Clone AT25102 Report

Search the DGRC for AT25102

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:251
Well:2
Vector:pOTB7
Associated Gene/TranscriptTektin-C-RA
Protein status:AT25102.pep: gold
Preliminary Size:1413
Sequenced Size:1539

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10541 2002-01-01 Sim4 clustering to Release 2
CG10541 2002-01-18 Blastp of sequenced clone
CG10541 2003-01-01 Sim4 clustering to Release 3
Tektin-C 2008-04-29 Release 5.5 accounting
Tektin-C 2008-08-15 Release 5.9 accounting
Tektin-C 2008-12-18 5.12 accounting

Clone Sequence Records

AT25102.complete Sequence

1539 bp (1539 high quality bases) assembled on 2002-01-18

GenBank Submission: AY089428

> AT25102.complete
GTTCCACTTTTTACCCAGCGCTCCTTGCATACATTTCTTATATACATACT
TCTTATGCAATCTTAATCGCACCCAATCCCAGCGAGAAACATGTTGCCCA
ACCTGAAGTCGCGCCGCATCAGCGGCCTGCAGCTGGCCGGGAAGCACCTG
GGTCCGGTGGCCAAGTGCCCGCCCAGATATTCCGAGGAGGACTGGGACTA
TAACAACAAGATCAAGTTTCGAATCACCTGCGACCAGGAGAAGCTGGCGG
AGCGGATCGTGGAGGAGTCGCGTCGCGTGGTGGACGAAACGAAGGACACC
ACCAAGAACTGGCAACGGGAGGTGGAGCACCATATGCGCGAACGGACGAG
CGAAATCCGATTCCTGGTGGACGAGTTGAATCGCCAGAAGAAGACCGCCG
CCCTGGAGGATGAGGCCTTGAACACCTATCGCAATCGCGTGCTGAACTGC
ATCGAGTTCCTGAAGGACAAGTCGCTGGCCATTTGCAAGCAGTGCCTGAT
CCTACGCGAAGGTCGGATCGGTGTGGATTTGTGCGACGACGAGGTGGACC
GCTCGCTGCGCCGTGAGCTCAAGGTGATCAAGGGCTGTCAGGGATTGGCC
GATGCCGCCCTCAAGGAAGCCGAGGAGCAGATCCGCAAGCTGCGCGCCGC
CATCTATCTGCTCGATCAGGATTTGGCCGCCAAGGATAAGTCACTGGCCA
TCGACGAGAAGAACCTGAAGCTCAAGGAGTTCCAGCACGACCTGGCTAAG
GGACAGGATTTGTCCAAACAGCATTGCCAATTTTCGCTGACCGAGTGGCA
GGCGCAGACGTACGAGAATCTGGAGGCCAACGCCAAGGCGCTGGTGTCCG
CCGGTCAGCTGCGGGCCTACATCGATTTGCTGCTGAAGCAGGTGTGCGAG
GATATGCAGAACCAGACGGACAGGACCAACGAGGCCTTCGAGCGAAGGAT
CTCGGAGACGAAGCACGTGAAACAGTGTTTGGAGAACAAGCACAAGGACA
CCATGGATCACATCCATCAGGTGCAGCGCAACATGACCGAGCTGGAGAAG
GAGATGATGGACAAGCAGCGGGCCATTACACTGTGCCAGACGCGGCTCAG
CAATCGCGCCCATCGTCCTGGCCTGGAGCTGACCTGCGACATGGTCCAGG
ATGCGCTTTACAACGAACTGCAGGCGCTGAAGGCATCCGTATGCAAGCTC
AATCAGAAGCTGAACGAGAACAAGGCATCCATGCGCTACCTGATGCACGT
CCAGGTGATGCAGGAGGAGGAGATCAACATCAAGGCGAACACCTGCAAGA
TCGACGAGGTCGACTGCATGACCCTGCGACAGGCCCTGAAGTACCAAACA
TTTTAGTCGGGCAGCACTACATCCAGTACAGCACCAGTCCAGTAGTCGCC
ACACAGCCCAGCCACCAATAATCAAATTAAAATCTAATTATTAGATGCAT
GTGCATTTCGTGTTCGATCCCAAATTACTTAATAAATTGAAATTCACTTT
CGATTTCCAGTTACCAAAAAAAAAAAAAAAAAAAAAAAA

AT25102.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:29:06
Subject Length Description Subject Range Query Range Score Percent Strand
Tektin-C-RA 1654 Tektin-C-RA 135..1653 1..1519 7505 99.6 Plus
Tektin-C.a 1539 Tektin-C.a 94..1534 79..1519 7115 99.5 Plus
Tektin-C-RB 1597 Tektin-C-RB 152..1592 79..1519 7115 99.5 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:32:39
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 5786910..5787649 1515..776 3655 99.6 Minus
chr3L 24539361 chr3L 5788052..5788564 776..264 2475 98.8 Minus
chr3L 24539361 chr3L 5788632..5788895 264..1 1305 99.6 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:58:17 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:32:37
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 5794401..5795144 1519..776 3690 99.7 Minus
3L 28110227 3L 5795549..5796061 776..264 2505 99.2 Minus
3L 28110227 3L 5796129..5796392 264..1 1320 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:57:41
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 5787501..5788244 1519..776 3690 99.7 Minus
3L 28103327 3L 5788649..5789161 776..264 2505 99.2 Minus
3L 28103327 3L 5789229..5789492 264..1 1320 100 Minus
Blast to na_te.dros performed on 2019-03-16 05:32:37 has no hits.

AT25102.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:33:51 Download gff for AT25102.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 5786910..5787648 777..1515 99 <- Minus
chr3L 5788052..5788564 264..776 98 <- Minus
chr3L 5788633..5788895 1..263 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:20:51 Download gff for AT25102.complete
Subject Subject Range Query Range Percent Splice Strand
Tektin-C-RB 136..1413 79..1356 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:46:20 Download gff for AT25102.complete
Subject Subject Range Query Range Percent Splice Strand
Tektin-C-RB 136..1413 79..1356 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:42:45 Download gff for AT25102.complete
Subject Subject Range Query Range Percent Splice Strand
Tektin-C-RA 1..1266 91..1356 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:14:37 Download gff for AT25102.complete
Subject Subject Range Query Range Percent Splice Strand
Tektin-C-RB 136..1413 79..1356 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:04:59 Download gff for AT25102.complete
Subject Subject Range Query Range Percent Splice Strand
Tektin-C-RA 1..1266 91..1356 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:10:40 Download gff for AT25102.complete
Subject Subject Range Query Range Percent Splice Strand
Tektin-C-RA 10..1524 1..1515 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:46:19 Download gff for AT25102.complete
Subject Subject Range Query Range Percent Splice Strand
Tektin-C-RA 10..1524 1..1515 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:42:45 Download gff for AT25102.complete
Subject Subject Range Query Range Percent Splice Strand
Tektin-C-RA 10..1524 1..1515 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:14:37 Download gff for AT25102.complete
Subject Subject Range Query Range Percent Splice Strand
Tektin-C-RA 10..1524 1..1515 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:04:59 Download gff for AT25102.complete
Subject Subject Range Query Range Percent Splice Strand
Tektin-C-RA 10..1524 1..1515 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:33:51 Download gff for AT25102.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5794405..5795143 777..1515 99 <- Minus
3L 5795549..5796061 264..776 99 <- Minus
3L 5796130..5796392 1..263 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:33:51 Download gff for AT25102.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5794405..5795143 777..1515 99 <- Minus
3L 5795549..5796061 264..776 99 <- Minus
3L 5796130..5796392 1..263 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:33:51 Download gff for AT25102.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5794405..5795143 777..1515 99 <- Minus
3L 5795549..5796061 264..776 99 <- Minus
3L 5796130..5796392 1..263 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:42:45 Download gff for AT25102.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 5787505..5788243 777..1515 99 <- Minus
arm_3L 5788649..5789161 264..776 99 <- Minus
arm_3L 5789230..5789492 1..263 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:48:20 Download gff for AT25102.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5787505..5788243 777..1515 99 <- Minus
3L 5788649..5789161 264..776 99 <- Minus
3L 5789230..5789492 1..263 100   Minus

AT25102.pep Sequence

Translation from 90 to 1355

> AT25102.pep
MLPNLKSRRISGLQLAGKHLGPVAKCPPRYSEEDWDYNNKIKFRITCDQE
KLAERIVEESRRVVDETKDTTKNWQREVEHHMRERTSEIRFLVDELNRQK
KTAALEDEALNTYRNRVLNCIEFLKDKSLAICKQCLILREGRIGVDLCDD
EVDRSLRRELKVIKGCQGLADAALKEAEEQIRKLRAAIYLLDQDLAAKDK
SLAIDEKNLKLKEFQHDLAKGQDLSKQHCQFSLTEWQAQTYENLEANAKA
LVSAGQLRAYIDLLLKQVCEDMQNQTDRTNEAFERRISETKHVKQCLENK
HKDTMDHIHQVQRNMTELEKEMMDKQRAITLCQTRLSNRAHRPGLELTCD
MVQDALYNELQALKASVCKLNQKLNENKASMRYLMHVQVMQEEEINIKAN
TCKIDEVDCMTLRQALKYQTF*

AT25102.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:15:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10443-PA 421 GF10443-PA 1..421 1..421 2209 98.8 Plus
Dana\GF20933-PA 604 GF20933-PA 186..597 1..417 323 26 Plus
Dana\GF14924-PA 583 GF14924-PA 285..569 130..413 189 24.9 Plus
Dana\GF13562-PA 433 GF13562-PA 113..370 128..384 183 24.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:15:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14110-PA 421 GG14110-PA 1..421 1..421 2227 100 Plus
Dere\GG17527-PA 601 GG17527-PA 183..594 1..417 322 25.7 Plus
Dere\GG25176-PA 585 GG25176-PA 286..570 130..413 191 24.9 Plus
Dere\GG17913-PA 585 GG17913-PA 286..570 130..413 190 24.9 Plus
Dere\GG22824-PA 432 GG22824-PA 114..370 129..384 187 24.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:15:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22217-PA 421 GH22217-PA 1..421 1..421 2148 95.2 Plus
Dgri\GH17037-PA 421 GH17037-PA 1..421 1..421 2148 95.2 Plus
Dgri\GH24869-PA 595 GH24869-PA 177..588 1..417 305 24.8 Plus
Dgri\GH10383-PA 585 GH10383-PA 186..570 29..413 216 23.5 Plus
Dgri\GH22718-PA 433 GH22718-PA 114..375 129..388 173 24.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:04:39
Subject Length Description Subject Range Query Range Score Percent Strand
Tektin-C-PD 421 CG10541-PD 1..421 1..421 2176 100 Plus
Tektin-C-PC 421 CG10541-PC 1..421 1..421 2176 100 Plus
Tektin-C-PA 421 CG10541-PA 1..421 1..421 2176 100 Plus
CG32820-PB 520 CG32820-PB 125..511 29..415 375 26.2 Plus
CG17450-PC 520 CG17450-PC 125..511 29..415 375 26.2 Plus
CG17450-PA 520 CG17450-PA 125..511 29..415 375 26.2 Plus
CG32819-PB 520 CG32819-PB 125..511 29..415 375 26.2 Plus
CG32820-PA 601 CG32820-PA 206..592 29..415 375 26.2 Plus
CG17450-PB 601 CG17450-PB 206..592 29..415 375 26.2 Plus
CG32819-PA 601 CG32819-PA 206..592 29..415 375 26.2 Plus
CG3085-PB 432 CG3085-PB 20..402 34..417 251 21.8 Plus
CG3085-PA 432 CG3085-PA 20..402 34..417 251 21.8 Plus
Tektin-A-PB 585 CG4767-PB 186..570 29..413 246 23.6 Plus
Tektin-A-PA 585 CG4767-PA 186..570 29..413 246 23.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:15:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12041-PA 421 GI12041-PA 1..421 1..421 2150 95.7 Plus
Dmoj\GI14700-PA 596 GI14700-PA 178..589 1..417 330 25.2 Plus
Dmoj\GI17364-PA 586 GI17364-PA 209..571 36..413 201 24.3 Plus
Dmoj\GI18504-PA 433 GI18504-PA 113..377 128..390 179 24.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:15:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21420-PA 421 GL21420-PA 1..421 1..421 2179 97.1 Plus
Dper\GL15298-PA 586 GL15298-PA 287..571 130..413 203 26 Plus
Dper\GL10775-PA 433 GL10775-PA 113..406 128..421 193 24.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:15:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10385-PA 421 GA10385-PA 1..421 1..421 2181 97.4 Plus
Dpse\GA22889-PA 488 GA22889-PA 126..481 62..417 273 25.6 Plus
Dpse\GA18416-PA 586 GA18416-PA 287..571 130..413 203 26 Plus
Dpse\GA15915-PA 433 GA15915-PA 113..406 128..421 193 24.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:15:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13895-PA 421 GM13895-PA 1..421 1..421 2227 100 Plus
Dsec\GM13535-PA 589 GM13535-PA 185..582 1..417 272 24.3 Plus
Dsec\GM18638-PA 585 GM18638-PA 286..570 130..413 193 25.6 Plus
Dsec\GM15983-PA 432 GM15983-PA 114..370 129..384 188 24.6 Plus
Dsec\GM22611-PA 130 GM22611-PA 6..122 307..416 155 33.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:15:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17596-PA 421 GD17596-PA 1..421 1..421 2163 97.9 Plus
Dsim\GD15491-PA 605 GD15491-PA 187..598 1..417 322 25.7 Plus
Dsim\GD24023-PA 385 GD24023-PA 86..370 130..413 193 25.6 Plus
Dsim\GD11736-PA 432 GD11736-PA 114..370 129..384 184 24.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:15:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13311-PA 421 GJ13311-PA 1..421 1..421 2152 96.2 Plus
Dvir\GJ17002-PA 596 GJ17002-PA 178..589 1..417 330 25.7 Plus
Dvir\GJ18038-PA 586 GJ18038-PA 187..571 29..413 221 24 Plus
Dvir\GJ21366-PA 433 GJ21366-PA 113..370 128..384 179 25.4 Plus
Dvir\GJ21364-PA 425 GJ21364-PA 3..362 25..384 171 22.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:15:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17535-PA 421 GK17535-PA 1..421 1..421 2179 97.4 Plus
Dwil\GK25605-PA 607 GK25605-PA 189..600 1..417 316 25.7 Plus
Dwil\GK24269-PA 582 GK24269-PA 183..567 29..413 200 22.8 Plus
Dwil\GK19550-PA 433 GK19550-PA 113..406 128..421 184 23.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:15:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20534-PA 421 GE20534-PA 1..421 1..421 2227 100 Plus
Dyak\GE15287-PA 601 GE15287-PA 183..594 1..417 322 25.7 Plus
Dyak\GE21166-PA 585 GE21166-PA 286..570 130..413 192 25.3 Plus
Dyak\GE14259-PA 432 GE14259-PA 114..370 129..384 183 24.2 Plus

AT25102.hyp Sequence

Translation from 90 to 1355

> AT25102.hyp
MLPNLKSRRISGLQLAGKHLGPVAKCPPRYSEEDWDYNNKIKFRITCDQE
KLAERIVEESRRVVDETKDTTKNWQREVEHHMRERTSEIRFLVDELNRQK
KTAALEDEALNTYRNRVLNCIEFLKDKSLAICKQCLILREGRIGVDLCDD
EVDRSLRRELKVIKGCQGLADAALKEAEEQIRKLRAAIYLLDQDLAAKDK
SLAIDEKNLKLKEFQHDLAKGQDLSKQHCQFSLTEWQAQTYENLEANAKA
LVSAGQLRAYIDLLLKQVCEDMQNQTDRTNEAFERRISETKHVKQCLENK
HKDTMDHIHQVQRNMTELEKEMMDKQRAITLCQTRLSNRAHRPGLELTCD
MVQDALYNELQALKASVCKLNQKLNENKASMRYLMHVQVMQEEEINIKAN
TCKIDEVDCMTLRQALKYQTF*

AT25102.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:14:59
Subject Length Description Subject Range Query Range Score Percent Strand
Tektin-C-PD 421 CG10541-PD 1..421 1..421 2176 100 Plus
Tektin-C-PC 421 CG10541-PC 1..421 1..421 2176 100 Plus
Tektin-C-PA 421 CG10541-PA 1..421 1..421 2176 100 Plus
CG32820-PB 520 CG32820-PB 125..511 29..415 375 26.2 Plus
CG32819-PB 520 CG32819-PB 125..511 29..415 375 26.2 Plus