PA 690 CG13801-PA 56..690 1..602 1131 37.5 Plus
hoe1-PH 658 CG12787-PH 82..658 55..602 1038 37.4 Plus